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LOCUS XM_059366474 3127 bp mRNA linear INV 02-SEP-2023 chain (LOC106090288), transcript variant X15, mRNA. ACCESSION XM_059366474 VERSION XM_059366474.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3127 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3127 /gene="LOC106090288" /note="cytoplasmic dynein 1 intermediate chain; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins" /db_xref="GeneID:106090288" CDS 204..2066 /gene="LOC106090288" /codon_start=1 /product="cytoplasmic dynein 1 intermediate chain isoform X14" /protein_id="XP_059222457.1" /db_xref="GeneID:106090288" /translation="MDRKAELERKKARLAALREEKDRRRREKEMKDMEELAVRSSEKD QRKDLDEMLSSLGVAPVSEVLTSLSSVNSLNSDNSNTQTPDVSLQTNMNGTSAGKKPL NLSVYSVQATNIPPKETLTYSKQTQTQSTGGHERDAHATDYYGDDEESSLPHMDGFTS KLPPGYLTHGLPTVKDVAPAITPMEQKKEQEEKKEIKELSEEQKQMIILSEDFQKFVL RAGRFMERALSENVDIYLDYIGGGDNEEANDEKSHARLSLNRVFYDDRWSKNRCITCM DWSTHFPELVAASYHNNEESPNEPDGVVMVWNTKFKKQTPEDVFHCQSAVMSTCFAKF NPNLILGGTYSGQVVLWDNRVQKRTPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISI SSDGKLCSWSLDMLSQPQDTLELQQSQKKPIAITCMAFPANEINSLVMGSEDGYVYSA SRHGLRSGVNETFEKHIGPVTGISTHYNQSSPDFGHLFLTSSIDWTIKLWSLKDTKPL YSFEDNSDYVMDVAWSPIHPALFAAVDGSGRLDLWNLNQDTEVPTASVIVDGAPALNR VSWMANGHHVTVGDDSGRLYVYDVAEHLAQPSRDEWSRFNATLNELKMNQSDEV" polyA_site 3127 /gene="LOC106090288" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tattgaaata atcaatactt cacaactcta ggaaactcgc aaaagtattg tgcacggaaa 61 aatatgtggt tttaagtact taatcgaagc ataaatatat aaatttcata tcgaaaagct 121 gcaaagagaa caccgccaag tttgagatta tctaaagatc ataaacccct ctaaacacca 181 aaagtcacaa aaatcctaaa gacatggatc gcaaagctga attggagcgc aagaaagcca 241 ggttagcggc tttgcgcgaa gaaaaagaca gacgtcggcg tgaaaaagaa atgaaagata 301 tggaggaact tgctgtaaga agctcagaaa aggatcaaag aaaggatttg gatgaaatgc 361 tttcttcatt gggtgtggca ccagtttctg aagttcttac ttcattgtct tcggtaaatt 421 cattgaattc ggacaactct aatactcaga caccagatgt cagtctgcaa acgaatatga 481 atggcactag tgctggcaag aaacccttaa acttgagtgt ctatagtgtt caggccacta 541 acattccacc aaaagaaaca ctcacctatt ctaaacagac ccaaacacaa agtaccggtg 601 gccatgagcg tgatgctcat gctacggact attatggaga tgacgaagag agttcgctgc 661 cacacatgga tggattcacc tcgaagttac cgcctggcta tttgacacat ggtctgccca 721 cagtgaaaga tgttgcaccg gccataacgc ccatggaaca aaagaaggag caagaggaga 781 agaaagagat caaggaactg tcggaggaac aaaaacaaat gatcatctta tctgaggact 841 tccaaaagtt tgttttgcgt gctggccgtt ttatggagcg ggctctctca gagaatgtcg 901 acatctattt ggattacatt ggcggtggtg acaatgagga ggctaatgat gagaaatctc 961 atgcacgttt atcattgaat cgcgttttct atgatgatcg ctggtcgaaa aatcgttgca 1021 taacatgcat ggattggtct acgcattttc cggaattggt ggcagcttcc tatcataaca 1081 atgaagaaag tcctaacgaa cccgacggtg ttgttatggt ctggaatacc aaatttaaga 1141 aacaaacccc cgaagatgtt ttccattgtc aaagtgctgt tatgtccaca tgttttgcta 1201 aattcaatcc caatctcatt ttgggtggca cctattccgg tcaagtagtt ctgtgggata 1261 atcgtgtaca gaaacgtaca cccattcaac gtacccctct gagtgctgct gctcacacac 1321 atccagtgta ttgtttgcaa atggtgggaa cacaaaatgc tcacaatgtc atctcaatat 1381 catccgatgg caaattgtgt tcgtggagtt tggatatgtt gtcacaacct caggatacgt 1441 tagaattgca acagagccag aagaaaccta ttgccattac gtgtatggca tttccggcta 1501 atgagattaa cagtttggtg atgggcagtg aagatggtta tgtttactca gcttctcgcc 1561 atggcttgag atctggtgta aatgagacat ttgagaagca tatcggtcct gtcactggca 1621 tttctactca ctacaatcaa tcatcacctg attttggcca tttgttcctt acctcatcca 1681 tcgattggac aatcaaattg tggtcgctga aggacaccaa accgctgtac tcattcgagg 1741 acaattccga ttatgttatg gatgtggcct ggtctcccat tcatcctgct ctgtttgctg 1801 ctgtcgatgg tagcggccgc cttgatttat ggaatctaaa tcaagacacc gaagtaccca 1861 cagcatcggt tattgttgat ggtgcgccag ctctcaatcg tgtatcgtgg atggcaaatg 1921 gccatcatgt gactgtgggc gatgacagtg gccgcctgta tgtctatgat gtggctgagc 1981 atttggccca accatcgcgg gatgaatggt ctagatttaa tgccacactc aacgagctca 2041 aaatgaatca aagcgacgag gtttaagcac acacacacac aaacacaaaa tgtgggggac 2101 tttgttaagt cctgctacta caattctatt tacagcttta aaaagactat acctaaagtt 2161 gtttaaatgg caattttact tttgcattag cattatctct tcaatttatg ctttctttaa 2221 ctctatcccc ccaccctcca actgtctccc tctaaactac ataaatgagt tttctagaaa 2281 tattgtctta actctctact tctatccatt agtcatgccc tatataaaaa aaatcgcggt 2341 tttcattttt ctttcatttt ttaaggtttg tggctgggtt tacttttctc caaggatcat 2401 tgatttggtg ttgatgattt tgtgaggaaa agcctaccca gtttcactcc ttagtagttg 2461 tatattttaa tttttctctt tgtattaaac atcccccttg gtttttaagt attacaaaat 2521 aagttcattt gaaatgaaaa aagatttaac taactgtgta ttaaataaac tatgtatgat 2581 aaatttgtta aacaatttta ttttatttat gtttttatat atgtgaattt tatttaacac 2641 aagaaaagaa agaaaaagca acaacaaaaa atctccgata ttatcttttt acagacactt 2701 gttttcattt actctattct aaattaattt ttttatggta catatataca tatataaata 2761 aatatattta attatacaag gctgtaacca cctgtggttg tggccaacaa atttatatta 2821 accccgccct cactccccat ggaacaaaca atgaaacaaa tatgaacttt atggcagttt 2881 tctctaagaa atcatagtgg aagagttttt ttcgtttttg gttaagaaat tgcattaagt 2941 acgattgtca agaccctaaa ctaatgatta ataataattg tatggagtta tggacagtta 3001 ataaggcgta cgtcgagtac acagtaagat agtcgtctac atacgaaaaa gaaaacacta 3061 cacaaaatat ttattgaaac taatctaata aatataccag catatggaaa ttattggaaa 3121 ttattaa