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LOCUS XM_059366473 3175 bp mRNA linear INV 02-SEP-2023 chain (LOC106090288), transcript variant X12, mRNA. ACCESSION XM_059366473 VERSION XM_059366473.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3175 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3175 /gene="LOC106090288" /note="cytoplasmic dynein 1 intermediate chain; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins" /db_xref="GeneID:106090288" CDS 204..2114 /gene="LOC106090288" /codon_start=1 /product="cytoplasmic dynein 1 intermediate chain isoform X11" /protein_id="XP_059222456.1" /db_xref="GeneID:106090288" /translation="MDRKAELERKKARLAALREEKDRRRREKEMKDMEELAVRSSEKD QRKDLDEMLSSLGVAPVSEVLTSLSSVNSLNSDNSNTQTPDVSLQTNMNGTSAGKKPL NLSVYSVQATNIPPKETLTYSKQTQTQSTGGHERDAHATDYYDEYNLNPGLEWEDEFT GDDEESSLPHMDGFTSKLPPGYLTHGLPTVKDVAPAITPMEQKKEQEEKKEIKELSEE QKQMIILSEDFQKFVLRAGRFMERALSENVDIYLDYIGGGDNEEANDEKSHARLSLNR VFYDDRWSKNRCITCMDWSTHFPELVAASYHNNEESPNEPDGVVMVWNTKFKKQTPED VFHCQSAVMSTCFAKFNPNLILGGTYSGQVVLWDNRVQKRTPIQRTPLSAAAHTHPVY CLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQQSQKKPIAITCMAFPANE INSLVMGSEDGYVYSASRHGLRSGVNETFEKHIGPVTGISTHYNQSSPDFGHLFLTSS IDWTIKLWSLKDTKPLYSFEDNSDYVMDVAWSPIHPALFAAVDGSGRLDLWNLNQDTE VPTASVIVDGAPALNRVSWMANGHHVTVGDDSGRLYVYDVAEHLAQPSRDEWSRFNAT LNELKMNQSDEV" polyA_site 3175 /gene="LOC106090288" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tattgaaata atcaatactt cacaactcta ggaaactcgc aaaagtattg tgcacggaaa 61 aatatgtggt tttaagtact taatcgaagc ataaatatat aaatttcata tcgaaaagct 121 gcaaagagaa caccgccaag tttgagatta tctaaagatc ataaacccct ctaaacacca 181 aaagtcacaa aaatcctaaa gacatggatc gcaaagctga attggagcgc aagaaagcca 241 ggttagcggc tttgcgcgaa gaaaaagaca gacgtcggcg tgaaaaagaa atgaaagata 301 tggaggaact tgctgtaaga agctcagaaa aggatcaaag aaaggatttg gatgaaatgc 361 tttcttcatt gggtgtggca ccagtttctg aagttcttac ttcattgtct tcggtaaatt 421 cattgaattc ggacaactct aatactcaga caccagatgt cagtctgcaa acgaatatga 481 atggcactag tgctggcaag aaacccttaa acttgagtgt ctatagtgtt caggccacta 541 acattccacc aaaagaaaca ctcacctatt ctaaacagac ccaaacacaa agtaccggtg 601 gccatgagcg tgatgctcat gctacggact attatgatga atacaatctt aatccgggtt 661 tagaatggga ggatgagttc acaggagatg acgaagagag ttcgctgcca cacatggatg 721 gattcacctc gaagttaccg cctggctatt tgacacatgg tctgcccaca gtgaaagatg 781 ttgcaccggc cataacgccc atggaacaaa agaaggagca agaggagaag aaagagatca 841 aggaactgtc ggaggaacaa aaacaaatga tcatcttatc tgaggacttc caaaagtttg 901 ttttgcgtgc tggccgtttt atggagcggg ctctctcaga gaatgtcgac atctatttgg 961 attacattgg cggtggtgac aatgaggagg ctaatgatga gaaatctcat gcacgtttat 1021 cattgaatcg cgttttctat gatgatcgct ggtcgaaaaa tcgttgcata acatgcatgg 1081 attggtctac gcattttccg gaattggtgg cagcttccta tcataacaat gaagaaagtc 1141 ctaacgaacc cgacggtgtt gttatggtct ggaataccaa atttaagaaa caaacccccg 1201 aagatgtttt ccattgtcaa agtgctgtta tgtccacatg ttttgctaaa ttcaatccca 1261 atctcatttt gggtggcacc tattccggtc aagtagttct gtgggataat cgtgtacaga 1321 aacgtacacc cattcaacgt acccctctga gtgctgctgc tcacacacat ccagtgtatt 1381 gtttgcaaat ggtgggaaca caaaatgctc acaatgtcat ctcaatatca tccgatggca 1441 aattgtgttc gtggagtttg gatatgttgt cacaacctca ggatacgtta gaattgcaac 1501 agagccagaa gaaacctatt gccattacgt gtatggcatt tccggctaat gagattaaca 1561 gtttggtgat gggcagtgaa gatggttatg tttactcagc ttctcgccat ggcttgagat 1621 ctggtgtaaa tgagacattt gagaagcata tcggtcctgt cactggcatt tctactcact 1681 acaatcaatc atcacctgat tttggccatt tgttccttac ctcatccatc gattggacaa 1741 tcaaattgtg gtcgctgaag gacaccaaac cgctgtactc attcgaggac aattccgatt 1801 atgttatgga tgtggcctgg tctcccattc atcctgctct gtttgctgct gtcgatggta 1861 gcggccgcct tgatttatgg aatctaaatc aagacaccga agtacccaca gcatcggtta 1921 ttgttgatgg tgcgccagct ctcaatcgtg tatcgtggat ggcaaatggc catcatgtga 1981 ctgtgggcga tgacagtggc cgcctgtatg tctatgatgt ggctgagcat ttggcccaac 2041 catcgcggga tgaatggtct agatttaatg ccacactcaa cgagctcaaa atgaatcaaa 2101 gcgacgaggt ttaagcacac acacacacaa acacaaaatg tgggggactt tgttaagtcc 2161 tgctactaca attctattta cagctttaaa aagactatac ctaaagttgt ttaaatggca 2221 attttacttt tgcattagca ttatctcttc aatttatgct ttctttaact ctatcccccc 2281 accctccaac tgtctccctc taaactacat aaatgagttt tctagaaata ttgtcttaac 2341 tctctacttc tatccattag tcatgcccta tataaaaaaa atcgcggttt tcatttttct 2401 ttcatttttt aaggtttgtg gctgggttta cttttctcca aggatcattg atttggtgtt 2461 gatgattttg tgaggaaaag cctacccagt ttcactcctt agtagttgta tattttaatt 2521 tttctctttg tattaaacat cccccttggt ttttaagtat tacaaaataa gttcatttga 2581 aatgaaaaaa gatttaacta actgtgtatt aaataaacta tgtatgataa atttgttaaa 2641 caattttatt ttatttatgt ttttatatat gtgaatttta tttaacacaa gaaaagaaag 2701 aaaaagcaac aacaaaaaat ctccgatatt atctttttac agacacttgt tttcatttac 2761 tctattctaa attaattttt ttatggtaca tatatacata tataaataaa tatatttaat 2821 tatacaaggc tgtaaccacc tgtggttgtg gccaacaaat ttatattaac cccgccctca 2881 ctccccatgg aacaaacaat gaaacaaata tgaactttat ggcagttttc tctaagaaat 2941 catagtggaa gagttttttt cgtttttggt taagaaattg cattaagtac gattgtcaag 3001 accctaaact aatgattaat aataattgta tggagttatg gacagttaat aaggcgtacg 3061 tcgagtacac agtaagatag tcgtctacat acgaaaaaga aaacactaca caaaatattt 3121 attgaaacta atctaataaa tataccagca tatggaaatt attggaaatt attaa