Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_059366472 3190 bp mRNA linear INV 02-SEP-2023 chain (LOC106090288), transcript variant X10, mRNA. ACCESSION XM_059366472 VERSION XM_059366472.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3190 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3190 /gene="LOC106090288" /note="cytoplasmic dynein 1 intermediate chain; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins" /db_xref="GeneID:106090288" CDS 204..2129 /gene="LOC106090288" /codon_start=1 /product="cytoplasmic dynein 1 intermediate chain isoform X9" /protein_id="XP_059222455.1" /db_xref="GeneID:106090288" /translation="MDRKAELERKKARLAALREEKDRRRREKEMKDMEELAVRSSEKD QRKDLDEMLSSLGVAPVSEVLTSLSSVNSLNSDNSNTQTPDVSLQTNMNGTSAGKKPL NLSVYSVQATNIPPKETLTYSKQTQTQSTGGHERDVLSCHSSPLSGYMEDWWRPRKAH ATDYYGDDEESSLPHMDGFTSKLPPGYLTHGLPTVKDVAPAITPMEQKKEQEEKKEIK ELSEEQKQMIILSEDFQKFVLRAGRFMERALSENVDIYLDYIGGGDNEEANDEKSHAR LSLNRVFYDDRWSKNRCITCMDWSTHFPELVAASYHNNEESPNEPDGVVMVWNTKFKK QTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQVVLWDNRVQKRTPIQRTPLSAAAH THPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQQSQKKPIAITCMA FPANEINSLVMGSEDGYVYSASRHGLRSGVNETFEKHIGPVTGISTHYNQSSPDFGHL FLTSSIDWTIKLWSLKDTKPLYSFEDNSDYVMDVAWSPIHPALFAAVDGSGRLDLWNL NQDTEVPTASVIVDGAPALNRVSWMANGHHVTVGDDSGRLYVYDVAEHLAQPSRDEWS RFNATLNELKMNQSDEV" polyA_site 3190 /gene="LOC106090288" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tattgaaata atcaatactt cacaactcta ggaaactcgc aaaagtattg tgcacggaaa 61 aatatgtggt tttaagtact taatcgaagc ataaatatat aaatttcata tcgaaaagct 121 gcaaagagaa caccgccaag tttgagatta tctaaagatc ataaacccct ctaaacacca 181 aaagtcacaa aaatcctaaa gacatggatc gcaaagctga attggagcgc aagaaagcca 241 ggttagcggc tttgcgcgaa gaaaaagaca gacgtcggcg tgaaaaagaa atgaaagata 301 tggaggaact tgctgtaaga agctcagaaa aggatcaaag aaaggatttg gatgaaatgc 361 tttcttcatt gggtgtggca ccagtttctg aagttcttac ttcattgtct tcggtaaatt 421 cattgaattc ggacaactct aatactcaga caccagatgt cagtctgcaa acgaatatga 481 atggcactag tgctggcaag aaacccttaa acttgagtgt ctatagtgtt caggccacta 541 acattccacc aaaagaaaca ctcacctatt ctaaacagac ccaaacacaa agtaccggtg 601 gccatgagcg tgatgttctt tcttgccact cctcacctct gtcaggatat atggaggatt 661 ggtggagacc acgcaaagct catgctacgg actattatgg agatgacgaa gagagttcgc 721 tgccacacat ggatggattc acctcgaagt taccgcctgg ctatttgaca catggtctgc 781 ccacagtgaa agatgttgca ccggccataa cgcccatgga acaaaagaag gagcaagagg 841 agaagaaaga gatcaaggaa ctgtcggagg aacaaaaaca aatgatcatc ttatctgagg 901 acttccaaaa gtttgttttg cgtgctggcc gttttatgga gcgggctctc tcagagaatg 961 tcgacatcta tttggattac attggcggtg gtgacaatga ggaggctaat gatgagaaat 1021 ctcatgcacg tttatcattg aatcgcgttt tctatgatga tcgctggtcg aaaaatcgtt 1081 gcataacatg catggattgg tctacgcatt ttccggaatt ggtggcagct tcctatcata 1141 acaatgaaga aagtcctaac gaacccgacg gtgttgttat ggtctggaat accaaattta 1201 agaaacaaac ccccgaagat gttttccatt gtcaaagtgc tgttatgtcc acatgttttg 1261 ctaaattcaa tcccaatctc attttgggtg gcacctattc cggtcaagta gttctgtggg 1321 ataatcgtgt acagaaacgt acacccattc aacgtacccc tctgagtgct gctgctcaca 1381 cacatccagt gtattgtttg caaatggtgg gaacacaaaa tgctcacaat gtcatctcaa 1441 tatcatccga tggcaaattg tgttcgtgga gtttggatat gttgtcacaa cctcaggata 1501 cgttagaatt gcaacagagc cagaagaaac ctattgccat tacgtgtatg gcatttccgg 1561 ctaatgagat taacagtttg gtgatgggca gtgaagatgg ttatgtttac tcagcttctc 1621 gccatggctt gagatctggt gtaaatgaga catttgagaa gcatatcggt cctgtcactg 1681 gcatttctac tcactacaat caatcatcac ctgattttgg ccatttgttc cttacctcat 1741 ccatcgattg gacaatcaaa ttgtggtcgc tgaaggacac caaaccgctg tactcattcg 1801 aggacaattc cgattatgtt atggatgtgg cctggtctcc cattcatcct gctctgtttg 1861 ctgctgtcga tggtagcggc cgccttgatt tatggaatct aaatcaagac accgaagtac 1921 ccacagcatc ggttattgtt gatggtgcgc cagctctcaa tcgtgtatcg tggatggcaa 1981 atggccatca tgtgactgtg ggcgatgaca gtggccgcct gtatgtctat gatgtggctg 2041 agcatttggc ccaaccatcg cgggatgaat ggtctagatt taatgccaca ctcaacgagc 2101 tcaaaatgaa tcaaagcgac gaggtttaag cacacacaca cacaaacaca aaatgtgggg 2161 gactttgtta agtcctgcta ctacaattct atttacagct ttaaaaagac tatacctaaa 2221 gttgtttaaa tggcaatttt acttttgcat tagcattatc tcttcaattt atgctttctt 2281 taactctatc cccccaccct ccaactgtct ccctctaaac tacataaatg agttttctag 2341 aaatattgtc ttaactctct acttctatcc attagtcatg ccctatataa aaaaaatcgc 2401 ggttttcatt tttctttcat tttttaaggt ttgtggctgg gtttactttt ctccaaggat 2461 cattgatttg gtgttgatga ttttgtgagg aaaagcctac ccagtttcac tccttagtag 2521 ttgtatattt taatttttct ctttgtatta aacatccccc ttggttttta agtattacaa 2581 aataagttca tttgaaatga aaaaagattt aactaactgt gtattaaata aactatgtat 2641 gataaatttg ttaaacaatt ttattttatt tatgttttta tatatgtgaa ttttatttaa 2701 cacaagaaaa gaaagaaaaa gcaacaacaa aaaatctccg atattatctt tttacagaca 2761 cttgttttca tttactctat tctaaattaa tttttttatg gtacatatat acatatataa 2821 ataaatatat ttaattatac aaggctgtaa ccacctgtgg ttgtggccaa caaatttata 2881 ttaaccccgc cctcactccc catggaacaa acaatgaaac aaatatgaac tttatggcag 2941 ttttctctaa gaaatcatag tggaagagtt tttttcgttt ttggttaaga aattgcatta 3001 agtacgattg tcaagaccct aaactaatga ttaataataa ttgtatggag ttatggacag 3061 ttaataaggc gtacgtcgag tacacagtaa gatagtcgtc tacatacgaa aaagaaaaca 3121 ctacacaaaa tatttattga aactaatcta ataaatatac cagcatatgg aaattattgg 3181 aaattattaa