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LOCUS XM_059366471 3208 bp mRNA linear INV 02-SEP-2023 chain (LOC106090288), transcript variant X7, mRNA. ACCESSION XM_059366471 VERSION XM_059366471.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3208 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3208 /gene="LOC106090288" /note="cytoplasmic dynein 1 intermediate chain; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins" /db_xref="GeneID:106090288" CDS 204..2147 /gene="LOC106090288" /codon_start=1 /product="cytoplasmic dynein 1 intermediate chain isoform X6" /protein_id="XP_059222454.1" /db_xref="GeneID:106090288" /translation="MDRKAELERKKARLAALREEKDRRRREKEMKDMEELAVRSSEKD QRKDLDEMLSSLGVAPVSEVLTSLSSVNSLNSDNSNTQTPDVSLQTNMNGTSAGKKPL NLSVYSVQATNIPPKETLTYSKQTQTQSTGGHERDGYMEDWWRPRKAHATDYYDEYNL NPGLEWEDEFTGDDEESSLPHMDGFTSKLPPGYLTHGLPTVKDVAPAITPMEQKKEQE EKKEIKELSEEQKQMIILSEDFQKFVLRAGRFMERALSENVDIYLDYIGGGDNEEAND EKSHARLSLNRVFYDDRWSKNRCITCMDWSTHFPELVAASYHNNEESPNEPDGVVMVW NTKFKKQTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQVVLWDNRVQKRTPIQRTP LSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQQSQKKPI AITCMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNETFEKHIGPVTGISTHYNQSS PDFGHLFLTSSIDWTIKLWSLKDTKPLYSFEDNSDYVMDVAWSPIHPALFAAVDGSGR LDLWNLNQDTEVPTASVIVDGAPALNRVSWMANGHHVTVGDDSGRLYVYDVAEHLAQP SRDEWSRFNATLNELKMNQSDEV" polyA_site 3208 /gene="LOC106090288" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tattgaaata atcaatactt cacaactcta ggaaactcgc aaaagtattg tgcacggaaa 61 aatatgtggt tttaagtact taatcgaagc ataaatatat aaatttcata tcgaaaagct 121 gcaaagagaa caccgccaag tttgagatta tctaaagatc ataaacccct ctaaacacca 181 aaagtcacaa aaatcctaaa gacatggatc gcaaagctga attggagcgc aagaaagcca 241 ggttagcggc tttgcgcgaa gaaaaagaca gacgtcggcg tgaaaaagaa atgaaagata 301 tggaggaact tgctgtaaga agctcagaaa aggatcaaag aaaggatttg gatgaaatgc 361 tttcttcatt gggtgtggca ccagtttctg aagttcttac ttcattgtct tcggtaaatt 421 cattgaattc ggacaactct aatactcaga caccagatgt cagtctgcaa acgaatatga 481 atggcactag tgctggcaag aaacccttaa acttgagtgt ctatagtgtt caggccacta 541 acattccacc aaaagaaaca ctcacctatt ctaaacagac ccaaacacaa agtaccggtg 601 gccatgagcg tgatggatat atggaggatt ggtggagacc acgcaaagct catgctacgg 661 actattatga tgaatacaat cttaatccgg gtttagaatg ggaggatgag ttcacaggag 721 atgacgaaga gagttcgctg ccacacatgg atggattcac ctcgaagtta ccgcctggct 781 atttgacaca tggtctgccc acagtgaaag atgttgcacc ggccataacg cccatggaac 841 aaaagaagga gcaagaggag aagaaagaga tcaaggaact gtcggaggaa caaaaacaaa 901 tgatcatctt atctgaggac ttccaaaagt ttgttttgcg tgctggccgt tttatggagc 961 gggctctctc agagaatgtc gacatctatt tggattacat tggcggtggt gacaatgagg 1021 aggctaatga tgagaaatct catgcacgtt tatcattgaa tcgcgttttc tatgatgatc 1081 gctggtcgaa aaatcgttgc ataacatgca tggattggtc tacgcatttt ccggaattgg 1141 tggcagcttc ctatcataac aatgaagaaa gtcctaacga acccgacggt gttgttatgg 1201 tctggaatac caaatttaag aaacaaaccc ccgaagatgt tttccattgt caaagtgctg 1261 ttatgtccac atgttttgct aaattcaatc ccaatctcat tttgggtggc acctattccg 1321 gtcaagtagt tctgtgggat aatcgtgtac agaaacgtac acccattcaa cgtacccctc 1381 tgagtgctgc tgctcacaca catccagtgt attgtttgca aatggtggga acacaaaatg 1441 ctcacaatgt catctcaata tcatccgatg gcaaattgtg ttcgtggagt ttggatatgt 1501 tgtcacaacc tcaggatacg ttagaattgc aacagagcca gaagaaacct attgccatta 1561 cgtgtatggc atttccggct aatgagatta acagtttggt gatgggcagt gaagatggtt 1621 atgtttactc agcttctcgc catggcttga gatctggtgt aaatgagaca tttgagaagc 1681 atatcggtcc tgtcactggc atttctactc actacaatca atcatcacct gattttggcc 1741 atttgttcct tacctcatcc atcgattgga caatcaaatt gtggtcgctg aaggacacca 1801 aaccgctgta ctcattcgag gacaattccg attatgttat ggatgtggcc tggtctccca 1861 ttcatcctgc tctgtttgct gctgtcgatg gtagcggccg ccttgattta tggaatctaa 1921 atcaagacac cgaagtaccc acagcatcgg ttattgttga tggtgcgcca gctctcaatc 1981 gtgtatcgtg gatggcaaat ggccatcatg tgactgtggg cgatgacagt ggccgcctgt 2041 atgtctatga tgtggctgag catttggccc aaccatcgcg ggatgaatgg tctagattta 2101 atgccacact caacgagctc aaaatgaatc aaagcgacga ggtttaagca cacacacaca 2161 caaacacaaa atgtggggga ctttgttaag tcctgctact acaattctat ttacagcttt 2221 aaaaagacta tacctaaagt tgtttaaatg gcaattttac ttttgcatta gcattatctc 2281 ttcaatttat gctttcttta actctatccc cccaccctcc aactgtctcc ctctaaacta 2341 cataaatgag ttttctagaa atattgtctt aactctctac ttctatccat tagtcatgcc 2401 ctatataaaa aaaatcgcgg ttttcatttt tctttcattt tttaaggttt gtggctgggt 2461 ttacttttct ccaaggatca ttgatttggt gttgatgatt ttgtgaggaa aagcctaccc 2521 agtttcactc cttagtagtt gtatatttta atttttctct ttgtattaaa catccccctt 2581 ggtttttaag tattacaaaa taagttcatt tgaaatgaaa aaagatttaa ctaactgtgt 2641 attaaataaa ctatgtatga taaatttgtt aaacaatttt attttattta tgtttttata 2701 tatgtgaatt ttatttaaca caagaaaaga aagaaaaagc aacaacaaaa aatctccgat 2761 attatctttt tacagacact tgttttcatt tactctattc taaattaatt tttttatggt 2821 acatatatac atatataaat aaatatattt aattatacaa ggctgtaacc acctgtggtt 2881 gtggccaaca aatttatatt aaccccgccc tcactcccca tggaacaaac aatgaaacaa 2941 atatgaactt tatggcagtt ttctctaaga aatcatagtg gaagagtttt tttcgttttt 3001 ggttaagaaa ttgcattaag tacgattgtc aagaccctaa actaatgatt aataataatt 3061 gtatggagtt atggacagtt aataaggcgt acgtcgagta cacagtaaga tagtcgtcta 3121 catacgaaaa agaaaacact acacaaaata tttattgaaa ctaatctaat aaatatacca 3181 gcatatggaa attattggaa attattaa