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LOCUS XM_059366470 3431 bp mRNA linear INV 02-SEP-2023 (LOC106090285), mRNA. ACCESSION XM_059366470 VERSION XM_059366470.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3431 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3431 /gene="LOC106090285" /note="dynein axonemal intermediate chain 3; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106090285" CDS 16..3357 /gene="LOC106090285" /codon_start=1 /product="dynein axonemal intermediate chain 3" /protein_id="XP_059222453.1" /db_xref="GeneID:106090285" /translation="MSETPQLEEEPKEEPEDERTKFLRINENILNWKAPAKDTDPIEH FDVTQAWDAILALPSCQEIMIQVSNQRRLNLVVGVNVTQEFPWKQIPFRSLRDHLFDE LPNGQIYHNAFQGYEADNQVLIGYVPLITQDAEDPPPGDPFVMFVDPYDAKLALVIIR NLESYERLMINKRLQRLPRAWVSLGSEDEVNLTISHRYQDPVDVEIQSVYPLNLPANK EFSFRFTKDVRDGYVELVPSESARFDNVARRRITVGIQSAMPRRDIEQQTDPTFPTNA WAQYLYEIKEDEDCLDPMSEDEDDKSKPASRAVTPEPPKPPKPPPDVSDRIQFLLKTL EFNQIDMYRNDYPLISKTSMMHHTTPSLEETLCFANISKSQDRYVCGYDWYPTLAGLI VTSYTFSTAATVESVDTKTDLIQRMVLQPNPILMWSFDDNLNYKLEFESPFEITSLSF CPYDANVLLGGASNGQLVLWDLQNRAERLDYTEMLSSSQIHYRVLINEFLKWTIQIDE DMIVMPATISRLEKSQKAQIMDIQWLGKHCSVSSFGKFTVDENAKANNLFFMTISLDG TIAFWNLEGQVNKKATPTGRKELPKALTQYESSHKGKMLVPIFTVVFTEPLTAIVADT PCFKYSPLEENRDDVRYNYRLQLLPQDAAEVRQSFIVSSFYGRLERISWQGLYAESEG REAISTSENFARVHDGPIIALKRNPFLPWLFVSIGRNVVAVWKEDYNYSPIFWRRRQN DLTAVTWSESRPAVLFLTRIDGSLEAWDILSRDDDACLNDVLGGGIITQICEHRPTEP DKLLGIGDYNSSLRMVKLPKSFYQQFSQEIKNMEKYILSEESRKKDIQAWEQEYYERN KEVIEAKKQAERDADKELERQEKEKVLQAVRKAKEEEAAKRREAPPARVTFTEQMRRQ WYEVNLKRLLNILMTRKRVNEKQLRQQTILEKERLAYEAAKKESMTNVLARVSDEVAA VRSRIYPQQIPDLKRSDIIQSTVDTILQDVESYPAFEEQIHRSLEMGDDLRHVDYAEF LYRGGQRRKNINKSLGGNTERMHWYELAREDKLLNECDWGFETFAELLHTVDVGSQPP SNVNLLATPQAQVTKGEEADVEEEG" polyA_site 3431 /gene="LOC106090285" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ataaacgcag taaaaatgtc agaaaccccg caacttgagg aggaacccaa agaagaaccg 61 gaagatgaaa gaactaaatt tctacgcatc aatgagaata tcttgaattg gaaagcacct 121 gctaaagaca cagatcccat agaacatttt gatgttaccc aggcttggga tgcaattcta 181 gcgctgccca gctgtcaaga aattatgata caagtctcca atcaaagacg cttgaacctg 241 gtggtgggag taaatgttac tcaagaattt ccctggaaac aaattccctt ccgcagttta 301 agggatcatc tctttgatga attacccaat gggcaaattt atcataatgc ctttcaaggc 361 tatgaggcag ataatcaagt tttaataggc tatgtaccgc tcataacaca agatgctgaa 421 gatcctcctc caggtgatcc ctttgtcatg tttgtcgatc cctatgatgc aaaattggct 481 ttagtcatta ttcgtaatct ggaatcctat gagcgtttga tgattaacaa acgtttgcag 541 cgattaccta gggcttgggt ttcgctgggc agtgaagatg aagtaaattt aaccatatca 601 catcgttatc aagatcctgt tgatgtggag atacaaagtg tttatccctt aaatttaccg 661 gccaataaag agttcagctt tcgttttacc aaagacgtaa gggatggcta tgtggagctg 721 gtaccctcgg agagtgcgcg ctttgacaat gtggccagac gacgcataac tgtgggcata 781 caatcggcca tgcctcgccg ggatatagag cagcagaccg atcccacatt tcccacaaat 841 gcatgggcac agtatttata tgaaataaaa gaagatgagg attgcctaga ccctatgtct 901 gaagatgagg atgataaaag caaacctgct agtagagctg ttaccccaga accgccaaaa 961 cctcctaaac cgccaccaga tgtttccgat cgtatacagt ttcttttgaa gacattggaa 1021 tttaatcaaa tcgatatgta tcgaaacgat tatcccctaa tttccaaaac ctccatgatg 1081 caccatacca caccgagtct ggaggagact ttgtgttttg ccaatatatc aaagagtcag 1141 gatagatatg tatgcggcta tgattggtat ccaacattgg caggattaat tgtaacctcg 1201 tataccttca gtacagcagc cactgtggaa tcagttgaca ccaagacgga cctcatacag 1261 cgcatggtct tacaacccaa tcccatattg atgtggagtt ttgatgacaa tctcaactat 1321 aagctggagt ttgagtctcc ttttgaaatc acctcccttt ccttctgtcc ctatgatgcc 1381 aatgtactct tgggaggagc cagtaatggc cagctagttc tgtgggatct acaaaatcgt 1441 gccgaacgct tggattatac ggaaatgttg tcatcctccc aaatacacta tagagtgctt 1501 atcaatgagt tcctgaagtg gaccatacaa atcgatgagg atatgatagt catgcctgcc 1561 acaatatcac gtctggagaa atcacaaaag gctcaaataa tggatataca atggttgggt 1621 aaacattgtt cggttagttc ctttggcaaa ttcactgtgg atgaaaatgc caaggccaat 1681 aatttgtttt tcatgacaat ttcgctggat ggcaccatag cattttggaa tttggagggc 1741 caggtgaaca aaaaggccac acccactggt cgcaaagaat tgcccaaggc tttgacacag 1801 tacgagtcca gtcataaggg taaaatgctg gtgccaatat ttacggtggt ctttacggaa 1861 cctctaactg ccatagtggc cgatacacca tgcttcaaat actctcccct ggaagagaat 1921 agagatgatg tgcgatataa ttatcgccta caattgttgc ctcaagatgc tgcagaggta 1981 cgacagtctt tcatagtctc ttcattctat ggaagattgg aacgaatctc ttggcaaggt 2041 ctttatgctg aatctgaggg acgagaagcc atatctacct cggaaaattt cgcccgtgta 2101 catgatggac ctattatagc gcttaagaga aatccctttt tgccttggct ctttgtctcc 2161 ataggtcgta atgtggtggc agtttggaaa gaggattata actattcgcc catattctgg 2221 cgcagacgcc agaatgatct gacagcggta acatggagtg aatcaagacc agcagtgtta 2281 tttttaaccc gaatcgatgg tagtctagaa gcctgggata ttttatctcg agatgatgat 2341 gcctgtttga atgatgtttt gggtggtggc ataatcactc aaatctgtga acatagaccc 2401 acggaaccgg ataaactatt gggtatagga gattataaca gcagtttgcg tatggtgaag 2461 ttgccaaaga gcttttatca acaattttct caggaaatta aaaatatgga gaaatatatt 2521 ctcagtgaag agtcccgtaa gaaggatata caagcttggg agcaggaata ttatgaacga 2581 aataaggaag tcatagaggc taagaaacaa gccgaaagag atgctgacaa agagttagag 2641 cgtcaagaga aggagaaagt tttacaggca gttcgaaaag ccaaagagga agaggcagcc 2701 aaaagaagag aagcccctcc cgctcgtgtc acattcaccg aacaaatgcg ccgccagtgg 2761 tatgaagtga atctaaaaag actgctaaac attctgatga cccgcaaaag ggtcaacgag 2821 aaacagctta ggcagcaaac catattggaa aaggaacgtc tggcctacga agcggccaaa 2881 aaagaatcaa tgaccaacgt tttggctcgc gtcagcgatg aggtagctgc ggtgcgttca 2941 cgcatatatc cccagcaaat acccgatttg aagcgcagtg atatcataca gtccacagta 3001 gatacaattt tacaagatgt cgaatcatat ccagcatttg aagagcaaat ccatagatca 3061 ttagaaatgg gagatgattt gcggcatgtg gactatgcgg aatttcttta tcgtggcggg 3121 caacgtcgta agaatatcaa caaatccttg ggtggcaata cggaacgtat gcattggtat 3181 gaattggcgc gtgaagataa actgctgaac gaatgtgatt ggggctttga aacatttgcc 3241 gagcttttgc atacagtgga tgtgggttcg cagccaccat cgaatgtaaa tttgttggca 3301 acgccacaag cacaagtgac caaaggagaa gaggccgatg ttgaagagga gggttgaaat 3361 tataagattt attcaatatt ttttgtttat tgtttttttt ttaataaata ggaactagtg 3421 accgttggaa a