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LOCUS XM_059366466 4899 bp mRNA linear INV 02-SEP-2023 with thrombospondin motifs 6 (LOC106086369), transcript variant X2, mRNA. ACCESSION XM_059366466 VERSION XM_059366466.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4899 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4899 /gene="LOC106086369" /note="A disintegrin and metalloproteinase with thrombospondin motifs 6; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:106086369" CDS 1078..4359 /gene="LOC106086369" /codon_start=1 /product="A disintegrin and metalloproteinase with thrombospondin motifs 6 isoform X1" /protein_id="XP_059222449.1" /db_xref="GeneID:106086369" /translation="MESHKRLKVIICLLVTTSTWLVYGAEQLLIGLHSDELISGELII PRKVTKSGEFISHNLIHHHGQHYKHNRKRRSLDDANLEPEVHYHVDIKNETLHLELEP HSYFMTPHLIVERHRRDVRTRKHLDMHTNCHYHGRIKDQPDSRVALSACNGLVGHIKT ENNEYYIEPSKPHASSAHNVNGHPHVVFQRSSVKEKQSAQQTNDKRKQQQNRRKQQQL QQQRNKLQQNGTKRQRRSLSNCGTKEPRRRIEARLVEWQPQGKVKIQGGRKIRRLHHQ QSQYKYETTTTDVKQQENQEQQQQQQHSHHFFQSHKQSHSSNNHKESQRILTSDTPPT IAFAPQAKPPSHWQHQQQPPYIHSNNDIGAHAHHHQRMKRSISSPRHVETLIVADSTM VAFHAKEVELYLLTIMNMVSALYKDPSIGNAIEIVVVKIILLDEEEAHIDLNLTQNAQ QNLDKFCSWQHKLNSGNEFDPHHHDVAVLITRKNICGNNCMTLGLANVGGMCKPKQSC SVNEDNGIMLSHTIAHELGHNFGMFHDTAKIGCHPRVGSIVHIMTPTFGADTLQVCWS NCSRKFITHFLDQGLGDCLDDEPTPLDEYAYPEEQPGKKYNAELQCRLQYNVTDSEVC SPMFEICSTLWCKVNGECITNMRPTAPGTMCGKRKWCQNGKCVRIESMEKVDGSWGNW SEWSECSRSCGGGVSIQQRECDSPRPANGGTFCIGERKKYKICNHQPCPKNEPSFRAL QCAKYNKKPYQGQFYKWLPYFDKQNPCKLYCNDEDDTIIANWGDVVLDGTPCTLGTNN MCIDGICRKVGCDWIVDSDEQEDRCGVCGGEGLECKTVKYVYNDTLKVSEGYVEIVVL PAKARHIIIKELGNSPHFLGVAKSNSSQFYLNGDSLISMPGEFAIAGAESFYDRIDDQ EIIKIPQPIQHSIAIYNIVRGDEPNEGIYYEFTLPALNASSSKHYLWKLSEWTQCSVT CGGGLQYREPICYENGRITSDTELCWAFAKNPRPQRLTKKCSSLPCPAHWLTGPWQFC PVTCRNPDDPLPVRRRSVMCLDPHDVILDDERCNPSTRPNDTDYCESNLPDCSIREKF KNRYS" polyA_site 4899 /gene="LOC106086369" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 taagaccgca ggagcgcgcg cttgggtcga aaaaactgtt tgagtgaata gacggagcac 61 agaggcttcc ttcttcagca aataaaaccg aaatacaaaa aacaaataaa aaaaagaact 121 tcgaggaaaa gtgttttttt ggtctgttga ctttatttgt gctttgcggt tatttgtgtt 181 tttttgctct ttggggctgt tgtttggcat ggaccacgtg aaaatctaaa gttcttttta 241 aagaatttct tcaagagaaa aaccaaaaat tcctatgaat tcgagaatat ttcatgggga 301 aaaataacat aaatcatatt ttgttgatca cattcttgaa attttaaaca aattttttgt 361 tattgtgtct ttgctggttc acggattgca gtggttgaca tacacataaa tatagtttgt 421 gagtgttttt ttttcttcta aaagtgagtg aaataatatg gaaaaaatta agaaaataaa 481 ttggcgaaaa atgtgtatgg aaaaaaattc agcaatctat aaacttgcct gtgtcgccgt 541 gaccacaaac aacgccaaac gttggcgctt gttcgccgcc acggtcgctc agtaattgtc 601 tccgccggcc gctattgttt taccatagcc caaaatgatt cactgaaaac gaaaaacaaa 661 aaaaaaaaaa aacaaaaaca aataaaaata acaaaatata aaataaaaac accataccca 721 cagaggcaga gataactttg ttttgatggc gttattgtct attcgattcg attgtaactt 781 taattgacga tgacttaaat ggcaattgtc gcttcctaac actatgctgc acatttttaa 841 agttataatc agaaattgca tacttcaaat tacaaaaaaa tgccctacgt gcaatgttaa 901 tacaaattat gtataaatcg aacaagatca ttgataatgg ataatcccta cgacgaaaat 961 tgtgaattat tctcaaaagt gagagacagt aattgactaa cagcggagaa aagattaaca 1021 tttcttgcca tattctgaag gaacggaaaa cagaatttta actcgaataa ataaatcatg 1081 gaatcacaca aacgtttaaa agtcatcatt tgcctgctgg tcacaacctc aacatggctt 1141 gtttatggag ctgaacaatt actcattggc ctgcactcgg acgaactgat atctggagaa 1201 cttataatac cgcgaaaagt cactaaaagt ggagagttta tatcgcacaa cctcatacat 1261 catcatgggc aacattacaa acataatcgc aaacgtcgta gtttagacga tgcaaatctc 1321 gaacctgagg tccactatca tgtggacatt aaaaatgaga cattacatct ggaactagaa 1381 cctcacagtt attttatgac accacatttg atagttgaaa gacatcgaag ggatgtaagg 1441 acacgcaaac atttggatat gcatacaaat tgtcattacc atgggcgtat taaggatcag 1501 ccggattcaa gggtggcctt gtcagcttgt aatggtctgg ttggtcacat aaaaactgaa 1561 aataatgaat attatattga gccatcaaaa cctcatgctt catcggccca caatgttaac 1621 ggacatccgc atgttgtatt tcaaagatca tctgttaagg aaaagcaatc tgcacagcag 1681 acaaacgaca aaaggaagca acagcaaaat agacgtaagc agcagcaatt gcaacagcaa 1741 cgtaataaat tgcagcaaaa tggaacaaag cgtcaaagga gatctttaag taattgtggc 1801 accaaggagc caagaaggcg catagaagca cgacttgtgg aatggcaacc acagggaaag 1861 gtaaaaattc aaggtggcag aaaaatacga aggctgcatc atcagcaatc gcaatataaa 1921 tatgagacta caacaacgga tgtaaaacag caagaaaacc aagaacagca acaacaacaa 1981 caacattctc atcacttttt ccagtcgcat aagcaatccc attcgagtaa caaccacaaa 2041 gaaagccaac gcatcttgac atcagacaca ccaccgacaa ttgcctttgc accacaagca 2101 aaaccaccat cacattggca acatcagcag caaccgcctt acattcacag caacaacgac 2161 atcggtgcgc atgcgcatca ccatcaacgc atgaaacgtt caattagcag cccacgccat 2221 gttgagactc taattgtagc cgattccaca atggttgcct ttcatgccaa agaggtggag 2281 ttatatcttt tgaccataat gaatatggtc tcagctctct acaaagatcc tagcattggc 2341 aatgctattg aaattgttgt ggttaagatc atacttctgg atgaggagga agctcatata 2401 gatttgaatc ttacacaaaa tgctcaacag aatttggata agttctgtag ttggcagcat 2461 aaattgaaca gcggcaatga atttgatcct catcatcatg atgtagccgt tttaataaca 2521 cgcaaaaata tatgcggcaa taactgtatg accctcggtt tggccaatgt gggcggcatg 2581 tgcaaaccca aacagtcttg cagtgttaat gaagataatg gcattatgct ctcacatacc 2641 atagctcatg aattgggaca caattttggc atgttccatg atacggcaaa aattggttgc 2701 catccacgtg tgggttccat agttcacatt atgacgccaa catttggtgc ggatactctg 2761 caagtctgtt ggtcaaattg tagtcgcaaa tttataacac acttcttgga tcaaggttta 2821 ggcgattgtt tggatgatga gcccaccccc ttggatgagt acgcctatcc cgaggaacaa 2881 ccaggaaaaa aatacaatgc cgaattgcaa tgtcgtctgc aatataatgt aacggacagt 2941 gaagtctgct cgcccatgtt tgagatttgc tcgactctgt ggtgcaaagt aaatggcgaa 3001 tgcattacaa atatgcgacc aactgctccg gggacaatgt gtggaaaacg taagtggtgt 3061 caaaatggaa aatgtgttcg cattgaatca atggaaaaag tcgatggatc ttggggcaat 3121 tggtctgaat ggagcgaatg ttctcgctcc tgcggcggtg gtgtctccat acaacagagg 3181 gaatgcgata gtcctcgccc agcaaatggt ggaacatttt gcattggcga gaggaaaaaa 3241 tataagattt gcaatcatca gccatgtccc aagaacgaac ccagtttcag ggccctacag 3301 tgtgcgaaat ataataaaaa gccatatcaa ggacaattct ataaatggct gccttacttt 3361 gacaaacaaa acccttgtaa attgtattgc aatgatgaag atgacaccat tatagccaat 3421 tggggtgatg tggtgctgga tggcacaccc tgcacattgg gcaccaataa catgtgcatt 3481 gatggcattt gtaggaaagt tggttgcgat tggattgttg attcggatga gcaagaagat 3541 cgttgcggtg tctgtggcgg tgaaggactt gagtgcaaaa cggtaaaata tgtctacaac 3601 gacactctta aggtcagcga aggatatgtg gaaatagtag ttttgcctgc taaagcacgc 3661 catataatta tcaaggagtt gggaaattca ccacattttc tgggtgtcgc aaagtcaaat 3721 agtagccaat tttatttgaa tggcgacagt ttgatatcaa tgccaggaga atttgccata 3781 gccggtgcag aaagtttcta tgatcgcata gatgatcaag agataattaa aataccacag 3841 cccatacaac attccatagc tatatataat atcgtgcgag gcgatgaacc caatgagggc 3901 atttactatg agtttacctt acccgcctta aatgccagct cttccaaaca ctatttgtgg 3961 aaattgagtg aatggactca atgttcggtg acatgtggtg gaggtttgca atatcgtgaa 4021 cccatttgct atgaaaatgg aagaattacc tcggataccg aactttgctg ggcttttgcc 4081 aaaaatccac gacctcagcg gctgacgaaa aaatgcagta gcctaccatg tccggctcat 4141 tggttgacag ggccatggca attttgccct gtcacctgcc gaaatcccga tgatccattg 4201 ccagtgcgca ggcgctctgt catgtgtctg gatccgcatg atgtcatttt ggatgatgag 4261 agatgtaatc cgtccaccag acccaacgat acggattatt gtgaatccaa tttacccgat 4321 tgtagtataa gagaaaaatt caaaaatcgc tatagttaag acagatggtt tagtttaagt 4381 aattgaggga tgtagaagtt cgttaaggtt actactctag agattttagg tttagttaat 4441 tttttgcaaa tataataacg caattaaata attttgtaaa ggtggagttg gataccacta 4501 aaaatgcaac tctgcaatca tatcccacaa aacctacgcg caaacgttaa gaattttcaa 4561 ctttgacgat tgcgtcattc tgtgttgcca tgcatgaagt tgtgtgtttt taggcgccaa 4621 agttcaaaat tctttgactt ttgcgcatcg cttttgtggg atttgtttgt agagttgcat 4681 ttttaatgcg cgcgcatagt atgtaactcc acgttgagtt gtgggacgtt ttggtgcgta 4741 ggctgtcaag ctcacctacg tatcaaaact actgagttca aattcgggtt tcaaacccgg 4801 gtttcagcaa tagtcgttcc atcaatgcca tctattgcca attaagaaca acttttcgtt 4861 ttccaaattc aataatttca aatacaaatt cgaactata