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LOCUS XM_059366458 5560 bp mRNA linear INV 02-SEP-2023 variant X5, mRNA. ACCESSION XM_059366458 VERSION XM_059366458.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5560 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5560 /gene="LOC106086025" /note="mucin-2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106086025" CDS 763..5070 /gene="LOC106086025" /codon_start=1 /product="mucin-2" /protein_id="XP_059222441.1" /db_xref="GeneID:106086025" /translation="MSKSGFSTLNRWLGRKNKEKSMPNGSLSKSSTNLSISSTNINET SQLEYNRITPLPAATTNAPFEQTFRITVLLPKDQLYVARLGARVPLSKLLELVCDNKL LDSEKYEFRNPVDSSQVYSCDLTIGAVGLSEIRLCHKSESYDNFSTDEIMKLQRTSLI RESLTSSEFSSRNSKHTTKTTSPYSSSNSLNSMDSSGIHSTKAMRLSAGPQAKMAAPP RKKRAAPRPPSQAVIPEKSPLITENGNGGARESPAPSSPVNGNMEAKDFSVSTPDLSS HSDINGNDCNGHMQDIKETSQAEANGYSDDTVLYAQVQKKNALNLNSTSVENLTASSP TPSSLGGESSKFPEPSPRKRVVPAPKKKMVAPPAPQPRGSTYSDDSVSIGSANLSSEP STPVALTTPVQEFKAPSPQPAQRQQSREDMAAAPDVPKPQPRITTTTLLNATDLKADL KNLESHTAEKREESNNEEKQKVVSNVSKVMLNRTPTPEPRSLSCEPPDIDVCYETQLE NLKSPIEDDNVSKQADSGIGEPVPSPIPDSLPSEVSIHDVKSNFESSSDDDDMVKVYN FKLGKTLVKPLNETKTLEELTIMNDVQEETDSDLNTPNLTQVNSSNAPSETSSWNFAI PISPPPNFADNKFSEAFVEAEKQEQENPITPKIMERPILNFEVLKQEDQTKAKSKSVS TPSTVTPSTPLDSIVGELSAIIQEKGLDTLIKKSEESQEIEAAKPNTLTNFTINSVSR ATLTKPKEVQNEVVQAKQEVETSPPSPLDSPTNAPDEEKLYRKRNSVTGLKQRRSITR SDSFHTTAIATENTSSSGTLTKRTSSQISLDQMANGNLNRRRSSSELSIGESPSLQSL EVMKTILNARKNSLPHSGEEEEEEVNTRRPSEEIKFASLELKNKMALEKSPNPRQGEE EVEAKKLESKENIKKLWQNRANTEIEEYNKNVAKSFNEKESPKQQTRNETPTTEDNPK AFKKEEETDEITQLRRKEIPVEEKPKELPRVYRYSGPPSINFSTWSERPKVQVAIKNE GDYIFGGKSIENKAIENKTVPRSYRMSTPLNFNEPTTQESKVLPSVAPKPATIKRMGI PEKEFKVPVMVKPIKDVIVESTHEQKTKVTANGEEQNPKTPATPSETAKPMLQVAAKP QSPVLHKPPTPVKVISNGGQRLSLHRPTIESVLKPQTQTIVNTHTHNSTLPRTNKRFS TSLSTTSNTTSITNGAQTSATPITPGPQLLRSTSTKREERETKSMFIPNEAPSAPAPF GQNTLRRTGFKEKIMAKDEEEQQKAISTSSISLAKTPTTNATTPSKALTNGELKFTTA AKFEKKPTNTITATTTTTSAKLHLNLQKSTSITVTNSSSSSIITPPTPSLKPKPHTPK TAPILATASQPPPPPPPAMAYKLKPVTAVRTPTASEDPRDQLLAAIRNFKKDELKRA" ORIGIN 1 tttcactttc agttgtaacg tgacgtttgg ccaagtttca cacaaaacgc acgccgtgga 61 caacttggtt ttgtttctct agctaaatta gaaaagcgcg caacttccgt ggacaatatc 121 ttaaaatttg tggtctccga gctgcctaga attagcgaaa ccacatttat gtagtttgtt 181 gttggtttgt aaatgttgtg ggtttttgat aagaaaagaa tttgaattta attaaaacaa 241 acaaacgtga gcccagtcaa agttctgtta atgaaatcat atgctataga gttttttttt 301 tgtctaccat taattaaaag tgtgcagtca aataactaaa gaaacgcaac gggttttgta 361 aaattgttaa ggcatatatg gaaaagtgcg atagcatatt atttgttaag tgatcgatag 421 aaaatttcta aaaattgctc ctcaactgca agtgctgaaa gtattttaag ataccaaaga 481 aaaactgcaa aatttattta gttgagttga acatttgaaa cgaaaggcta cagtggtttg 541 ttagtattac gcaaatcaaa gcaacaagga gctgttactt caataaaaaa aacaaagata 601 aagccatgag ttcaaggaat taagcacaaa cacagcaacc ctgaagttac aagaaaccta 661 ggaattaagc ctttaaacta caacgaagtg aaaccaaatc cataacatat ttttttcttt 721 ttgggagaag acctttgaaa accactaaaa acacacaaca aaatgagcaa atcgggattc 781 tctacactca accgatggtt ggggcgtaaa aataaagaaa aatccatgcc taatggcagt 841 ttatccaaat ctagcacaaa tctctccata tcttccacaa atatcaatga aactagtcaa 901 ctggagtata atcgcatcac accattgcca gctgccacca caaatgcccc atttgagcag 961 acatttcgca taactgttct gctgcccaaa gatcagctgt acgtggcacg tttgggtgcc 1021 cgtgtgccgc tgagtaaact tttggagttg gtgtgcgata ataaattatt ggattctgag 1081 aaatatgaat ttagaaatcc agttgattct agtcaagtct atagctgcga tttaacaatt 1141 ggcgctgttg gactctccga aatacgttta tgtcacaaat ccgagtcata cgataacttt 1201 agtaccgatg aaatcatgaa actgcaacgc acttcactta tacgcgaatc attgacatca 1261 tccgagttca gcagtcgcaa ttccaagcat acaacgaaaa ccactagtcc ttatagttct 1321 agcaatagtc tgaattctat ggattcctcg ggtatacaca gcaccaaggc aatgcgtttg 1381 tcggcaggac cccaagcaaa gatggcagct ccgccacgca aaaagcgagc agctcccagg 1441 cctccaagtc aggctgtcat acccgaaaag agtcccctca tcacagagaa tggtaatggt 1501 ggagcgagag aaagtccagc tcccagcagc ccggtaaacg gtaacatgga ggccaaagat 1561 ttttcggtat ccacccccga tttatcatcg cacagtgata ttaatggcaa tgattgtaat 1621 ggtcatatgc aggatattaa ggagacgtcg caagccgagg ccaatggtta ctccgacgat 1681 acggtacttt atgcccaagt acaaaagaaa aatgccttga atttgaacag cacaagtgtg 1741 gaaaatttga ctgcctcatc accgacgcca tcatcgctgg ggggagagag cagcaaattt 1801 ccggaacctt caccgcgcaa acgggtagta cctgcaccga aaaagaaaat ggtggcccct 1861 ccagccccac aacccagggg atccacttat agtgatgata gcgtttccat aggttcggcc 1921 aatttatcct ctgagccttc cactccggtg gctttgacta ccccagtgca agaatttaag 1981 gcgccttcgc ctcaacccgc ccaaaggcaa cagtcaagag aggatatggc tgcagcacca 2041 gatgtgccaa aaccccagcc acgcataacc accactacgc tgctgaatgc cacagattta 2101 aaggcagacc tgaagaattt ggaaagtcac accgcagaga agagggagga gagtaacaat 2161 gaggagaagc aaaaagtggt tagcaatgtc tccaaagtca tgttgaatcg cactcccact 2221 ccagagcctc gttcgctgtc ctgcgaacct cccgacatcg atgtctgcta tgaaacccaa 2281 ttggaaaatc taaagtcccc catagaagat gacaatgttt ccaagcaagc agattcgggc 2341 ataggcgaac ctgtgccctc gcccataccc gatagtctgc cctcagaggt atccatacat 2401 gatgtcaaat cgaatttcga gtcctcctcg gatgatgatg acatggtcaa ggtctacaat 2461 ttcaagttgg gcaagactct ggtgaagccc ctcaacgaaa ccaaaaccct ggaagagctg 2521 accataatga acgatgtgca ggaggagact gacagtgatt taaatacacc caacttgaca 2581 caggtcaatt catcgaatgc cccctcagag acctcttcat ggaattttgc catacccata 2641 tcacctcctc ccaattttgc ggataataaa ttctccgaag cctttgtgga ggccgaaaaa 2701 caagagcaag aaaatcccat tacaccaaag attatggaaa gacccatctt gaattttgaa 2761 gtgctgaagc aggaggatca aacaaaagcc aaatcgaaaa gtgtcagcac cccatcaacg 2821 gttacaccca gtacaccctt ggacagtata gtgggggaat tgtcagccat tatacaggag 2881 aagggtttgg acaccttgat caagaaatcc gaggagagcc aagaaattga ggcagccaaa 2941 cccaatacac tgacaaattt caccattaac tctgtcagca gggccactct taccaagccc 3001 aaagaagttc agaatgaagt tgtccaagcc aagcaggaag tggagacttc cccaccctca 3061 cccttggatt cacccactaa tgctcccgac gaagagaaat tgtatcgcaa acgcaacagt 3121 gtcacaggcc ttaagcaaag gcgttccatt acccgttccg attccttcca taccacagcc 3181 atagctacag agaataccag ttcctctgga actctgacca aaagaacctc ttcgcaaata 3241 tctttggatc aaatggccaa tggcaatctt aaccgtcgac gctcctccag tgaattgagc 3301 attggagaat caccctctct gcagagtttg gaggtcatga aaaccatact caatgcccgc 3361 aaaaatagtc taccccacag tggtgaagag gaggaggagg aggtgaatac gagaaggcct 3421 tcggaggaga tcaaatttgc cagcctggag ctgaaaaata aaatggcctt ggagaaaagt 3481 cccaatccca ggcaagggga agaggaggtg gaggcaaaaa aattggaatc taaagaaaac 3541 atcaaaaaac tttggcaaaa cagagccaat acagagatag aggaatacaa caaaaatgtg 3601 gctaaaagct ttaatgagaa agaaagcccc aaacagcaga caagaaatga aaccccaaca 3661 acagaagata atccaaaagc ttttaagaag gaggaggaaa ccgatgaaat cactcagcta 3721 cgaaggaagg agattcctgt cgaagaaaaa ccaaaagaat tgcccagggt atatcgctat 3781 tctggtccac ccagcataaa tttctccacc tggagtgaaa gacccaaggt gcaggtggcc 3841 atcaaaaatg agggcgacta tatctttgga ggcaagtcca ttgaaaacaa ggccattgaa 3901 aacaaaacag tgcctcgtag ctatcgcatg tccaccccac tcaatttcaa tgaaccaacc 3961 acacaagaat ccaaagtttt gccttctgtg gctcccaagc cggcgacaat aaaacgcatg 4021 ggtatacccg aaaaggaatt taaggtacca gttatggtga aacccattaa ggatgtcatc 4081 gttgaaagta ctcatgaaca gaaaaccaaa gtaaccgcaa atggtgaaga gcagaatcca 4141 aaaactcctg caaccccaag tgaaactgcg aaacccatgc tccaagtagc tgcaaaacct 4201 cagagccctg ttctacacaa gccacccact cctgttaaag tcatatcaaa tggaggtcaa 4261 agactatcgc tgcatagacc caccattgaa tcggtactca aacctcaaac tcaaaccata 4321 gtcaatacac atacccataa ctctacacta ccgcgtacca ataaacgctt ctccacttcc 4381 ctatccacca cctccaacac cacaagcatc acaaatggcg cacaaacttc agcaactcca 4441 ataacgccag gaccacagct tttacgctct acctctacaa agcgcgagga aagggaaacc 4501 aaatccatgt tcataccaaa tgaggcccct tctgcgccag caccatttgg ccaaaatact 4561 ttgagacgca ctggcttcaa agagaaaatc atggccaaag atgaggagga gcaacaaaaa 4621 gccataagca ctagctctat atccttagca aagacaccaa ccacaaatgc caccacaccc 4681 agcaaagctt taacaaatgg tgaattgaaa ttcaccacgg cggcgaagtt tgaaaagaag 4741 cctacaaaca caataacagc aacaacaaca acaacgagtg ccaaattaca tttaaatttg 4801 caaaaatcca catcgattac agtcaccaac agcagcagca gcagcatcat cacacctccc 4861 acaccttcgc ttaagccaaa accccataca ccaaaaactg ccccgatact ggcgacagca 4921 tcccaaccgc ccccacctcc accgcctgca atggcctaca aattaaaacc tgtgactgca 4981 gtgcggacac ccacagcctc agaagatccc agagatcagt tactggcagc tattcggaac 5041 ttcaaaaagg atgaactaaa gagagcgtaa aatattaaca aaaacaactt tcttaaaatt 5101 caacactcta gtgaatattg gttctaaacc aagctttctt ctttacaata atttatgatt 5161 taaaaatctg ttttagcaac ttaagtcaca aactaattta atttaatata tatttagcta 5221 atagaaaata cataggcgat tcttatttct ttgtaaagtg gaaaaaccca agcaaaattt 5281 tcaaaaaaaa aaaaacaacc atatgatatg tttgatatat aaataatata ttgtttatgt 5341 agtttttaag tttattaaat tctgttaatg tcaactttaa ccctctacaa taggtatctg 5401 gtctttatta attctatcta taatatattt tttctattta aagaaaacga ttttatgtga 5461 gtgtgctctc caatgaaagt ttttaacttt cattctggtt gagttggcca cattgttaat 5521 aagtgtaaaa tattattata attattatta tttttattgc