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LOCUS XM_059366457 5467 bp mRNA linear INV 02-SEP-2023 variant X4, mRNA. ACCESSION XM_059366457 VERSION XM_059366457.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5467 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5467 /gene="LOC106086025" /note="mucin-2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106086025" CDS 670..4977 /gene="LOC106086025" /codon_start=1 /product="mucin-2" /protein_id="XP_059222440.1" /db_xref="GeneID:106086025" /translation="MSKSGFSTLNRWLGRKNKEKSMPNGSLSKSSTNLSISSTNINET SQLEYNRITPLPAATTNAPFEQTFRITVLLPKDQLYVARLGARVPLSKLLELVCDNKL LDSEKYEFRNPVDSSQVYSCDLTIGAVGLSEIRLCHKSESYDNFSTDEIMKLQRTSLI RESLTSSEFSSRNSKHTTKTTSPYSSSNSLNSMDSSGIHSTKAMRLSAGPQAKMAAPP RKKRAAPRPPSQAVIPEKSPLITENGNGGARESPAPSSPVNGNMEAKDFSVSTPDLSS HSDINGNDCNGHMQDIKETSQAEANGYSDDTVLYAQVQKKNALNLNSTSVENLTASSP TPSSLGGESSKFPEPSPRKRVVPAPKKKMVAPPAPQPRGSTYSDDSVSIGSANLSSEP STPVALTTPVQEFKAPSPQPAQRQQSREDMAAAPDVPKPQPRITTTTLLNATDLKADL KNLESHTAEKREESNNEEKQKVVSNVSKVMLNRTPTPEPRSLSCEPPDIDVCYETQLE NLKSPIEDDNVSKQADSGIGEPVPSPIPDSLPSEVSIHDVKSNFESSSDDDDMVKVYN FKLGKTLVKPLNETKTLEELTIMNDVQEETDSDLNTPNLTQVNSSNAPSETSSWNFAI PISPPPNFADNKFSEAFVEAEKQEQENPITPKIMERPILNFEVLKQEDQTKAKSKSVS TPSTVTPSTPLDSIVGELSAIIQEKGLDTLIKKSEESQEIEAAKPNTLTNFTINSVSR ATLTKPKEVQNEVVQAKQEVETSPPSPLDSPTNAPDEEKLYRKRNSVTGLKQRRSITR SDSFHTTAIATENTSSSGTLTKRTSSQISLDQMANGNLNRRRSSSELSIGESPSLQSL EVMKTILNARKNSLPHSGEEEEEEVNTRRPSEEIKFASLELKNKMALEKSPNPRQGEE EVEAKKLESKENIKKLWQNRANTEIEEYNKNVAKSFNEKESPKQQTRNETPTTEDNPK AFKKEEETDEITQLRRKEIPVEEKPKELPRVYRYSGPPSINFSTWSERPKVQVAIKNE GDYIFGGKSIENKAIENKTVPRSYRMSTPLNFNEPTTQESKVLPSVAPKPATIKRMGI PEKEFKVPVMVKPIKDVIVESTHEQKTKVTANGEEQNPKTPATPSETAKPMLQVAAKP QSPVLHKPPTPVKVISNGGQRLSLHRPTIESVLKPQTQTIVNTHTHNSTLPRTNKRFS TSLSTTSNTTSITNGAQTSATPITPGPQLLRSTSTKREERETKSMFIPNEAPSAPAPF GQNTLRRTGFKEKIMAKDEEEQQKAISTSSISLAKTPTTNATTPSKALTNGELKFTTA AKFEKKPTNTITATTTTTSAKLHLNLQKSTSITVTNSSSSSIITPPTPSLKPKPHTPK TAPILATASQPPPPPPPAMAYKLKPVTAVRTPTASEDPRDQLLAAIRNFKKDELKRA" ORIGIN 1 taaatacaaa aataaaataa ataattaaac aaaataaaaa ataaagctaa agtttttgga 61 taacttaaat tttgcatcat cagaaagtaa tcaaaatcaa aacaaacaaa atcaaggaaa 121 ttattttact gcacatagca agagaagata aaaaggtgca tcgaattttt gaacaaatta 181 tggtataaac gtcagtcggt gtctaagctt tgtcttgcgt atggtcaaat aacctggttg 241 attattcttc aaggcggtgt taagaaggag aaaaaactca taactggttg taaatgtgat 301 tgtcaccgca cgtatcgatg taggttgcca aaattttgaa acggagcgag aagtcatttt 361 ccttcattgg cgaaactttt ttaaaagaaa actgcaaaat ttatttagtt gagttgaaca 421 tttgaaacga aaggctacag tggtttgtta gtattacgca aatcaaagca acaaggagct 481 gttacttcaa taaaaaaaac aaagataaag ccatgagttc aaggaattaa gcacaaacac 541 agcaaccctg aagttacaag aaacctagga attaagcctt taaactacaa cgaagtgaaa 601 ccaaatccat aacatatttt tttctttttg ggagaagacc tttgaaaacc actaaaaaca 661 cacaacaaaa tgagcaaatc gggattctct acactcaacc gatggttggg gcgtaaaaat 721 aaagaaaaat ccatgcctaa tggcagttta tccaaatcta gcacaaatct ctccatatct 781 tccacaaata tcaatgaaac tagtcaactg gagtataatc gcatcacacc attgccagct 841 gccaccacaa atgccccatt tgagcagaca tttcgcataa ctgttctgct gcccaaagat 901 cagctgtacg tggcacgttt gggtgcccgt gtgccgctga gtaaactttt ggagttggtg 961 tgcgataata aattattgga ttctgagaaa tatgaattta gaaatccagt tgattctagt 1021 caagtctata gctgcgattt aacaattggc gctgttggac tctccgaaat acgtttatgt 1081 cacaaatccg agtcatacga taactttagt accgatgaaa tcatgaaact gcaacgcact 1141 tcacttatac gcgaatcatt gacatcatcc gagttcagca gtcgcaattc caagcataca 1201 acgaaaacca ctagtcctta tagttctagc aatagtctga attctatgga ttcctcgggt 1261 atacacagca ccaaggcaat gcgtttgtcg gcaggacccc aagcaaagat ggcagctccg 1321 ccacgcaaaa agcgagcagc tcccaggcct ccaagtcagg ctgtcatacc cgaaaagagt 1381 cccctcatca cagagaatgg taatggtgga gcgagagaaa gtccagctcc cagcagcccg 1441 gtaaacggta acatggaggc caaagatttt tcggtatcca cccccgattt atcatcgcac 1501 agtgatatta atggcaatga ttgtaatggt catatgcagg atattaagga gacgtcgcaa 1561 gccgaggcca atggttactc cgacgatacg gtactttatg cccaagtaca aaagaaaaat 1621 gccttgaatt tgaacagcac aagtgtggaa aatttgactg cctcatcacc gacgccatca 1681 tcgctggggg gagagagcag caaatttccg gaaccttcac cgcgcaaacg ggtagtacct 1741 gcaccgaaaa agaaaatggt ggcccctcca gccccacaac ccaggggatc cacttatagt 1801 gatgatagcg tttccatagg ttcggccaat ttatcctctg agccttccac tccggtggct 1861 ttgactaccc cagtgcaaga atttaaggcg ccttcgcctc aacccgccca aaggcaacag 1921 tcaagagagg atatggctgc agcaccagat gtgccaaaac cccagccacg cataaccacc 1981 actacgctgc tgaatgccac agatttaaag gcagacctga agaatttgga aagtcacacc 2041 gcagagaaga gggaggagag taacaatgag gagaagcaaa aagtggttag caatgtctcc 2101 aaagtcatgt tgaatcgcac tcccactcca gagcctcgtt cgctgtcctg cgaacctccc 2161 gacatcgatg tctgctatga aacccaattg gaaaatctaa agtcccccat agaagatgac 2221 aatgtttcca agcaagcaga ttcgggcata ggcgaacctg tgccctcgcc catacccgat 2281 agtctgccct cagaggtatc catacatgat gtcaaatcga atttcgagtc ctcctcggat 2341 gatgatgaca tggtcaaggt ctacaatttc aagttgggca agactctggt gaagcccctc 2401 aacgaaacca aaaccctgga agagctgacc ataatgaacg atgtgcagga ggagactgac 2461 agtgatttaa atacacccaa cttgacacag gtcaattcat cgaatgcccc ctcagagacc 2521 tcttcatgga attttgccat acccatatca cctcctccca attttgcgga taataaattc 2581 tccgaagcct ttgtggaggc cgaaaaacaa gagcaagaaa atcccattac accaaagatt 2641 atggaaagac ccatcttgaa ttttgaagtg ctgaagcagg aggatcaaac aaaagccaaa 2701 tcgaaaagtg tcagcacccc atcaacggtt acacccagta cacccttgga cagtatagtg 2761 ggggaattgt cagccattat acaggagaag ggtttggaca ccttgatcaa gaaatccgag 2821 gagagccaag aaattgaggc agccaaaccc aatacactga caaatttcac cattaactct 2881 gtcagcaggg ccactcttac caagcccaaa gaagttcaga atgaagttgt ccaagccaag 2941 caggaagtgg agacttcccc accctcaccc ttggattcac ccactaatgc tcccgacgaa 3001 gagaaattgt atcgcaaacg caacagtgtc acaggcctta agcaaaggcg ttccattacc 3061 cgttccgatt ccttccatac cacagccata gctacagaga ataccagttc ctctggaact 3121 ctgaccaaaa gaacctcttc gcaaatatct ttggatcaaa tggccaatgg caatcttaac 3181 cgtcgacgct cctccagtga attgagcatt ggagaatcac cctctctgca gagtttggag 3241 gtcatgaaaa ccatactcaa tgcccgcaaa aatagtctac cccacagtgg tgaagaggag 3301 gaggaggagg tgaatacgag aaggccttcg gaggagatca aatttgccag cctggagctg 3361 aaaaataaaa tggccttgga gaaaagtccc aatcccaggc aaggggaaga ggaggtggag 3421 gcaaaaaaat tggaatctaa agaaaacatc aaaaaacttt ggcaaaacag agccaataca 3481 gagatagagg aatacaacaa aaatgtggct aaaagcttta atgagaaaga aagccccaaa 3541 cagcagacaa gaaatgaaac cccaacaaca gaagataatc caaaagcttt taagaaggag 3601 gaggaaaccg atgaaatcac tcagctacga aggaaggaga ttcctgtcga agaaaaacca 3661 aaagaattgc ccagggtata tcgctattct ggtccaccca gcataaattt ctccacctgg 3721 agtgaaagac ccaaggtgca ggtggccatc aaaaatgagg gcgactatat ctttggaggc 3781 aagtccattg aaaacaaggc cattgaaaac aaaacagtgc ctcgtagcta tcgcatgtcc 3841 accccactca atttcaatga accaaccaca caagaatcca aagttttgcc ttctgtggct 3901 cccaagccgg cgacaataaa acgcatgggt atacccgaaa aggaatttaa ggtaccagtt 3961 atggtgaaac ccattaagga tgtcatcgtt gaaagtactc atgaacagaa aaccaaagta 4021 accgcaaatg gtgaagagca gaatccaaaa actcctgcaa ccccaagtga aactgcgaaa 4081 cccatgctcc aagtagctgc aaaacctcag agccctgttc tacacaagcc acccactcct 4141 gttaaagtca tatcaaatgg aggtcaaaga ctatcgctgc atagacccac cattgaatcg 4201 gtactcaaac ctcaaactca aaccatagtc aatacacata cccataactc tacactaccg 4261 cgtaccaata aacgcttctc cacttcccta tccaccacct ccaacaccac aagcatcaca 4321 aatggcgcac aaacttcagc aactccaata acgccaggac cacagctttt acgctctacc 4381 tctacaaagc gcgaggaaag ggaaaccaaa tccatgttca taccaaatga ggccccttct 4441 gcgccagcac catttggcca aaatactttg agacgcactg gcttcaaaga gaaaatcatg 4501 gccaaagatg aggaggagca acaaaaagcc ataagcacta gctctatatc cttagcaaag 4561 acaccaacca caaatgccac cacacccagc aaagctttaa caaatggtga attgaaattc 4621 accacggcgg cgaagtttga aaagaagcct acaaacacaa taacagcaac aacaacaaca 4681 acgagtgcca aattacattt aaatttgcaa aaatccacat cgattacagt caccaacagc 4741 agcagcagca gcatcatcac acctcccaca ccttcgctta agccaaaacc ccatacacca 4801 aaaactgccc cgatactggc gacagcatcc caaccgcccc cacctccacc gcctgcaatg 4861 gcctacaaat taaaacctgt gactgcagtg cggacaccca cagcctcaga agatcccaga 4921 gatcagttac tggcagctat tcggaacttc aaaaaggatg aactaaagag agcgtaaaat 4981 attaacaaaa acaactttct taaaattcaa cactctagtg aatattggtt ctaaaccaag 5041 ctttcttctt tacaataatt tatgatttaa aaatctgttt tagcaactta agtcacaaac 5101 taatttaatt taatatatat ttagctaata gaaaatacat aggcgattct tatttctttg 5161 taaagtggaa aaacccaagc aaaattttca aaaaaaaaaa aacaaccata tgatatgttt 5221 gatatataaa taatatattg tttatgtagt ttttaagttt attaaattct gttaatgtca 5281 actttaaccc tctacaatag gtatctggtc tttattaatt ctatctataa tatatttttt 5341 ctatttaaag aaaacgattt tatgtgagtg tgctctccaa tgaaagtttt taactttcat 5401 tctggttgag ttggccacat tgttaataag tgtaaaatat tattataatt attattattt 5461 ttattgc