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LOCUS XM_059366454 5514 bp mRNA linear INV 02-SEP-2023 variant X1, mRNA. ACCESSION XM_059366454 VERSION XM_059366454.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5514 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5514 /gene="LOC106086025" /note="mucin-2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106086025" CDS 717..5024 /gene="LOC106086025" /codon_start=1 /product="mucin-2" /protein_id="XP_059222437.1" /db_xref="GeneID:106086025" /translation="MSKSGFSTLNRWLGRKNKEKSMPNGSLSKSSTNLSISSTNINET SQLEYNRITPLPAATTNAPFEQTFRITVLLPKDQLYVARLGARVPLSKLLELVCDNKL LDSEKYEFRNPVDSSQVYSCDLTIGAVGLSEIRLCHKSESYDNFSTDEIMKLQRTSLI RESLTSSEFSSRNSKHTTKTTSPYSSSNSLNSMDSSGIHSTKAMRLSAGPQAKMAAPP RKKRAAPRPPSQAVIPEKSPLITENGNGGARESPAPSSPVNGNMEAKDFSVSTPDLSS HSDINGNDCNGHMQDIKETSQAEANGYSDDTVLYAQVQKKNALNLNSTSVENLTASSP TPSSLGGESSKFPEPSPRKRVVPAPKKKMVAPPAPQPRGSTYSDDSVSIGSANLSSEP STPVALTTPVQEFKAPSPQPAQRQQSREDMAAAPDVPKPQPRITTTTLLNATDLKADL KNLESHTAEKREESNNEEKQKVVSNVSKVMLNRTPTPEPRSLSCEPPDIDVCYETQLE NLKSPIEDDNVSKQADSGIGEPVPSPIPDSLPSEVSIHDVKSNFESSSDDDDMVKVYN FKLGKTLVKPLNETKTLEELTIMNDVQEETDSDLNTPNLTQVNSSNAPSETSSWNFAI PISPPPNFADNKFSEAFVEAEKQEQENPITPKIMERPILNFEVLKQEDQTKAKSKSVS TPSTVTPSTPLDSIVGELSAIIQEKGLDTLIKKSEESQEIEAAKPNTLTNFTINSVSR ATLTKPKEVQNEVVQAKQEVETSPPSPLDSPTNAPDEEKLYRKRNSVTGLKQRRSITR SDSFHTTAIATENTSSSGTLTKRTSSQISLDQMANGNLNRRRSSSELSIGESPSLQSL EVMKTILNARKNSLPHSGEEEEEEVNTRRPSEEIKFASLELKNKMALEKSPNPRQGEE EVEAKKLESKENIKKLWQNRANTEIEEYNKNVAKSFNEKESPKQQTRNETPTTEDNPK AFKKEEETDEITQLRRKEIPVEEKPKELPRVYRYSGPPSINFSTWSERPKVQVAIKNE GDYIFGGKSIENKAIENKTVPRSYRMSTPLNFNEPTTQESKVLPSVAPKPATIKRMGI PEKEFKVPVMVKPIKDVIVESTHEQKTKVTANGEEQNPKTPATPSETAKPMLQVAAKP QSPVLHKPPTPVKVISNGGQRLSLHRPTIESVLKPQTQTIVNTHTHNSTLPRTNKRFS TSLSTTSNTTSITNGAQTSATPITPGPQLLRSTSTKREERETKSMFIPNEAPSAPAPF GQNTLRRTGFKEKIMAKDEEEQQKAISTSSISLAKTPTTNATTPSKALTNGELKFTTA AKFEKKPTNTITATTTTTSAKLHLNLQKSTSITVTNSSSSSIITPPTPSLKPKPHTPK TAPILATASQPPPPPPPAMAYKLKPVTAVRTPTASEDPRDQLLAAIRNFKKDELKRA" ORIGIN 1 taaatacaaa aataaaataa ataattaaac aaaataaaaa ataaagctaa agtttttgga 61 taacttaaat tttgcatcat cagaaagtaa tcaaaatcaa aacaaacaaa atcaaggaaa 121 ttattttact gcacatagca agagaagata aaaaggtgca tcgaattttt gaacaaatta 181 tggtataaac gtcagtcggt gtctaagctt tgtcttgcgt atggtcaaat aacctggttg 241 attattcttc aaggcggtgt taagaaggag aaaaaactca taactggttg taaatgtgat 301 tgtcaccgca cgtatcgatg taggttgcca aaattttgaa acggagcgag aacttttgtt 361 ggcggcaaaa atatgtaaat aaacttccaa acaaaatcgg tcattttcct tcattggcga 421 aactttttta aaagaaaact gcaaaattta tttagttgag ttgaacattt gaaacgaaag 481 gctacagtgg tttgttagta ttacgcaaat caaagcaaca aggagctgtt acttcaataa 541 aaaaaacaaa gataaagcca tgagttcaag gaattaagca caaacacagc aaccctgaag 601 ttacaagaaa cctaggaatt aagcctttaa actacaacga agtgaaacca aatccataac 661 atattttttt ctttttggga gaagaccttt gaaaaccact aaaaacacac aacaaaatga 721 gcaaatcggg attctctaca ctcaaccgat ggttggggcg taaaaataaa gaaaaatcca 781 tgcctaatgg cagtttatcc aaatctagca caaatctctc catatcttcc acaaatatca 841 atgaaactag tcaactggag tataatcgca tcacaccatt gccagctgcc accacaaatg 901 ccccatttga gcagacattt cgcataactg ttctgctgcc caaagatcag ctgtacgtgg 961 cacgtttggg tgcccgtgtg ccgctgagta aacttttgga gttggtgtgc gataataaat 1021 tattggattc tgagaaatat gaatttagaa atccagttga ttctagtcaa gtctatagct 1081 gcgatttaac aattggcgct gttggactct ccgaaatacg tttatgtcac aaatccgagt 1141 catacgataa ctttagtacc gatgaaatca tgaaactgca acgcacttca cttatacgcg 1201 aatcattgac atcatccgag ttcagcagtc gcaattccaa gcatacaacg aaaaccacta 1261 gtccttatag ttctagcaat agtctgaatt ctatggattc ctcgggtata cacagcacca 1321 aggcaatgcg tttgtcggca ggaccccaag caaagatggc agctccgcca cgcaaaaagc 1381 gagcagctcc caggcctcca agtcaggctg tcatacccga aaagagtccc ctcatcacag 1441 agaatggtaa tggtggagcg agagaaagtc cagctcccag cagcccggta aacggtaaca 1501 tggaggccaa agatttttcg gtatccaccc ccgatttatc atcgcacagt gatattaatg 1561 gcaatgattg taatggtcat atgcaggata ttaaggagac gtcgcaagcc gaggccaatg 1621 gttactccga cgatacggta ctttatgccc aagtacaaaa gaaaaatgcc ttgaatttga 1681 acagcacaag tgtggaaaat ttgactgcct catcaccgac gccatcatcg ctggggggag 1741 agagcagcaa atttccggaa ccttcaccgc gcaaacgggt agtacctgca ccgaaaaaga 1801 aaatggtggc ccctccagcc ccacaaccca ggggatccac ttatagtgat gatagcgttt 1861 ccataggttc ggccaattta tcctctgagc cttccactcc ggtggctttg actaccccag 1921 tgcaagaatt taaggcgcct tcgcctcaac ccgcccaaag gcaacagtca agagaggata 1981 tggctgcagc accagatgtg ccaaaacccc agccacgcat aaccaccact acgctgctga 2041 atgccacaga tttaaaggca gacctgaaga atttggaaag tcacaccgca gagaagaggg 2101 aggagagtaa caatgaggag aagcaaaaag tggttagcaa tgtctccaaa gtcatgttga 2161 atcgcactcc cactccagag cctcgttcgc tgtcctgcga acctcccgac atcgatgtct 2221 gctatgaaac ccaattggaa aatctaaagt cccccataga agatgacaat gtttccaagc 2281 aagcagattc gggcataggc gaacctgtgc cctcgcccat acccgatagt ctgccctcag 2341 aggtatccat acatgatgtc aaatcgaatt tcgagtcctc ctcggatgat gatgacatgg 2401 tcaaggtcta caatttcaag ttgggcaaga ctctggtgaa gcccctcaac gaaaccaaaa 2461 ccctggaaga gctgaccata atgaacgatg tgcaggagga gactgacagt gatttaaata 2521 cacccaactt gacacaggtc aattcatcga atgccccctc agagacctct tcatggaatt 2581 ttgccatacc catatcacct cctcccaatt ttgcggataa taaattctcc gaagcctttg 2641 tggaggccga aaaacaagag caagaaaatc ccattacacc aaagattatg gaaagaccca 2701 tcttgaattt tgaagtgctg aagcaggagg atcaaacaaa agccaaatcg aaaagtgtca 2761 gcaccccatc aacggttaca cccagtacac ccttggacag tatagtgggg gaattgtcag 2821 ccattataca ggagaagggt ttggacacct tgatcaagaa atccgaggag agccaagaaa 2881 ttgaggcagc caaacccaat acactgacaa atttcaccat taactctgtc agcagggcca 2941 ctcttaccaa gcccaaagaa gttcagaatg aagttgtcca agccaagcag gaagtggaga 3001 cttccccacc ctcacccttg gattcaccca ctaatgctcc cgacgaagag aaattgtatc 3061 gcaaacgcaa cagtgtcaca ggccttaagc aaaggcgttc cattacccgt tccgattcct 3121 tccataccac agccatagct acagagaata ccagttcctc tggaactctg accaaaagaa 3181 cctcttcgca aatatctttg gatcaaatgg ccaatggcaa tcttaaccgt cgacgctcct 3241 ccagtgaatt gagcattgga gaatcaccct ctctgcagag tttggaggtc atgaaaacca 3301 tactcaatgc ccgcaaaaat agtctacccc acagtggtga agaggaggag gaggaggtga 3361 atacgagaag gccttcggag gagatcaaat ttgccagcct ggagctgaaa aataaaatgg 3421 ccttggagaa aagtcccaat cccaggcaag gggaagagga ggtggaggca aaaaaattgg 3481 aatctaaaga aaacatcaaa aaactttggc aaaacagagc caatacagag atagaggaat 3541 acaacaaaaa tgtggctaaa agctttaatg agaaagaaag ccccaaacag cagacaagaa 3601 atgaaacccc aacaacagaa gataatccaa aagcttttaa gaaggaggag gaaaccgatg 3661 aaatcactca gctacgaagg aaggagattc ctgtcgaaga aaaaccaaaa gaattgccca 3721 gggtatatcg ctattctggt ccacccagca taaatttctc cacctggagt gaaagaccca 3781 aggtgcaggt ggccatcaaa aatgagggcg actatatctt tggaggcaag tccattgaaa 3841 acaaggccat tgaaaacaaa acagtgcctc gtagctatcg catgtccacc ccactcaatt 3901 tcaatgaacc aaccacacaa gaatccaaag ttttgccttc tgtggctccc aagccggcga 3961 caataaaacg catgggtata cccgaaaagg aatttaaggt accagttatg gtgaaaccca 4021 ttaaggatgt catcgttgaa agtactcatg aacagaaaac caaagtaacc gcaaatggtg 4081 aagagcagaa tccaaaaact cctgcaaccc caagtgaaac tgcgaaaccc atgctccaag 4141 tagctgcaaa acctcagagc cctgttctac acaagccacc cactcctgtt aaagtcatat 4201 caaatggagg tcaaagacta tcgctgcata gacccaccat tgaatcggta ctcaaacctc 4261 aaactcaaac catagtcaat acacataccc ataactctac actaccgcgt accaataaac 4321 gcttctccac ttccctatcc accacctcca acaccacaag catcacaaat ggcgcacaaa 4381 cttcagcaac tccaataacg ccaggaccac agcttttacg ctctacctct acaaagcgcg 4441 aggaaaggga aaccaaatcc atgttcatac caaatgaggc cccttctgcg ccagcaccat 4501 ttggccaaaa tactttgaga cgcactggct tcaaagagaa aatcatggcc aaagatgagg 4561 aggagcaaca aaaagccata agcactagct ctatatcctt agcaaagaca ccaaccacaa 4621 atgccaccac acccagcaaa gctttaacaa atggtgaatt gaaattcacc acggcggcga 4681 agtttgaaaa gaagcctaca aacacaataa cagcaacaac aacaacaacg agtgccaaat 4741 tacatttaaa tttgcaaaaa tccacatcga ttacagtcac caacagcagc agcagcagca 4801 tcatcacacc tcccacacct tcgcttaagc caaaacccca tacaccaaaa actgccccga 4861 tactggcgac agcatcccaa ccgcccccac ctccaccgcc tgcaatggcc tacaaattaa 4921 aacctgtgac tgcagtgcgg acacccacag cctcagaaga tcccagagat cagttactgg 4981 cagctattcg gaacttcaaa aaggatgaac taaagagagc gtaaaatatt aacaaaaaca 5041 actttcttaa aattcaacac tctagtgaat attggttcta aaccaagctt tcttctttac 5101 aataatttat gatttaaaaa tctgttttag caacttaagt cacaaactaa tttaatttaa 5161 tatatattta gctaatagaa aatacatagg cgattcttat ttctttgtaa agtggaaaaa 5221 cccaagcaaa attttcaaaa aaaaaaaaac aaccatatga tatgtttgat atataaataa 5281 tatattgttt atgtagtttt taagtttatt aaattctgtt aatgtcaact ttaaccctct 5341 acaataggta tctggtcttt attaattcta tctataatat attttttcta tttaaagaaa 5401 acgattttat gtgagtgtgc tctccaatga aagtttttaa ctttcattct ggttgagttg 5461 gccacattgt taataagtgt aaaatattat tataattatt attattttta ttgc