Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_059366447 3540 bp mRNA linear INV 02-SEP-2023 (LOC106085209), mRNA. ACCESSION XM_059366447 VERSION XM_059366447.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq; corrected model. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 1 indel ##RefSeq-Attributes-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-839 OY720438.1 135071695-135072533 c 840-1067 OY720438.1 135071394-135071621 c 1068-1277 OY720438.1 135064621-135064830 c 1278-1278 "N" 1-1 1279-1370 OY720438.1 135064529-135064620 c 1371-1499 OY720438.1 135064351-135064479 c 1500-1631 OY720438.1 135063727-135063858 c 1632-1776 OY720438.1 135063510-135063654 c 1777-3540 OY720438.1 135055537-135057300 c FEATURES Location/Qualifiers source 1..3540 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3540 /gene="LOC106085209" /note="DNA-binding protein Ewg; The sequence of the model RefSeq transcript was modified relative to its source genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins" /db_xref="GeneID:106085209" CDS 48..3314 /gene="LOC106085209" /note="The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon" /codon_start=1 /product="LOW QUALITY PROTEIN: DNA-binding protein Ewg" /protein_id="XP_059222430.1" /db_xref="GeneID:106085209" /translation="MNVTTITTLPNATQAAVESITSHGHKQQQQTTYKIEMLDDSMAS DDDDDDLISSDGSIFDENELAQIAVQDDLANQLAAAGPVGVAAAAAIASSKKRKRQHS FETNPSVRKRQQNRLLRKLRGIIYEFTGRVGKQAVVLVATPGKPNTSYKVFGAKPLED VVRNLKNIVMDELENALAQQAPPPPQEDPSLFELPPLIIDGIPTPVEKMTQAQLRAFI PLMLKYSTGRGKPGWGREATRPPWWPKELPWANVRMDARSEDDKQKISWTHALRKIVI NCYKYHGREDLLPTFADEDDKVSQLISHEEEDDEEEVIVQPVHNNTATTIQTVTATPT TNANSNQQVNVVKINSSGTVITTTNPHNPNNPGPTIIQSTNDQHITTTARLPASTKIE LCPAPMAQITTHHQQQTQXAASSATNTAAATTTTTTAAATSSPSTAAATQQQQQHHQQ QTVQAQQIHTTTNAAQTIANAQVCIEPMTLGDVDYTTQTVLSTIQNADGTVSLIQVDP NNPIITLPDGTTAQVQGVATLHQGEGGATIQTVQSLGDVNGHENMTVDLTEATVAQDG QIYITTEDGQGYPVSVSNMITVPVSASMYQSMMANIQQIHTNSDGTVCITPMQVDSHT SNSNSNSDSNNRHSPNEAGNGGGHSSSNSNNSAANNNTSSNSNNATIIAAGPHQQQYQ CYSIMAASPLATTAAAAQRLLANSGLSQAHALVQSLSLNSNNNNNNNNSGSSSNSNNS DNSHNHNNHNNSNNGSSCNNNLISTNANNIRCQIINASSSLLANQNSSSHQQMATQQH HHHLQHHQHQQAAAAFINQQSLANVLQNGTAKVFIAANPAHLSLTAAAAANIFNSNNN NNDATATNNNNNNGSNSNIKIATALPIVVATTGNPHAHHQHYHQQATAAIIAAAGGVG AGAGFGLGKHRSRNSNSQHSAGGFAMKTSHKRRKHNNFAAKVLPIKIEEQDCNSAETD TSSLMHHNNNSNNNSGSGGGSGNIINTTTTQNAEGLLNIQILESSSERTLCHAEDGGV TADDADGVGGGADDNDDVGNHAGGGAVLGVCHVGNVRMGNRLLSVDVSKTIKLESIDS " ORIGIN 1 aaaccatcaa ctagagacac caaacggtcg gtcgcttagc caaaattatg aatgtgacca 61 ctataactac tttgcccaat gcaacgcagg cggcagtgga aagtattaca agccatggcc 121 acaaacaaca gcaacagacc acatataaaa tcgaaatgct cgacgatagt atggcctcgg 181 atgatgacga cgatgatctg attagcagcg atggcagcat atttgatgag aacgaattgg 241 cccaaatcgc tgtacaggat gatttggcca atcaattggc agctgcagga ccagttggtg 301 ttgcagctgc agcagccatt gcctcatcaa agaaacgcaa aaggcaacat tcgttcgaaa 361 cgaatccgtc ggtgcgtaaa cgacaacaga accgtttgct gcgcaaattg cgcggcataa 421 tatacgagtt cacaggacgt gtgggcaaac aggcggtggt gctggtggcc acgcctggca 481 agcccaatac cagctacaaa gtgttcggtg ccaaaccctt agaggatgta gtacgtaatc 541 ttaagaatat tgttatggat gagctggaaa atgctttggc acaacaggct cctcccccac 601 cgcaagaaga tccctcactg tttgaattgc cgcctctgat tatcgatggt atacccacac 661 cagtggaaaa gatgacccag gcccagctga gagcctttat acccttgatg ttgaaatatt 721 ccacaggtcg tggtaagccg ggatggggtc gtgaggccac aagaccacca tggtggccca 781 aagaattgcc ttgggccaat gtgcgcatgg atgccagatc cgaagatgac aaacaaaaga 841 tttcctggac tcatgctttg cgtaaaattg ttataaactg ttataaatat catggacgtg 901 aggatttgtt gcccacattt gccgacgaag atgataaagt ctcccaattg atctcacacg 961 aagaagagga cgatgaagaa gaggtgattg tacaacctgt ccataataac acagctacta 1021 ccatacaaac tgtaacagct acaccaacta ctaatgccaa ctctaatcaa caagttaatg 1081 tggtcaagat caatagttcg ggcacagtga ttaccacaac aaatccacac aatcccaata 1141 atccaggacc caccataata caaagtacga atgatcagca tataacgaca acagctagat 1201 tgccggcatc aacgaaaatt gaattgtgtc ctgctccgat ggctcaaatt acaacacatc 1261 atcagcagca aacacagnca gcagcatcat cagcaacaaa cacagcagca gcaacaacaa 1321 caacaacaac agcagcagca acatcatcac catcaacagc agcagcaaca cagcagcagc 1381 aacaacatca tcagcaacag acagtgcagg ctcaacaaat ccataccaca acgaatgcag 1441 cacagaccat agcaaatgct caagtttgca tagagcccat gaccttggga gatgtggatt 1501 acaccacgca aacagttcta tctaccatac aaaatgctga tggcacagtg tctctgatac 1561 aggttgatcc caataatcct ataatcactt tgcccgacgg cactacggct caagtccagg 1621 gtgttgccac gttacatcaa ggtgaaggtg gtgccaccat acaaaccgta caaagcctgg 1681 gagatgttaa tggtcatgag aatatgactg tggatttaac tgaagccaca gttgcacaag 1741 atggtcaaat ctatataacc acagaagatg gacaaggcta tcctgtgtcg gtcagcaaca 1801 tgatcacggt acccgtttca gcatccatgt atcaatcgat gatggccaat attcagcaaa 1861 ttcatacgaa cagtgatggt accgtgtgta taacaccaat gcaggtagat tctcatacca 1921 gtaatagtaa tagcaatagt gatagcaata ataggcatag tcccaacgaa gctggcaatg 1981 gtgggggcca tagcagtagc aacagcaaca actctgctgc gaataacaat acaagtagta 2041 atagtaataa tgccacaata attgcggcag gaccccatca acagcaatat caatgctatt 2101 ccataatggc agcatcaccc ttagccacaa cggcagcggc agcccaacgt ctattagcca 2161 attcgggact gagtcaagct catgcattgg tgcagagttt aagtttgaat agtaataata 2221 acaataacaa caataatagt ggtagtagca gcaacagcaa caacagtgat aatagtcata 2281 atcataataa tcataataat agtaataacg gtagtagttg caacaacaat ttaattagta 2341 caaatgccaa taatatacgt tgccaaataa taaatgcctc ttctagttta ttagcaaatc 2401 aaaattcttc tagtcaccaa cagatggcaa cacagcagca ccatcatcat ttgcaacacc 2461 atcagcacca acaggctgcg gctgccttca taaatcaaca aagtctagca aatgttttgc 2521 aaaatggaac agcaaaagtt tttattgctg caaatccggc ccatttaagt ttaactgcag 2581 cagctgcagc aaatattttc aatagcaata acaacaataa cgatgccaca gctacaaata 2641 ataacaataa taatggcagc aacagcaaca taaaaattgc aacagccttg cccatagtag 2701 ttgcaacaac gggtaatccc catgcccacc atcagcatta tcaccagcag gcaacagcag 2761 ccattatagc tgctgctggc ggagttggtg ctggtgctgg ttttggcctt ggaaaacatc 2821 gaagccgtaa cagcaacagc caacatagtg ctggtggctt tgccatgaaa accagccaca 2881 aacgtcgtaa acataacaac tttgctgcca aagtgttgcc gattaaaatt gaagaacaag 2941 attgcaatag tgccgaaacg gacacctcat ctttaatgca tcataataat aatagcaata 3001 acaacagtgg ctcaggtggc ggcagcggca atattattaa caccaccaca actcaaaatg 3061 ccgaaggcct tttgaacata caaattcttg agagttcgtc ggagaggact ttgtgtcatg 3121 cagaagatgg tggtgttact gcagatgatg ccgatggtgt tggtggtggt gcggacgaca 3181 atgatgatgt gggaaatcat gctggcggtg gtgctgtcct aggtgtctgt catgttggta 3241 atgttcgcat gggcaatcgt cttctcagtg ttgatgtttc aaaaaccatt aaacttgagt 3301 ccatagatag ttaatttaat tacaaaaaca gcataggact caaaggcaat caaagtgttt 3361 aagaagattt tcacgaagga tggaagggaa gatgaatgtt ttctttaaag aacttaagaa 3421 ggaagtagat tttcaagtta tcgaattgct cagaattgtg ataatttaaa ggctaagctt 3481 tgaggatatc tatttcggaa agaaaaagaa agtctgaaaa cggaaaacga tttttatcat