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LOCUS XM_059366425 5596 bp mRNA linear INV 02-SEP-2023 transcript variant X3, mRNA. ACCESSION XM_059366425 VERSION XM_059366425.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5596 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5596 /gene="LOC106088340" /note="MICAL-like protein 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106088340" CDS 362..4720 /gene="LOC106088340" /codon_start=1 /product="MICAL-like protein 1 isoform X3" /protein_id="XP_059222408.1" /db_xref="GeneID:106088340" /translation="MAERRGTKALELWCRRMTEGYPGVKVDNMTTSWRDGLAFCAMIH HFRPDLIDFDKLNKADVYYNNALAFTTAEKYLGIPALLDADDMAAYEVPDRLSILTYL SQYYQAFAAQNSHNRLKRPSSSATEKTQISKPTGPPPKMAHVVGVPRRDPCRKCQLPV FLAERLLVGKKVYHRTCLKCARCGSQLTPGSFYETEVDDQYCCETCPDEEITATNVDG GGDVAAASSVPHPSPPSAEISTEVQLRSKLDGDVSPTITRSVRSSIRDRLAFFEQKQQ QTTEKQREGSAESDSKLLQKSLSDEEKSKSLQRMENNSSAMATTSYKMNSALSNFLND TVDNEPEDQNQAEEDEESLSLTSSAQNSKMDTDSEETDDLTSVSLPPELPKSLPPLVV EQESADEKQKKEEKEEAKRFTASAQLILGGNSTTDSSHLKADEEENIIRSRSQSRSPT NSTGRQTSELKISLRSSLKSHDKTNNNTELEDNDDKAKTIAAQQMAPQPNLTSQMTET IQQIELENNLACNETNDNDCVTKDKAKVNDSMMAMETEIEAAQQLESTTTTTTTALEE VNSTKPSGEKIETSDKPIGETENEVELRTKSLKDNHNTLHASTPCVEDKETTQRLSVV RARLQQFEVITNNEKAKESSPISAATKAKENLNISTPPLTTPPKTPIAPMPIITTTAP TTPPMELKEDESLSRSMEDEQVCATSITQKDPNEDTTMVQMDDDTNTETVTESLEKPP NEKPIQEVPLVMETKDNELLEDKHKSIEKEEAKEEEEEKESAKVEPKVSPPSSSPLRN SSTPNKPPLEEYPEDLNPFKSDDEDEPNEENKENVVLRKPPIPKQPAKVISCNPFDSS DDEIELDKSQNSTISTPKIPPPRPPPPRISRNPFGSEDEDEDLSKASQLRRSSLTASQ SKRTPVPTPRTNVSSNNSLNLSAGGTIRSRKSRRAPLPPAPVKELFPSSETLNTSSKA STPSSSTVGTPKSGRKKRPAPAPPKPARLDPSTAIPQIQAPESLNLNTQSKNLLSYPL QSELDSKLSDEEKALLEGKTNAAELAVLSQDEDSRRNSKRLIPLDKELLEEHANESQC DDLKHQQQHLQKSHHHVQESEPNVVYRRLLIPHNLDTPTHESNPLLDELNNSSMLGER QLEKLKDNKEANNRNRQSQISAASSGNEDNDPLFNKSVHGKWKRRKGPAPALPIPPRR VLQMLPLQEIKHELDIIEVQQQGLEKQGVILEKMIRDRCEGENGEPLNAAGEIPPTLD GTSGGVGHQSPALENSKEVENLILQLFELVNEKNELFRRQAELMYLRRQHRLEQEQAD LEYEIRVLMAQPERNKTDSDKAREEAFIERLIEVVQLRNEVVECLEMDRIREAEEDQS IKQRLESHIANKRDDEPETKKSSTSKLSKKEKKKQKESKKLAKNKKLDADKDADESEL SLDKQKTKKKKKLLIF" polyA_site 5596 /gene="LOC106088340" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agaactcctg aatttgactg attcatcatt tctcgcgtaa taatatcttt atgctagacc 61 agaaaacaat aaattttatt ggtgctctac aaaagaagaa gaaacacgga attaaaagca 121 aaaaaatccc ataactgcca tctaaaaaat aaataataat cgtatatctc atcgataata 181 attaaacgcg tgcctttatt cataccaatt tcatttcata gtttaaacag cgtttaattt 241 ctttggcaaa tatttgacat ttgagacaaa tcaaagccaa cagtgtaaca aaccaaaata 301 agagtctttt tgacctcctc gccccataag aaaatcgcat acaaaagtat ttgaagaaaa 361 aatggctgaa cgtcgtggta caaaagcttt ggaattatgg tgccgtcgca tgacagaagg 421 ctatccaggt gttaaggttg ataatatgac aacatcatgg cgtgatgggc ttgcgttttg 481 tgcaatgata catcatttta ggccagattt aattgatttc gataaactaa ataaagccga 541 tgtctactac aacaatgcat tggccttcac aacagctgaa aaatatttgg gtatccctgc 601 actgcttgac gccgacgata tggctgccta tgaagttccc gacagattat ccatcctgac 661 ctatttgtca cagtactatc aagcgtttgc agcacaaaat tcccacaatc gtctgaagcg 721 tccttcatca tctgccactg aaaagacaca aatttccaaa cccactggac caccgcccaa 781 aatggcccat gtggtcggcg tccccaggcg cgatccctgt cgtaaatgcc aactgcctgt 841 ctttctggca gaacgtctcc tggtaggcaa aaaagtctat catcgaacat gtctaaaatg 901 tgcccgatgt ggatcccaat tgacaccagg aagtttttat gaaactgaag tggatgatca 961 atactgctgt gagacatgtc ccgatgaaga gatcaccgcc acaaatgtgg atggtggagg 1021 tgatgttgct gctgcaagca gtgtcccaca tccatcgccg ccttcggctg aaatttccac 1081 agaagttcaa ttaagaagta aattggatgg tgatgtatca cccaccataa cacgttcggt 1141 acgcagttcc ataagagatc gtttggcatt tttcgaacaa aaacaacaac aaacaacgga 1201 aaagcagcga gagggttctg cagagagcga tagtaaactt ttacaaaaaa gtctaagcga 1261 tgaggaaaaa tccaaaagtc tacaaagaat ggagaataat tcatcggcca tggctactac 1321 atcttataaa atgaattcag ctttaagtaa ttttctcaat gacacagtgg ataatgagcc 1381 tgaggatcaa aatcaggcag aagaggatga ggaaagcctg tcattgacat catcggcaca 1441 aaattccaaa atggatactg attcagagga aactgatgat ttaacttcgg tatcactgcc 1501 tccggagtta cccaaatctt tgccaccctt agtggtggaa caggaatcag ctgatgagaa 1561 gcaaaagaaa gaggagaaag aggaagccaa acgtttcaca gcctcagctc aattgatatt 1621 ggggggaaat tccaccacag attcctccca tttgaaggct gatgaagaag aaaatatcat 1681 acgttcaaga tcgcaatccc gctcccccac caactcaaca ggcagacaaa cctcggaatt 1741 gaaaattagt cttagatcct ctttgaagtc ccacgataaa acgaataata atactgagct 1801 ggaagataat gatgataaag caaaaactat agctgcccag caaatggccc ctcaaccaaa 1861 cttaacatcc caaatgacgg agacaataca gcaaatagaa ttagaaaata atttagcatg 1921 taatgaaact aatgataatg attgtgttac caaagacaaa gctaaggtga atgattccat 1981 gatggcaatg gaaacagaaa tcgaggctgc acagcagtta gagagcacaa ctacaaccac 2041 aacaacggca cttgaagaag tgaacagcac taagccttct ggagagaaaa ttgaaaccag 2101 tgacaaacca attggagaaa ccgaaaatga ggttgaatta cgcacaaaat ctttgaagga 2161 taaccacaac accctacatg cttcgacacc ttgcgtggag gataaggaga ccacccaaag 2221 gcttagtgtg gtacgtgctc gcctgcaaca atttgaagta attacaaata atgaaaaagc 2281 aaaagaatca tcacctatat cagccgctac taaggcaaag gaaaatttga atatttcaac 2341 tccaccatta acaacaccac caaaaacacc catagcacca atgccaatta taacaacaac 2401 agcacctaca acacccccta tggaattaaa agaagatgag tctttaagcc gctcaatgga 2461 agatgagcaa gtgtgtgcta catctataac acagaaagat ccaaatgaag atacaaccat 2521 ggtgcaaatg gatgatgaca ccaacactga aactgtaact gaaagtctgg aaaagccgcc 2581 taatgagaaa ccaatacaag aagtgccttt agtaatggaa acaaaagaca atgaactatt 2641 agaagataag cacaagtcaa ttgaaaagga agaagcgaaa gaagaagagg aagaaaagga 2701 aagcgcaaaa gttgagccaa aagtctcacc accttcttct tcacctctca gaaatagctc 2761 tacacccaat aaaccaccct tggaagaata tcctgaagat ttgaatccct tcaagtcgga 2821 cgatgaagat gagcccaacg aagagaataa agaaaatgtg gttttacgta aacctcccat 2881 acccaaacaa ccagccaagg tcataagttg taatcctttt gattcctcag atgatgaaat 2941 tgaattggat aagtcgcaaa attcgactat atcaactccc aagattccac cacccaggcc 3001 accaccacca cgcatttcta ggaatccctt tggcagtgag gacgaagatg aggatctatc 3061 caaagcatca caattgcggc ggtcttcatt gacagcgtcg caaagtaagc gaacaccggt 3121 gcccacaccc aggaccaatg tatcctccaa caattccctg aatctctcgg cgggaggcac 3181 cataaggtcg agaaagtctc gtagggcccc tctgccaccg gctcccgtca aggaactgtt 3241 tccctcttcg gagaccttga ataccagttc caaagcctcc acacccagtt ccagcactgt 3301 gggcactccc aagtcaggtc gcaagaagag acctgcccct gctccaccaa agccggccag 3361 attggatccc tcaacagcca taccccagat acaagcaccc gaatcactaa acctcaatac 3421 acagtcaaaa aacttgctta gttaccctct gcagagtgaa ttggactcga aattatccga 3481 cgaagagaaa gctttgttgg agggtaaaac taatgcggca gaacttgcag ttctctccca 3541 agacgaggat agcaggcgta actccaagcg tctcataccc ctggacaagg agctgctgga 3601 ggagcatgcc aatgaaagtc aatgtgatga cttgaaacat caacaacaac atttacaaaa 3661 atcccatcac catgttcaag aatccgaacc caatgtggta tatcgccgtc tgctaatacc 3721 tcacaacttg gatactccca ctcatgaatc gaatcctttg ttggatgaac tcaacaactc 3781 ctccatgctg ggtgagcgtc aactggagaa gctcaaagat aacaaagagg ccaataatcg 3841 caatagacaa tctcaaatat ccgccgcctc ttccggtaat gaggacaatg atcccctctt 3901 caataaatcc gtccatggca aatggaaaag gcgcaaaggt cccgctcctg ccttacccat 3961 accccccagg cgcgtattgc aaatgctacc cctgcaagag atcaaacatg aattggacat 4021 cattgaggtg caacaacagg gtctggaaaa gcagggtgtc attctggaga aaatgattcg 4081 tgatcgttgt gaaggcgaga atggtgaacc tttaaatgcc gccggtgaaa taccacccac 4141 cttggacggt actagtggag gtgttggcca tcaatcgcct gctttggaaa actccaaaga 4201 ggtggaaaat cttatacttc aactattcga gttggtcaat gagaagaatg aattgttccg 4261 gcggcaagct gaacttatgt atctacgccg tcaacatcgc ttggaacaag aacaagccga 4321 tttggaatat gaaatacgtg tgctaatggc acaaccggaa cgcaataaaa ctgattcgga 4381 taaggccaga gaggaagcct tcatcgaacg tctaattgaa gtagtgcaat tacgtaatga 4441 agttgtggaa tgcttggaaa tggatcgcat tcgagaagcc gaagaagatc aaagtataaa 4501 acaacgtttg gaatcacaca tagccaataa gagggacgat gaacccgaaa ctaaaaagtc 4561 ctctacatcg aagctatcga aaaaggaaaa gaaaaaacaa aaagaatcca aaaaattggc 4621 gaaaaataaa aaattagatg ctgataagga tgctgatgaa tccgaattga gtttggacaa 4681 acaaaaaacc aaaaagaaaa agaagctctt aatcttctaa acaactcaac tcagcagctc 4741 agctccaaaa ctctgggtaa ttccttcaac taagtcgttc gttctcttct ctgtatttta 4801 tgtgtgataa aaaacaaatt ctaatggcca atcttgttta aacaaagaaa aattatatat 4861 tgtcattact tttagttgtc ttaacagttt tagtgtgtga aaaaaaacct agttttttgt 4921 gtttggatta attatttatt tagatcttag agcggcgctc attatgtcac ttgaaattaa 4981 aaattcctgt tctcaacact tgtagtattt ttaatgtagt cctcaccaca ccactccacc 5041 actaaaattt atagcattat agcttatttt gttatttgaa attaaaaatt tcttcaaatg 5101 ttttttcttt tttttttctt aaaacaaaag aaataaaaat taaaagctcc ataattattt 5161 gcaatacata tatttttttt acatataaat attctatcta tatttagtat ttactttctt 5221 attcataagt ctaatttaaa tcaaaaaaaa tatgaaattc attaattttt ttatttttgt 5281 ttttcaaaat ctcaataaaa agattacagt aatttttctc tatttggatt tttttatatg 5341 aaaatgttct atttattttt tttttgtata attctaagca ttaatgttcc cctctacgag 5401 gtctctgcac tgtatgtcct ttagctgtta acgcccttat atttgcattt tgggagctat 5461 aagcgtgcat tattctcgtt tcttattctt tgttttgata ttctattact gcatatacat 5521 atgatgattt catcgaaatg tgtgtttatt tttattatta ttgaaaaata taataaaata 5581 gaatgctttg ctttga