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LOCUS XM_059366424 5695 bp mRNA linear INV 02-SEP-2023 transcript variant X2, mRNA. ACCESSION XM_059366424 VERSION XM_059366424.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5695 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5695 /gene="LOC106088340" /note="MICAL-like protein 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106088340" CDS 362..4819 /gene="LOC106088340" /codon_start=1 /product="MICAL-like protein 1 isoform X2" /protein_id="XP_059222407.1" /db_xref="GeneID:106088340" /translation="MAERRGTKALELWCRRMTEGYPGVKVDNMTTSWRDGLAFCAMIH HFRPDLIDFDKLNKADVYYNNALAFTTAEKYLGIPALLDADDMAAYEVPDRLSILTYL SQYYQAFAAQNSHNRLKRPSSSATEKTQISKPTGPPPKMAHVVGVPRRDPCRKCQLPV FLAERLLVGKKVYHRTCLKCARCGSQLTPGSFYETEVDDQYCCETCPDEEITATNVDG GGDVAAASSVPHPSPPSAEISTEVQLRSKLDGDVSPTITRSVRSSIRDRLAFFEQKQQ QTTEKQREGSAESDSKLLQKSLSDEEKSKSLQRMENNSSAMATTSYKMNSALSNFLND TVDNEPEDQNQAEEDEESLSLTSSAQNSKMDTDSEETDDLTSVSLPPELPKSLPPLVV EQESADEKQKKEEKEEAKRFTASAQLILGGNSTTDSSHLKADEEENIIRSRSQSRSPT NSTGRQTSELKISLRSSLKSHDKTNNNTELEDNDDKAKTIAAQQMAPQPNLTSQMTET IQQIELENNLACNETNDNDCVTKDKAKVNDSMMAMETEIEAAQQLESTTTTTTTALEE VNSTKPSGEKIETSDKPIGETENEVELRTKSLKDNHNTLHASTPCVEDKETTQRLSVV RARLQQFEVITNNEKAKESSPISAATKAKENLNISTPPLTTPPKTPIAPMPIITTTAP TTPPMELKEDESLSRSMEDEQVCATSITQKDPNEDTTMVQMDDDTNTETVTESLEKPP NEKPIQEVPLVMETKDNELLEDKHKSIEKEEAKEEEEEKESAKVEPKVSPPSSSPLRN SSTPNKPPLEEYPEDLNPFKSDDEDEPNEENKENVVLRKPPIPKQPAKVISCNPFDSS DDEIELDKSQNSTISTPKIPPPRPPPPRISRNPFGSEDEDEDLSKASQLRRSSLTASQ SKRTPVPTPRTNVDFYGSANSLHSNHNNSASTTTTPNNFLRNSDIRSSNNSLNLSAGG TIRSRKSRRAPLPPAPVKELFPSSETLNTSSKASTPSSSTVGTPKSGRKKRPAPAPPK PARLDPSTAIPQIQAPESLNLNTQSKNLLSYPLQSELDSKLSDEEKALLEGKTNAAEL AVLSQDEDSRRNSKRLIPLDKELLEEHANESQCDDLKHQQQHLQKSHHHVQESEPNVV YRRLLIPHNLDTPTHESNPLLDELNNSSMLGERQLEKLKDNKEANNRNRQSQISAASS GNEDNDPLFNKSVHGKWKRRKGPAPALPIPPRRVLQMLPLQEIKHELDIIEVQQQGLE KQGVILEKMIRDRCEGENGEPLNAAGEIPPTLDGTSGGVGHQSPALENSKEVENLILQ LFELVNEKNELFRRQAELMYLRRQHRLEQEQADLEYEIRVLMAQPERNKTDSDKAREE AFIERLIEVVQLRNEVVECLEMDRIREAEEDQSIKQRLESHIANKRDDEPETKKSSTS KLSKKEKKKQKESKKLAKNKKLDADKDADESELSLDKQKTKKKKKLLIF" polyA_site 5695 /gene="LOC106088340" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agaactcctg aatttgactg attcatcatt tctcgcgtaa taatatcttt atgctagacc 61 agaaaacaat aaattttatt ggtgctctac aaaagaagaa gaaacacgga attaaaagca 121 aaaaaatccc ataactgcca tctaaaaaat aaataataat cgtatatctc atcgataata 181 attaaacgcg tgcctttatt cataccaatt tcatttcata gtttaaacag cgtttaattt 241 ctttggcaaa tatttgacat ttgagacaaa tcaaagccaa cagtgtaaca aaccaaaata 301 agagtctttt tgacctcctc gccccataag aaaatcgcat acaaaagtat ttgaagaaaa 361 aatggctgaa cgtcgtggta caaaagcttt ggaattatgg tgccgtcgca tgacagaagg 421 ctatccaggt gttaaggttg ataatatgac aacatcatgg cgtgatgggc ttgcgttttg 481 tgcaatgata catcatttta ggccagattt aattgatttc gataaactaa ataaagccga 541 tgtctactac aacaatgcat tggccttcac aacagctgaa aaatatttgg gtatccctgc 601 actgcttgac gccgacgata tggctgccta tgaagttccc gacagattat ccatcctgac 661 ctatttgtca cagtactatc aagcgtttgc agcacaaaat tcccacaatc gtctgaagcg 721 tccttcatca tctgccactg aaaagacaca aatttccaaa cccactggac caccgcccaa 781 aatggcccat gtggtcggcg tccccaggcg cgatccctgt cgtaaatgcc aactgcctgt 841 ctttctggca gaacgtctcc tggtaggcaa aaaagtctat catcgaacat gtctaaaatg 901 tgcccgatgt ggatcccaat tgacaccagg aagtttttat gaaactgaag tggatgatca 961 atactgctgt gagacatgtc ccgatgaaga gatcaccgcc acaaatgtgg atggtggagg 1021 tgatgttgct gctgcaagca gtgtcccaca tccatcgccg ccttcggctg aaatttccac 1081 agaagttcaa ttaagaagta aattggatgg tgatgtatca cccaccataa cacgttcggt 1141 acgcagttcc ataagagatc gtttggcatt tttcgaacaa aaacaacaac aaacaacgga 1201 aaagcagcga gagggttctg cagagagcga tagtaaactt ttacaaaaaa gtctaagcga 1261 tgaggaaaaa tccaaaagtc tacaaagaat ggagaataat tcatcggcca tggctactac 1321 atcttataaa atgaattcag ctttaagtaa ttttctcaat gacacagtgg ataatgagcc 1381 tgaggatcaa aatcaggcag aagaggatga ggaaagcctg tcattgacat catcggcaca 1441 aaattccaaa atggatactg attcagagga aactgatgat ttaacttcgg tatcactgcc 1501 tccggagtta cccaaatctt tgccaccctt agtggtggaa caggaatcag ctgatgagaa 1561 gcaaaagaaa gaggagaaag aggaagccaa acgtttcaca gcctcagctc aattgatatt 1621 ggggggaaat tccaccacag attcctccca tttgaaggct gatgaagaag aaaatatcat 1681 acgttcaaga tcgcaatccc gctcccccac caactcaaca ggcagacaaa cctcggaatt 1741 gaaaattagt cttagatcct ctttgaagtc ccacgataaa acgaataata atactgagct 1801 ggaagataat gatgataaag caaaaactat agctgcccag caaatggccc ctcaaccaaa 1861 cttaacatcc caaatgacgg agacaataca gcaaatagaa ttagaaaata atttagcatg 1921 taatgaaact aatgataatg attgtgttac caaagacaaa gctaaggtga atgattccat 1981 gatggcaatg gaaacagaaa tcgaggctgc acagcagtta gagagcacaa ctacaaccac 2041 aacaacggca cttgaagaag tgaacagcac taagccttct ggagagaaaa ttgaaaccag 2101 tgacaaacca attggagaaa ccgaaaatga ggttgaatta cgcacaaaat ctttgaagga 2161 taaccacaac accctacatg cttcgacacc ttgcgtggag gataaggaga ccacccaaag 2221 gcttagtgtg gtacgtgctc gcctgcaaca atttgaagta attacaaata atgaaaaagc 2281 aaaagaatca tcacctatat cagccgctac taaggcaaag gaaaatttga atatttcaac 2341 tccaccatta acaacaccac caaaaacacc catagcacca atgccaatta taacaacaac 2401 agcacctaca acacccccta tggaattaaa agaagatgag tctttaagcc gctcaatgga 2461 agatgagcaa gtgtgtgcta catctataac acagaaagat ccaaatgaag atacaaccat 2521 ggtgcaaatg gatgatgaca ccaacactga aactgtaact gaaagtctgg aaaagccgcc 2581 taatgagaaa ccaatacaag aagtgccttt agtaatggaa acaaaagaca atgaactatt 2641 agaagataag cacaagtcaa ttgaaaagga agaagcgaaa gaagaagagg aagaaaagga 2701 aagcgcaaaa gttgagccaa aagtctcacc accttcttct tcacctctca gaaatagctc 2761 tacacccaat aaaccaccct tggaagaata tcctgaagat ttgaatccct tcaagtcgga 2821 cgatgaagat gagcccaacg aagagaataa agaaaatgtg gttttacgta aacctcccat 2881 acccaaacaa ccagccaagg tcataagttg taatcctttt gattcctcag atgatgaaat 2941 tgaattggat aagtcgcaaa attcgactat atcaactccc aagattccac cacccaggcc 3001 accaccacca cgcatttcta ggaatccctt tggcagtgag gacgaagatg aggatctatc 3061 caaagcatca caattgcggc ggtcttcatt gacagcgtcg caaagtaagc gaacaccggt 3121 gcccacaccc aggaccaatg ttgatttcta tggcagcgcc aattcattgc acagcaatca 3181 caacaactct gcatccacaa caacaacacc taataatttc ttgcgtaatt ccgatatcag 3241 atcctccaac aattccctga atctctcggc gggaggcacc ataaggtcga gaaagtctcg 3301 tagggcccct ctgccaccgg ctcccgtcaa ggaactgttt ccctcttcgg agaccttgaa 3361 taccagttcc aaagcctcca cacccagttc cagcactgtg ggcactccca agtcaggtcg 3421 caagaagaga cctgcccctg ctccaccaaa gccggccaga ttggatccct caacagccat 3481 accccagata caagcacccg aatcactaaa cctcaataca cagtcaaaaa acttgcttag 3541 ttaccctctg cagagtgaat tggactcgaa attatccgac gaagagaaag ctttgttgga 3601 gggtaaaact aatgcggcag aacttgcagt tctctcccaa gacgaggata gcaggcgtaa 3661 ctccaagcgt ctcatacccc tggacaagga gctgctggag gagcatgcca atgaaagtca 3721 atgtgatgac ttgaaacatc aacaacaaca tttacaaaaa tcccatcacc atgttcaaga 3781 atccgaaccc aatgtggtat atcgccgtct gctaatacct cacaacttgg atactcccac 3841 tcatgaatcg aatcctttgt tggatgaact caacaactcc tccatgctgg gtgagcgtca 3901 actggagaag ctcaaagata acaaagaggc caataatcgc aatagacaat ctcaaatatc 3961 cgccgcctct tccggtaatg aggacaatga tcccctcttc aataaatccg tccatggcaa 4021 atggaaaagg cgcaaaggtc ccgctcctgc cttacccata ccccccaggc gcgtattgca 4081 aatgctaccc ctgcaagaga tcaaacatga attggacatc attgaggtgc aacaacaggg 4141 tctggaaaag cagggtgtca ttctggagaa aatgattcgt gatcgttgtg aaggcgagaa 4201 tggtgaacct ttaaatgccg ccggtgaaat accacccacc ttggacggta ctagtggagg 4261 tgttggccat caatcgcctg ctttggaaaa ctccaaagag gtggaaaatc ttatacttca 4321 actattcgag ttggtcaatg agaagaatga attgttccgg cggcaagctg aacttatgta 4381 tctacgccgt caacatcgct tggaacaaga acaagccgat ttggaatatg aaatacgtgt 4441 gctaatggca caaccggaac gcaataaaac tgattcggat aaggccagag aggaagcctt 4501 catcgaacgt ctaattgaag tagtgcaatt acgtaatgaa gttgtggaat gcttggaaat 4561 ggatcgcatt cgagaagccg aagaagatca aagtataaaa caacgtttgg aatcacacat 4621 agccaataag agggacgatg aacccgaaac taaaaagtcc tctacatcga agctatcgaa 4681 aaaggaaaag aaaaaacaaa aagaatccaa aaaattggcg aaaaataaaa aattagatgc 4741 tgataaggat gctgatgaat ccgaattgag tttggacaaa caaaaaacca aaaagaaaaa 4801 gaagctctta atcttctaaa caactcaact cagcagctca gctccaaaac tctgggtaat 4861 tccttcaact aagtcgttcg ttctcttctc tgtattttat gtgtgataaa aaacaaattc 4921 taatggccaa tcttgtttaa acaaagaaaa attatatatt gtcattactt ttagttgtct 4981 taacagtttt agtgtgtgaa aaaaaaccta gttttttgtg tttggattaa ttatttattt 5041 agatcttaga gcggcgctca ttatgtcact tgaaattaaa aattcctgtt ctcaacactt 5101 gtagtatttt taatgtagtc ctcaccacac cactccacca ctaaaattta tagcattata 5161 gcttattttg ttatttgaaa ttaaaaattt cttcaaatgt tttttctttt ttttttctta 5221 aaacaaaaga aataaaaatt aaaagctcca taattatttg caatacatat atttttttta 5281 catataaata ttctatctat atttagtatt tactttctta ttcataagtc taatttaaat 5341 caaaaaaaat atgaaattca ttaatttttt tatttttgtt tttcaaaatc tcaataaaaa 5401 gattacagta atttttctct atttggattt ttttatatga aaatgttcta tttatttttt 5461 ttttgtataa ttctaagcat taatgttccc ctctacgagg tctctgcact gtatgtcctt 5521 tagctgttaa cgcccttata tttgcatttt gggagctata agcgtgcatt attctcgttt 5581 cttattcttt gttttgatat tctattactg catatacata tgatgatttc atcgaaatgt 5641 gtgtttattt ttattattat tgaaaaatat aataaaatag aatgctttgc tttga