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LOCUS XM_059366418 7696 bp mRNA linear INV 02-SEP-2023 (LOC106080759), transcript variant X4, mRNA. ACCESSION XM_059366418 VERSION XM_059366418.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7696 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7696 /gene="LOC106080759" /note="B-box type zinc finger protein ncl-1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106080759" CDS 1445..4897 /gene="LOC106080759" /codon_start=1 /product="B-box type zinc finger protein ncl-1 isoform X2" /protein_id="XP_059222401.1" /db_xref="GeneID:106080759" /translation="MATLEDFAPHILNSTTVTSNTSSATTNIATTADSSSCSFSTVLD SSSITAVAKALEASSFIATPSSASTVDSIVDKLVNSLDLNDTLIANGGCNPIAKDIKS ISSRSSSVAGSLTLGGLGGGNMFSEVFESNVGSELESGSLEDTSGSLCEGDVDKNCKI CSSRLQSPRVLSCLHVFCESCLCKLLNEDSSGGSLSSSSSTSSVGGELIPVSNSCGKS QIKCPVCKQITSVGPKGVKSLTCDYILTNILDLATIESEQLHCTSCKSKENAISRCND CANFLCSGCDNAHKYMRCFENHEVVKLEDLQKTSDGDKPLIIHKPLYCNVHTSENLKY YCFNCQIPVCNDCLIADHKGSEHHYDIIALAEKSVRGDVENLMKEAKSKVQYCDEADA NLSSALTELQTQHDSARDLIQETFENYKKVIEKCRDQALVELKKLHSERVLKIMDLMQ NIQNTMCKIDNTCKFTNRVLEQANAAEFLSMKKLIASQFINMINTTPKCDINYSLTFD TKPDKFEQLAQDTFGKFRTESTPPSPKESTPPPTLPGMPPNMINGRVGGSCSGGSGGA MNCSNSSQSQMASSVTASSPISLPTSMQSSFDGDIYALGNGFMMSNVLTPDSPPQGQS VLPPHHHQLQHQNSTSSHHSSVSGFNGIGSIASGNGNNLNNNMNNTSPAFNGSLGNTP LGSGPNGSLMGNNGLNGLNNSGPPAGMNALNNPLNNSLTAALNGPLGGNAGVAAVPPP GGFNSILEYNLSRLASLTENTPDTLNDPLVGSPSGPTNQSVVPAANAQNQPITLADIL SGDQRAFNNLQALAKLGLNNNDYCLSTAPSPSLPNLPPLCPGGGAGGSVDDMSIASFH APQQAQPTTTSIITGRNKATPMQIRCKFGSLGTSKGQFNSPHGFCLGVDEEIIVADTN NHRIEIFDKSGNLKFYFGVPGKEEGQLWYPRKVAVMHTNGKFVVCDRGNERSRMQIFS KSGHFMRKIAIRYIDIVAGLAVTSKGHIVAVDSVSPTVFVISEDGELVRWFDCSDYMR EPSDIAIRDNDFYVCDFKGHCVAVFHEDGTFQYRIGNEKVTCFPNGIDISNAGDILIG DSHGNRFHVACYSRDGVLQSEFECPHVKVSRCCGLKITSEGYVVTLAKNNHHVLVLNT LYVQ" ORIGIN 1 ccatagtctt ttctcagaga tacgtgtcga ttcgaccagc tcgtgtatga attcatttga 61 atgcgaacac gtttgtgaac atgcaaattt agctttgcaa cacagcaaca ctgactggaa 121 ggttaactca accctgtaac atagtgtaga aaagatacta caaaaatttt ttcacacacg 181 gactgagtga ttttcgtctg ccattaattt ttgtggaaaa atcatataat ggcaaaaagg 241 ctctgaacaa gcagcaggaa tacaaaggat atacggtttt gaacactatt gcagcggaga 301 tcaatcaatc aaccaagagc gggaaatatt ttctttctat cctgaaaaca agttggacta 361 taaagcggac aagaggtagc gttttgtgaa cattgtaatt cgttacattt ttttgctatt 421 cgtcgtcata accgcctcag tgtgcaacac cctgatataa caacaataac aacaacaaca 481 acaacataac cgccagtcat cgtcgaacgt ttgtgagttg gccaagtctg cgaattacct 541 aggccttttg tggtgggatc aaaggcaaat tgtttttgca agcgaagacg tagtagcatc 601 gttataacat catatttgca atacaacaat aactacaact atttaaaata aacatatata 661 tgtacacact tcacttcaaa cttagagagt aatttaaaga aaaaacaaaa aaaaaaacaa 721 aaatattgca aatagtaaca attttactac aaaaacacaa catatttcaa atatttcgtg 781 attctttcaa acaaccaaac aaaaatacaa aggaaaaaac aaatagaaaa aactcaattc 841 taaaacacca tttaaaaaaa gaaaaactaa aattgcagca aatagtaata ataatgataa 901 tagagaacca aacccattaa atgatattaa tcaacaatat ttaaaaacaa tcaaaccaca 961 atatttaatg aatatttatc aatgaagctt tttacacaat atttgctcta acgaataaag 1021 aaaaactaac taaagaagta agcataataa cgaaactcaa ttgaaacgcg taaaaatcac 1081 caactataga atcaatcaat agcgtaaaac agacatacaa aaacaacccc agtggctttt 1141 ggcgaaaaaa taaccctgct tcttgaaaat acatcagaga ttttgaaatc gcaccaccct 1201 gcttaattgg tatttttgaa gagcttgtgt actttttggt gaacttgtag caaccacaac 1261 aaaacaacca atcaaaaatt ctccaaggct ttagcacata cgtatatcag atcaaaaaga 1321 aagacaaact cgcagagtaa ataaaggcta tagaaggggc tcagacctct cagttgcaag 1381 cgtttaatct ccaacttcaa attcaaaaag ttacactgcg tcacgcgtca tagaggcttt 1441 atatatggca accttagagg attttgcacc acatatctta aatagcacca ccgtgacctc 1501 aaacacctcg tctgcgacca caaacattgc cactaccgcc gactcaagta gctgctcctt 1561 ttccaccgtc ttggactcgt catcgatcac ggctgttgcc aaagcattgg aagcttctag 1621 ttttatagcg accccatcta gcgcttccac tgtggattca atagttgaca agttggtcaa 1681 ctcgttggac ttgaacgaca ccttaatagc gaacggcggt tgtaatccca tagcaaagga 1741 tataaaaagc atttcttctc gttcttcgtc ggttgccggc agcttgaccc taggtgggct 1801 gggcggtggc aacatgttta gtgaagtgtt tgaaagcaat gtgggctctg agcttgagtc 1861 tggttccttg gaagacacgt cgggttcgtt gtgtgaaggc gatgttgata agaattgcaa 1921 gatttgcagt tcgcgcctgc agtcgcctcg tgttctatca tgccttcatg tcttttgtga 1981 gtcatgcctc tgtaagttac ttaacgaaga ttcctcggga ggcagtcttt cttcctcatc 2041 gtccacttct tcggtgggtg gggaattgat tcccgtttcc aattcttgcg gaaaatcgca 2101 gatcaagtgt ccagtatgca agcaaatcac ttcggttggt cctaaaggtg tgaaatcttt 2161 gacatgcgat tacattttaa ccaacatttt ggatttggcc accattgaat cggagcaatt 2221 gcattgtacc tcttgcaaga gcaaggagaa tgcaatttcc cgttgcaatg attgtgccaa 2281 tttcttgtgc agtggctgcg ataatgccca caagtatatg cgatgctttg agaatcacga 2341 agtcgtcaag ttggaagatt tgcaaaaaac ttcggatggc gataagccat tgattatcca 2401 taagccattg tattgcaatg tgcacacatc agagaatctc aagtattatt gttttaattg 2461 ccaaataccg gtgtgtaatg actgtttgat agctgatcac aagggtagtg aacatcacta 2521 tgatatcata gcgttggccg agaaatccgt gcgaggtgac gttgagaatc ttatgaagga 2581 ggccaaatcg aaggtgcaat attgcgacga agcagacgca aatttatcta gcgctcttac 2641 cgagttacaa actcaacatg attcagcacg cgatctcatc caagagacct ttgaaaacta 2701 caagaaggtt atagaaaagt gtcgcgatca agccttggtg gaactaaaga aactgcattc 2761 tgaaagagtt ttgaaaatta tggatttaat gcaaaatatt cagaacacca tgtgtaaaat 2821 cgataacaca tgcaaattta ccaatcgcgt attggagcag gcaaacgcag ctgaatttct 2881 atcaatgaag aagttgattg catctcaatt tattaacatg attaatacaa caccgaaatg 2941 tgatattaac tattcgctaa cgtttgatac gaagccggat aagtttgaac aattggccca 3001 ggatactttt ggaaagttcc gcacagaatc tactccgcca tcgccaaaag aaagtacccc 3061 accaccaact ttgcctggaa tgcctccgaa tatgattaac ggccgcgtcg gcggttcatg 3121 cagtggcgga agcggtggtg caatgaattg ttccaatagc tctcagagtc agatggccag 3181 ctcagtaacg gccagcagcc caatttcttt gccaacttcc atgcaaagtt cctttgatgg 3241 tgacatctat gctttgggca atggtttcat gatgtctaac gtacttaccc cagattctcc 3301 tccgcaaggt caatctgtat taccaccaca tcaccatcaa ttgcaacatc agaacagcac 3361 ttcttcccac cacagcagtg ttagtggctt taatggcatt ggttccatcg catccggcaa 3421 tggcaacaac ttaaataaca acatgaataa tacatcacct gcattcaatg gatctcttgg 3481 taacacacca ctcggttcgg gcccaaatgg ctcactaatg ggtaacaacg gccttaacgg 3541 tctcaacaac tctggacccc cggcgggcat gaatgccttg aataatcctc ttaataacag 3601 tcttactgct gctctgaacg gtcctttggg cggaaatgcc ggcgttgctg ctgtaccacc 3661 accaggtggc tttaatagca ttctcgaata caatttatct cgtcttgcca gtcttactga 3721 aaacacacca gacaccctta atgaccctct agtaggctcg cccagtggac ccaccaatca 3781 atcagttgtt ccagctgcta atgcacaaaa tcagccaatc actctggccg acattttgtc 3841 cggtgatcaa agagctttca acaatttaca agctcttgct aaattggggc taaacaataa 3901 tgattactgc ctatccacag caccatcacc aagcttgcca aatttgccac cattgtgccc 3961 tggtggtggg gcaggtggtt cggttgatga tatgagcata gctagtttcc atgccccgca 4021 acaagcgcaa ccaactacga cgagcattat tacgggccga aataaggcaa caccaatgca 4081 aattcgttgc aagtttggtt ctttaggtac atcgaagggc cagttcaatt ctccgcatgg 4141 cttttgcttg ggcgtcgatg aggaaatcat tgtggccgat acgaacaatc atcgcattga 4201 aatttttgac aagtcgggta atttgaaatt ttacttcgga gtacctggta aggaagaagg 4261 tcaattgtgg tatccgcgca aagttgctgt tatgcacaca aacggcaaat ttgttgtctg 4321 tgatcgtggc aacgaacgtt cacgcatgca gatcttctca aaaagtggcc attttatgcg 4381 caaaattgcc atacgataca ttgatattgt tgctggtctg gcagttacat cgaaaggaca 4441 tatcgttgcc gttgacagtg tttcccctac tgtgtttgtt atatcggaag atggtgaatt 4501 ggtgcgttgg ttcgattgca gcgattacat gcgcgaacca tccgacattg ccattagaga 4561 caacgacttt tacgtttgtg actttaaggg tcactgcgtt gccgtctttc acgaggatgg 4621 cacattccaa tatcgtatag gcaatgagaa ggttacatgc ttccccaatg gaatcgatat 4681 atcaaatgct ggagatatat taatcggaga ttcccatggt aatcgcttcc atgttgcttg 4741 ctattcgcgt gatggtgttc ttcaatcgga gtttgaatgt ccacatgtca aggtatcccg 4801 ttgctgtggt cttaaaataa catcggaggg ttatgttgtg acattggcca agaataacca 4861 tcatgtttta gtgctcaata cactatatgt tcagtgattg caaaaaaaga aatctctcaa 4921 tgcgagactt gatttattac cgtatggaaa aactacaaca gttagcaaat ctcaccaaac 4981 acaccaacaa caacaacaaa cgcaatcgca tcttcaacaa cagcagcagc agcagcacca 5041 acaccatcat catcaatcgt tgcgtgctac agtttttcca gcaatgaatg gcagtcattg 5101 tgcaaacact ccaataacgg tagctgctac agctgcagcc aattcaatcg gagcaacatc 5161 aggcacagcc gcagtagtaa caccaacagc atcatcatca gcaacagcag cagcagcaag 5221 tacatctgta aacttcaatt tgcctttgat tagcaagcat cagctttata aaactaatac 5281 tgaaaatagt gataatggtg aacaaacaaa attacaactt atagattatg atgaaattta 5341 aggcaataat atttttgtat tattttcttt gaaaaaacag aaaaagcaaa aaaaaaaaaa 5401 aacatatttt taacatgatg atgataacaa cgcctccaaa gatacgacga aattttgaat 5461 ttacgccgcc aaaagccaaa aagaaaaaaa aacgtaaaaa caaaacaatt tatttttttt 5521 acacctcttc ttactacata ctactacttt attataaatt attatattct acatcgtttt 5581 acactttaca atttttaatg tagttaaaca attacaaaaa aagaaggccg tttttatata 5641 caaaacaaat atttttagct tttatgaaga gatttttttt tataatttaa tttgtttctt 5701 tccttctgtg tatattactt aaaaaaaaac aaacaaacaa aacaaaaaag attttacagt 5761 agaatttaaa gttgcatatt tccatatacg ccaaaaaaat ttatgatatt tttcttgtat 5821 acggaaaggt tgccctttta gattcgacga tattaattat gagatggaac ggaacacaca 5881 cagacacata cacatataca taattgccac aagacatctg aaagaaagaa agaaaaaaaa 5941 acacatgttc ttttcgaaac aaatctcaag cccttacaaa tacaattata atattttgat 6001 ctctttctat tcaatttttt ttatttaata tccaaacatc attattttat ttcatagaac 6061 aatttgaaat tttgagaaaa attaaatact tttttttttc ttttttaaat ttgcctttgt 6121 aaagaacgaa aacttaaaac aaaatattaa atatttttta ttttttcaaa aacgctgcaa 6181 tggtttacaa taaactgaac acaattcttg caaaagaata atagcaaaca agaatcaact 6241 taataaatat tgttatttaa tttttttaca tttttttttg ttacgttttc cttttttatg 6301 ataatttaaa atcaaaagaa aaatgtattt actttgatga aaactattta catacataca 6361 taccgctgtt ttcatgaaga aatgtatgtt aatttttatt ttagccaaca cattatattc 6421 ctttttttta attaattaat acatacttat aaaataataa tttccccacg ttatttttta 6481 aataaggctg gttttccaag acattatttt tatttactca ctcacttgtg tgttatctat 6541 atacatataa tatatataca tatattttat ttttaattaa aaataaaaaa aaacattgtt 6601 aactttttaa attattaatt aactacacat ctacaaacta tttacataaa aaaaaacaaa 6661 caaaaaacga agaaaaaaaa aaaacaaaaa tatttaaaca tgttttaata atgttaaata 6721 ttttaacaca acaaaacaac aacaaatttt aaacgtgaaa caaagaaaac ccttataatt 6781 tataatacaa taccatatat atatatatac ataaaatgtt taattttatt ttaacttacg 6841 tgtttcaaat attttcttgt cattttgtat tttttttttt aattttttat atttatttaa 6901 tttttgtttc aaccaagaaa aaatatacat atagatatac atatatgatt ttcaaatgta 6961 tttataaaat ttcctttttt cgttttgtaa acattataat acattttttt tgttctacta 7021 atgctaataa attaaaacga acgaaaacaa agaaaattga actagcttaa agaaacaaaa 7081 caaaacaaaa aaaaaaaaac atattttgtg cgcgaggctg tagtttttaa ttgatgaaaa 7141 gcaaaagaag agaaaaagga ataagaaaaa caaaaacaaa acacaaaata aaaatcaata 7201 ccaatcatac ctttttacta ctatataagc attaacaacg attacaagaa ttacccaaaa 7261 gcaatccttt ttaagaaaaa tacatacaaa catggcatac atatataatt ttaagtagta 7321 ccaaatgtag cgtttctctt cgaaatttta aacaacacat acacacacac agaaacatca 7381 gacttataaa attttgaaac cgtcgcgtcg tcattatttt cgtatagact aagattagtt 7441 tgcttttgtg ttgttataac ctatagtttt tatttattat aaaatacttt ttattatgtc 7501 atatgtaatt ttgtctttaa caaaagagca aagtggttag ttagtctctc tctctttctc 7561 atcaaaaaaa aaaggcaaat tttcatgtac atttgtaatg tttggctgtt caaagatgta 7621 gtgttttttt attattatta taattatctt tatttttaaa cttagtcatg aattttttag 7681 ggatttttat tttaat