Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Stomoxys calcitrans calcitonin gene-related peptide type


LOCUS       XM_059366413            2639 bp    mRNA    linear   INV 02-SEP-2023
            1 receptor (LOC106083463), transcript variant X8, mRNA.
ACCESSION   XM_059366413
VERSION     XM_059366413.1
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2639
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..2639
                     /gene="LOC106083463"
                     /note="calcitonin gene-related peptide type 1 receptor;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 12 Proteins"
                     /db_xref="GeneID:106083463"
     CDS             680..2173
                     /gene="LOC106083463"
                     /codon_start=1
                     /product="calcitonin gene-related peptide type 1 receptor
                     isoform X2"
                     /protein_id="XP_059222396.1"
                     /db_xref="GeneID:106083463"
                     /translation="MELLLNQLSRSKRDANLKEFLTHLFVDCMVKYKNESWFRNQSAQ
                     STEFPTSIPRYVEDAVLNQGSINLENVNIAEEERNELYATISAATLSPNSITSFTEAV
                     EDAFTTNGMSTTGQYSSTASTPTEEVAFCPLRFDGYLCWPRTPAGTVLSQYCPDFVEG
                     FNSKFLAHKTCLENGTWYHHPESLQEWSNYTNCIDYEDLEFRTFVNELYVKGYAVSAV
                     ALILSLIIFLGFKSLRCTRIRIHVHLFASLAFTCITWILWYKFVVEEPETIRDNTYWC
                     ISLHLLIHYFMLVNYFWMFCEGMHLHLVLVVVFVKDTVVMRWFKIFSWLSPLIFVTAY
                     GVARYFHPEDNTHCWMKDSFLLWIFSVPVCVSLVSSFFFLVNVLRVIVRKLHPQSAQP
                     APLAIRKAVRATIILVPLFGLQHFLLPYRPDTGTPLERFYQLLSVILVSLQGFVVSFL
                     FCFANHDVTFAVRSLLNRLMPSLVSPPPPTSSTGQVATTTPSRELGV"
     polyA_site      2639
                     /gene="LOC106083463"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 actaacgact acagcatacg gaaaagtatt caattgcaaa atgttttatc taagatttct
       61 tttcttcgta atactgttga cagttttcaa tgtgtgtgta aagtgtgata tttcgattac
      121 cggctaacaa aaaattcaaa ttagtggaag actaaaggaa acggaaatgt tgtgaatagc
      181 atctgcatta ggacattaat taagtgaata actaaataaa tgatagtaat gagttctcaa
      241 agcgagtgaa taagtaaatg acggtgaaaa taaatcttca agagtttata agctgaggga
      301 aactaaataa aatcttaact agctattaag agaataccga tattcgatgt aaaagtttgc
      361 ccctgttcat ggacaagttt gatattcgat atatgaggtg gcataaaact agaggaaagt
      421 ctacatgaag aatgaaaaaa aaatattagc agcttgaatt ggcaaaacga ttccacagcc
      481 tgaagttcga ttcaaaaagc cacaacttca attgaccagt gtaatattta attgcttcct
      541 gaaatacaaa aggattattt aagcctcata gcttttgacg agttatgaca atcttgtgga
      601 ttttttcgtt tctaaattaa tgacaatgat ttaaactcaa tattgtggga gataaaggtt
      661 aaataaatac aacaaaaaca tggagctgtt actaaatcaa cttagtcgga gtaaacggga
      721 tgccaatcta aaggaatttc taacacatct atttgtggat tgcatggtga agtataaaaa
      781 cgaatcatgg tttcgaaatc aatcggcaca aagtactgaa ttccccacct ccataccacg
      841 ctatgtagaa gatgctgttc tgaatcaggg ctcaattaat ttagaaaatg tcaatattgc
      901 cgaagaggaa cgcaatgagt tgtacgccac cataagtgct gccactcttt cgcctaattc
      961 aattacttca tttacggagg ccgtggaaga tgcattcaca accaatggca tgtcaacaac
     1021 cggccaatac tcatcaacag cttccacccc aacagaggag gtggcattct gtcccttgcg
     1081 ctttgatggc tacctgtgtt ggccacgcac cccagctggc actgtactca gtcagtattg
     1141 tccagacttt gtggagggat ttaatagtaa atttttggcc cacaaaactt gcctagaaaa
     1201 tggcacatgg tatcatcatc ccgagagctt acaagagtgg tccaactata caaattgcat
     1261 tgactatgaa gatttggagt ttcgaacatt tgttaatgaa ttgtatgtga aaggctatgc
     1321 agtgtccgct gtggcattaa ttctctccct tataatattt ttgggtttta aatccttgcg
     1381 ttgcaccagg attcgcattc atgttcattt attcgcctct ttggcattta cttgcatcac
     1441 ttggatcttg tggtataaat ttgttgttga ggagccagaa acaatacgag acaatacgta
     1501 ttggtgtatc tccttgcatt tgctaattca ttacttcatg ttggtcaact acttttggat
     1561 gttctgcgag ggaatgcatt tacatttggt gttagtggtg gtatttgtca aggacacagt
     1621 tgttatgcgt tggttcaaaa tcttttcctg gttgtctcct ctgatctttg tgacggcgta
     1681 tggggtggct aggtattttc atcccgaaga taacacacac tgctggatga aggatagctt
     1741 ccttttgtgg atattctcag tgccggtgtg tgtgtccttg gtttcaagtt tctttttcct
     1801 ggtgaacgta ttgcgtgtga ttgttcgcaa actgcatcca caatcggcac aaccagctcc
     1861 tttggccata cgcaaggccg tacgagccac gattattttg gttcccttgt ttggattgca
     1921 gcattttctg ctaccctatc gtccagacac tggcactccc ttggaacgtt tctatcaatt
     1981 gttgtcggtt atattggtaa gccttcaagg atttgtggtt tcgtttcttt tctgttttgc
     2041 caaccatgat gtgacttttg cggtgagaag tctattgaat cgtttgatgc ccagtttggt
     2101 ttctccacca ccaccaacaa gtagtacagg tcaggtggcc acaacaacac ccagccgtga
     2161 gttaggagtc taagcgacag aggaaatgag tgagcaaacg gtagcttaac caaaccgccc
     2221 aaatgtcaag gaacagtcca catcataatc actctttgac aaattactat attgaaatgt
     2281 caaccataat cccaaccgaa tgatcttcca ggaccaacct ttttctttta gttttgtatt
     2341 tattagataa ctatccttct tcaagggtta ttttagccgt ttggcaattt cttctcaaaa
     2401 tgaatctttt gtacattttg taatacatac atgttgaatt gtactcacaa aatccttaac
     2461 ccatacactt gtagtaccat ggacaagaat catatataaa cttgtataag aatgtatatc
     2521 tcacaaataa taatgaataa aatatcatat gtaactgaca gtggtttcca caataaatgt
     2581 aacaaataca atacacggaa tggaaaatta tatataaaac gtttaagcac atgagaaaa