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LOCUS XM_059366407 5861 bp mRNA linear INV 02-SEP-2023 transcript variant X18, mRNA. ACCESSION XM_059366407 VERSION XM_059366407.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5861 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5861 /gene="LOC106083366" /note="homeobox protein cut; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106083366" CDS 2439..5180 /gene="LOC106083366" /codon_start=1 /product="uncharacterized protein LOC106083366 isoform X4" /protein_id="XP_059222390.1" /db_xref="GeneID:106083366" /translation="MFIPDSLRSCMIETDVNSYLQTSSSGQVLNLYVDEFHPFIEALL PYVKSFSYSWFNLQAAKRKYYKKHEKRMSLEEERHCKDELQNEKAEVKQKWASRLLGK LRKDITQECREDFVQSITGKRKSICVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVIL FKAIPLESTDGERLEKSPECIHPALCVNPYHINVSVRELDLYLANFINTHDPLSSPTP TTPPPGTPSTPSLMLYSNEHNASTNNNNTNSSDNKKHIEEERKNKDVDNTPFAGYSHN PYNGVVCNDIILATGVFSSKELWKLSKASILEETANDLIQASSIKLEHPAAAYECNTY QMSASGAPLGSVVGGVNSAGMVTASDGRASVSASMVLPSGYSIDFVDPRSSMHLSNSS LLRASSATTCKSDPNGSPQDGSSFSVILRQNEDNGSNGGAAASNNADDPALQRYTPTS NRVLLSMGQMRPGEVLMQHNVSSSLVPNSVSPALYYPQQNSPNSNANEAAEEAHHQQH HHQQQQHHQHHHHQHQLHQASATPKYATELVNHGQDMSEFVAYVCQDTGGIHAANAGD PSDLHVHHHQTSSHFQLQHAAAAAAVGRGPKISAVSAAAAAAHYQQYSTMLPPPPLPP MARPVAIIRSTGDLTMVASPPSSAAISPPPLTSVSSAGDSPRHHHQSLQHHHPSSHHH HHHHHHGHQQQQQQHHQAQQQHTTIDHTSNSSSGLSSMTSKLTNTTASTSSAQESTTS TITVGSNNNSSDLVVASTASASPPPAPTQSPHAHIIDVARCKTSPTSSAAAAVAVSTP TSALTRISAQPYPNTNGREYFNHFHTQTTPLLGYTTMSGVISPTNLSLYSSTTGVTSH RTTPRSRWNSSFLSMEDDFNMMSHTLTSTNPEATPVILMEDSGRYSDEYVTSRDYVT" ORIGIN 1 acgacataga atttgagcag agcgccatac ggtaaagcca atagtgacag caaaacagcc 61 aacaagcaag agcccatcat aacacattaa atggtgagtg aggaaaaacg tttcgtcttg 121 tcttgtctgg tctggctctg gtctggtatc gtacgtttcg tttgctcaga ctaaaagggg 181 aaaatgtgaa aactgcttaa acggaaaaat aaaaaaaaaa taattataaa aaaacaaaaa 241 aaaaattaaa agcctttatt tattaagtgg agtaacagaa ggaggtggtg aaaagtttaa 301 aacagaattg tagtttttcc tgtgtaacat gcttaaaaga aaattgaaga aaaatcaaaa 361 ataaaaatga tgtttggtag tttaacaaac taaatcaatt atttttttgt ttaacgaaaa 421 agtgaaagtt atgatttttc taatattaag aaattgaaaa aaagtattat gaaaaagttt 481 acttaaaact cacagccaca tagaaatgtc tcgttaaaat acatatgtgt ggctaggtat 541 ggcatataca tatgtacgcc acacacatgc acactctcac ctagccatgc acagtatagg 601 ccaaaaagtt atttttatat aatgtagagg aaacgaaaac attgccgaga aaaatactca 661 ctcattcact cgctcactca ctaggctgct cgctcgcatg tcaaaggcga aaaacgtacg 721 gaacgggaaa aaaatcacaa aacgaaaaca aaaataagtc gcacacgatt cgaaaaaaat 781 aaaacaaaaa caaaaacaac aagaagcaga acgaattttc ttttttcctt ctttttctga 841 gtgctcgact gcctgcttgc ctgcctgcct gtcgtcgtct gtctgtctgt cgtctcttct 901 tttgcgtttg aacaaaaaaa ttgtgtaaca aaaattcaaa ataaattttt tcaccaaaac 961 ccatatccct ttcaacgaat tttaaaacga aaaaaatcca ctgtaaaagg aaaatttgtg 1021 caaaaaaggg cttcttagcc aggaaatgtg aaatgtgaaa agcaaatgga gttgacagtg 1081 attggcaaat gtcggtgcaa gaaatcgata atgggcaaag caagcggccc aaccaagttt 1141 gttcttctaa aaagcctaca taaataaaca aagaaaattt ataaaaaaaa aaaataagaa 1201 aataaacaaa aacgtcaacg gcaataataa tatagaaatt gttttggtta attatttttg 1261 gtttatcact caacgtcatt tagtgagtcc tcgtcacgat tgtgtgattt attttcccta 1321 aaaaatctct gtttaattta aaaatcagac aatagcaaca ataaaacaac tgtatgcaca 1381 aaaataaatt ttaatttttt ataaaaaaat gtaagcaaca gcaaaaaaag acaataagaa 1441 atttggaaat aaaaagaaac aacaacaact aaaataaaat aatagcaaat agcaaaatgt 1501 tcgatatccg ttgagttcct ataacaaatg gctgataaac aacaacgaca acaacatacc 1561 acaacataaa taaaataaca actacagcac gtacaaccaa caacatctct ctctctctct 1621 ctctctctgt ctctctcgct caacacactc tcatagcaac accaaaaaaa tcaaatcaac 1681 aaaagaaaac tctgcaaagc aaaataaata aataaaacaa caactacaaa agcagtctct 1741 ctgacaacaa caaaagaaaa agcagccgca tccataggcc accagacaat gataatgtcg 1801 ttgataatgt tgccacctgc cacctttaaa gatactgtct acaaaacatt gccaatgttg 1861 ttacgagcct aaagggatat cctcaaaaaa aaaaacaaac agcagcgcag cagttgtcat 1921 ctgtctactt cgacttcttc gtcttcttct ttctttatct ttcccatatt cagtctttcg 1981 cacaaaccat acactctcgc tcacttctat gccaaaggca aggctgataa acaaatgttg 2041 gtgggattta atattttcaa cagaaatttt cttactctgc tttaaaagac ttcttcgcat 2101 ctcaatctct tatcctgttt tatggacaga tttcctgttg gcccaacatt gcgtgcggtt 2161 gtgttgaccc aatttcatca cttcaactag acacagccat ccaagacatg aaaagaaaag 2221 ctcaaattca aaaataaaac caaaggtctt ccaagtataa caaaaactag aaacaacatc 2281 ctgtaaaact caataaaaaa aaaacaaaaa caacaaaaaa ccaaggcaaa ccacaacgac 2341 taacaacaat tgcaaaaggc aaacagagaa acaccattct catcaataat aacaacaacg 2401 aacaacggag taacatacaa aagccttttt cacaaggcat gtttatacct gattcactgc 2461 gtagctgtat gatcgagacg gacgttaact cttatctgca aacatcatcc tcaggacagg 2521 tgctgaactt atacgtggat gagtttcatc cgttcattga agccctgttg ccatatgtca 2581 aatcattttc gtactcgtgg ttcaacttac aagcagccaa gcgtaaatac tacaagaaac 2641 atgagaaacg catgtcattg gaggaggagc gacattgcaa ggatgaacta cagaacgaaa 2701 aggctgaggt taaacagaaa tgggcttccc gtttgctggg aaaattacgc aaagacataa 2761 cccaagaatg ccgcgaagac tttgtacagt ccataacggg caaacgcaaa tcgatatgtg 2821 ttctctccaa tcccgatcag aaaggcaaaa tgcgtcgcat cgattgtttg cggcaggcgg 2881 acaaggtttg gcggctcgat ctagtcatgg tcatactctt caaggccata cctttggaga 2941 gcaccgatgg cgaacgtctg gaaaaatctc ccgaatgcat acacccggct ttgtgtgtca 3001 atccctatca catcaatgtc tcagtgcgtg aactcgattt gtatttggcc aatttcatca 3061 atacccacga tccattgagt agtcctacgc ccacaacacc gcctccgggc acaccctcaa 3121 cgccttcgct catgctctat agcaatgagc ataatgccag caccaacaac aacaacacca 3181 atagctcaga caataagaaa cacatagaag aagagcgcaa gaacaaagac gtagacaaca 3241 caccatttgc aggctacagc cacaatccct acaatggtgt tgtgtgcaat gatataattt 3301 tggccactgg tgttttctct tccaaggagc tttggaagct gtcaaaagct tccatattgg 3361 aagaaaccgc caatgatctc atccaggcta gctcgatcaa attggagcat ccggcggctg 3421 cctatgagtg caatacatat caaatgtcag cctcaggagc tccactgggt tcggtggtgg 3481 gaggagttaa cagtgcgggt atggtgacag caagtgatgg cagggcctcg gttagtgctt 3541 ccatggtatt gccctcgggt tacagcattg actttgtgga tccacgcagc agcatgcatc 3601 tctcaaactc ctctctgctg agggcctctt cggctaccac ctgcaaaagt gatcccaatg 3661 gctcgccaca ggatggcagc agtttctctg tgatattgag gcaaaatgaa gacaatggca 3721 gcaatggcgg agccgctgcc agcaataatg ccgatgatcc tgctctacag aggtacacgc 3781 ccaccagcaa tagagtgttg ttgagtatgg ggcaaatgag gccaggagaa gtgcttatgc 3841 aacacaatgt cagctcttcc ttggtgccaa actcggttag ccctgctttg tattatcccc 3901 agcagaacag tcccaactcc aatgctaatg aggccgccga agaagcccat catcagcaac 3961 accatcatca gcagcaacaa caccaccagc atcatcatca tcaacatcaa ctgcatcagg 4021 catccgctac acccaaatat gccaccgagt tggtcaacca cggtcaggat atgtcggaat 4081 ttgtggctta tgtctgccag gatactgggg gtatacatgc cgccaatgcg ggcgatcctt 4141 ccgacttaca tgtgcatcat caccaaacgt cttcccattt tcaattgcag catgctgctg 4201 ccgccgctgc tgtgggtcgg ggtcccaaga tttcagcagt ctcggctgcc gcagctgcgg 4261 cacattacca gcaatacagc accatgttgc caccaccacc gctaccgcct atggcccggc 4321 cggtggccat aatacgttcg acgggggatt taaccatggt ggcgtcacca ccctcatctg 4381 ccgccatatc accgccccct ctgacgagtg tatcctcggc tggtgattcg ccacgacatc 4441 atcaccagag tttgcagcat catcatcctt cctcacatca tcatcatcac caccatcatc 4501 atggacatca gcagcagcaa cagcaacatc atcaggcaca gcagcaacac accactatcg 4561 atcacacctc gaattccagc agtggcctaa gctcaatgac ttcgaaacta accaacacaa 4621 ccgcctccac cagttccgcc caagagtcta caaccagcac cataactgtg ggcagcaata 4681 ataattcttc cgatttggtg gtggcctcta cagcgtcggc atcaccgcct ccagcaccca 4741 cacaatcgcc gcatgcacac atcatagatg tggcaagatg taagacatcg cccacttcat 4801 cggcggcggc agcagttgcg gtgtccacac ccacatcggc gttgacgcgt atatcggccc 4861 aaccgtatcc caatacgaat gggcgtgaat actttaatca tttccataca caaaccacac 4921 cgctcttggg ttataccacc atgtcggggg tcatcagtcc tacaaatctt agcctctatt 4981 catctacaac gggtgttaca tcgcatcgca ccacccccag gtcacgctgg aattcctctt 5041 ttctttccat ggaagatgat ttcaacatga tgtcccacac actgacaagc acaaatccag 5101 aagccactcc agtcatactt atggaagatt ctggtcgtta cagtgatgaa tatgtcacaa 5161 gtcgtgatta tgttacatga ttataaatgc atcaatcgtt ttatatgccc tactagaact 5221 gcaatcacag caacagacag caacaataat aacaaacaaa ccaaaactgt aagaaataat 5281 aacactacta ttctatacat acatatatat atatacatac atctattcta tactgtaact 5341 atagatacaa ctagaatatt tatatataaa aaaattatta ttattattta ttatttttat 5401 ataattaaga gaagagagaa aaaacaaaaa cacttgtttt aggaaattta tttgcaagca 5461 aacatgttga aatgtttgag aggaaatatt atatacacat atatagctca aggcaaatcc 5521 ctaagcagtt atagatcatg aaaaaagtcg gagttcgagg caattggata caccaatgaa 5581 gagaaagtat aaagttcaaa tgaaaattca atttgaagct aagatttcat tgtttttggt 5641 attgttttta tttaatgctt gaagaagata atatagctca aggtcttagc tgtttttaac 5701 aatttgaatc tatttcctaa gttaattaaa tcaaaagttt tagggaaaaa actgatttat 5761 taacaaaatt tatataaatc atacgcaacc tgggcaaaaa atcagttttt aattaatatc 5821 ttattttaaa cggatttttg tatggttttt ctttgtttta t