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LOCUS XM_059366388 6488 bp mRNA linear INV 02-SEP-2023 transcript variant X3, mRNA. ACCESSION XM_059366388 VERSION XM_059366388.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6488 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..6488 /gene="LOC106085133" /note="clathrin heavy chain; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins" /db_xref="GeneID:106085133" CDS 276..5318 /gene="LOC106085133" /codon_start=1 /product="clathrin heavy chain isoform X1" /protein_id="XP_059222371.1" /db_xref="GeneID:106085133" /translation="MTQILPIRFQEHLQLTNVGININSISFSTLTMESDKFICVREKV NDTAQVVIIDMNDTNNPTRRPISADSAIMNPASKVIALKAQKTLQIFNIEMKSKMKAH TMTEDVVFWKWISLNTLALVTETSVYHWSMEGDSTPHKMFDRHSSLNGCQIINYRCNP NQQWLLLVGISALPNRVAGAMQLYSVERKVSQAIEGHAAAFASFKMEGNKEPSTLFCF AVRTATGGKLHIIEVGSPPTGNQPFVKKSVDVFFPPEAQSDFPVAMQVSSKYDTIYLI TKYGYIHLYDMETGTCIYMNRISADTIFVTAPHESSGGIIGVNRKGQVLSVTVDEEQI IPYINTVLQNPDLALRMAVRNNLSGAEELFVRKFNKLFTAGQYAEAAKVAALAPKGIL RTPQTIQRFQQVQTPAGSTTPPLLQYFGILLDQGKLNKYESLELCRPVLLQGKKQLCE KWLKEEKLECSEELGDLVKTSDLTLALSIYLRANVPNKVIQCFAETGQFQKIVLYAKK VNYTPDYIFLLRSVMRTNPEQGSGFASMLVAEEEHLADINQIVDIFMEHSMVQQCTAF LLDALKHNRPNEGALQTRLLEMNLISAPQVADAILGNAMFTHYDRAHIAQLCEKAGLL QRALEHYTDLYDIKRAVVHTHLLNADWLVGFFGTLSVEDSLECLKAMLTANIRQNLQI CVQIATKYHEQLTTKALIDLFESFKSYEGLFYFLGSIVNYSQDPEVHFKYIQAACKTN QIKEVERICRESNCYNAERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQ KYIEIYVQKVNPSRLPVVVGGLLDVDCSEDIIKNLILVVKGQFSTDELVEEVEKRNRL KLLLPWLESRVHEGCIEPATHNALAKIYIDSNNNPERFLKENQYYDSRVVGRYCEKRD PHLACVAYERGQCDRELIAVCNENSLFKSEARYLVRRRDAELWAEVLAESNPYKRQLI DQVVQTALSETQDPEDISVTVKAFMTADLPNELIELLEKIILDSSVFSDHRNLQNLLI LTAIKADRTRVMDYINRLDNYDAPDIANIAISNKLYEEAFAIFKKFDVNTSAIQVLIE QVNNLERAYEFAERCNEPAVWSQLAKAQLDKGLVKEAIDSYIKADDPSAYMDVVSVAS QSDSWEDLVRYLQMARKKARESYIESELIYAYARTGRLADLEEFISGPNHADIQKIGD RCFNDGMYDAAKLLYNNVSNFARLAITLVYLKEFQGAVDSARKANSTRTWKEVCFACV DAEEFRLAQMCGLHIVVHADELEDLINYYQDRGYFEELIALLESALGLERAHMGMFTE LAILYSKFKPSKMREHLELFWSRVNIPKVLRAAESAHLWSELVFLYDKYEEYDNAVLA MMAHPTEAWREGHFKDIITKVANIELYYKAIQFYLDYKPLLLNDILLVLAPRMDHTRA VSFFGKTGHLALVKPYLRSVQSLNNKAINEALNGLLIEEEDYQGLRNSIDGFDNFDTI ALAQKLEKHELTEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMEYAAESGKQEIAE ELLAWFLERNAFDCFAACLFQCYDLLRPDVIMELAWKHDISDFAMPYMIQVVREYCAK VDKLEQNEARREKEDETVEHKNIITMEPQLMITAGPAMGMPPQYAQNYAAAGQAPGYA PNMAYPGYGIYK" ORIGIN 1 cttttcacag aagcgggcct tgcagagatt aaatttagtt tagtgaaatc agtgtattgc 61 tatttgaaaa atgtctcata aaaatattta aacaataagt taaactggtt tttgttgttg 121 catttttgaa aacgtcatct ccccaaatct gaaaggcaaa cgacgagaca tagtaaaaac 181 gacaacaata aaacaataat tgtgtgttcg agtaacataa aaaagaagca ggagaagcag 241 cagcagcgaa agattgcagg aagaaagtgc acaaaatgac tcaaatatta cctatacgct 301 ttcaggagca tttacagctc acaaatgtcg gtattaatat caattcgata tcgttcagca 361 ctctcaccat ggagtcggac aaattcattt gtgtgcgtga aaaggtcaat gataccgcac 421 aagtggtcat tatcgatatg aatgacacca acaatccgac tagacgtcca atttcagccg 481 attcggccat catgaatcca gctagcaaag tcattgcact taaagcgcaa aaaactttgc 541 aaatattcaa catcgaaatg aaatcaaaaa tgaaggccca taccatgacc gaagacgtgg 601 tcttttggaa gtggatatcc ttgaatacat tggccttggt caccgagacg tctgtttatc 661 attggtccat ggagggtgat tcgactccac ataaaatgtt cgatagacat tcctccctaa 721 atggttgtca aatcatcaat tatcgttgca accctaatca gcagtggctt ttgttggttg 781 gcatttcggc gttgccaaat cgtgtggctg gtgccatgca attgtattcg gttgagcgta 841 aagtatcaca ggctattgaa ggtcatgccg ccgcttttgc ttcgttcaaa atggagggca 901 ataaggagcc ttcaactttg ttctgttttg ccgtgcgcac tgctaccggt ggcaaattgc 961 acatcattga agtgggttct ccgccaactg gtaatcaacc gtttgttaag aaatcggtgg 1021 atgtcttctt tccacccgag gcacagagtg attttccggt agcaatgcag gtttcctcta 1081 aatatgatac catctatttg atcaccaaat atggttatat tcatctttat gacatggaga 1141 ctggcacctg catttacatg aatcgcatat cggccgatac aattttcgtt actgcaccac 1201 atgagtcaag cggtggcatt attggtgtca atcgtaaggg tcaagttttg tccgtaactg 1261 tggatgagga gcagataata ccctacatca atacggtatt gcagaatcct gatttggctt 1321 tacgcatggc agtgcgcaat aatctgtcgg gtgctgaaga gctttttgtg cgtaaattca 1381 ataaactttt taccgccggc caatatgccg aggctgctaa agtggccgct ttggccccca 1441 agggtatttt gagaacgcca cagaccatac aacgtttcca acaggttcaa acacctgccg 1501 gttcgaccac accaccattg ttgcagtact ttggtatttt gctggatcag ggaaagctga 1561 acaaatacga atcgctggaa ttatgccgcc cagtattgtt gcaaggcaag aaacagcttt 1621 gcgagaaatg gcttaaggag gagaagttgg aatgcagcga ggagttgggt gatttggtca 1681 agacatctga tctcacattg gccttgtcca tctatctgag ggccaatgtt cccaacaaag 1741 ttatacagtg ctttgccgag actggtcaat tccagaaaat agtattatat gccaagaagg 1801 tgaactatac ccccgattac atattccttt tgcgttcggt tatgcgcacc aatcccgaac 1861 aaggttctgg tttcgcttca atgttggtgg ccgaggagga gcacttggct gacatcaatc 1921 aaattgtgga cattttcatg gaacactcta tggtgcaaca gtgcactgca ttcctcttgg 1981 atgctctcaa acacaaccgt cccaacgaag gtgccctaca gaccagactc ttggaaatga 2041 atttgatttc agctcctcaa gtggccgatg ccattttggg caacgccatg ttcacccatt 2101 acgatcgtgc gcacatcgcc caattgtgtg aaaaggccgg tttgttgcaa cgtgctttgg 2161 agcattacac cgatttgtat gacatcaagc gtgccgtggt ccatacacat cttttgaatg 2221 ccgattggct ggtgggcttc tttggcactc tatctgtaga ggattccctg gagtgtctaa 2281 aggccatgtt gactgctaat ataagacaaa atctacaaat ttgtgttcaa attgctacca 2341 aatatcatga acaattgacc accaaagctt tgattgactt gtttgaaagc tttaagtcct 2401 acgagggttt gttctatttc cttggttcta ttgttaatta ttcgcaagat cccgaggtgc 2461 acttcaaata catacaggct gcctgcaaga ccaaccagat caaggaagta gagagaatct 2521 gtcgcgaatc gaattgctac aatgcggagc gtgtaaagaa cttcttaaag gaggccaagt 2581 tgaccgatca attgcccttg attattgtct gcgatcgctt tgactttgtc catgatctgg 2641 tgttgtatct ttatcgcaac aatttacaga aatacattga gatttatgtg caaaaggtga 2701 atccctcacg tttacccgtt gtcgttggcg gcctcttgga tgttgactgc tcggaggata 2761 tcattaagaa tttgattttg gtcgttaagg gtcaattctc aaccgatgaa ttggtagaag 2821 aagttgagaa gcgtaatcgc ttgaaattgt tgttgccctg gttggaatct cgtgtccatg 2881 agggttgcat cgagcccgct acccacaatg ctttggccaa gatctacatt gattcgaaca 2941 acaaccctga gcgtttctta aaggagaacc agtactacga tagccgagtt gtcggtcgct 3001 actgcgagaa gcgcgatccc cacttggctt gtgtggccta tgaacgtggc caatgtgacc 3061 gcgaattgat agccgtgtgc aatgagaact ctttgttcaa gagcgaagct cgttatttgg 3121 tacgtagacg agatgcagaa ttgtgggctg aagtattggc cgaatccaat ccttacaaac 3181 gtcaacttat cgatcaagta gtgcaaactg ctctttcgga aactcaagat cctgaagaca 3241 tctccgtcac cgtaaaggct ttcatgacag ccgatttacc caacgaacta attgagttgt 3301 tggagaagat cattttggac tcttcagtat tctctgatca tcgcaatttg caaaacctct 3361 tgatcttgac tgccatcaag gccgatcgca cccgtgtcat ggactacatc aatcgtttgg 3421 acaactatga tgctcccgat atagccaaca ttgctatctc gaataaattg tacgaggagg 3481 cctttgccat tttcaagaaa ttcgatgtga atacttctgc cattcaggtt ttgattgaac 3541 aggtcaataa tctggaaagg gcctacgaat ttgccgaaag atgcaacgag cccgccgtgt 3601 ggtcacaatt ggccaaggct caactggaca agggattggt gaaagaagcc attgactcct 3661 acattaaggc cgatgaccca agcgcctaca tggatgttgt ttcagtagcc tcccaatctg 3721 attcctggga agatttggtg cgctatttgc aaatggcccg caagaaggcc cgcgagtcat 3781 acattgaaag tgaattgatt tatgcttatg cccgcactgg tcgtctagcc gatttggaag 3841 aattcatctc gggtcccaat catgccgaca ttcagaagat cggtgacaga tgtttcaacg 3901 atggcatgta cgatgccgcc aaattgttgt acaacaatgt cagcaacttt gcccgcttgg 3961 ccatcaccct ggtgtatctg aaggagttcc agggagctgt cgactctgcc cgcaaagcca 4021 actccacgcg cacttggaaa gaggtctgtt tcgcctgtgt cgatgccgag gaattccgtc 4081 tggcacaaat gtgcggtctc cacattgtgg tgcatgccga tgagctggaa gacttgatca 4141 actactacca ggatcgtggt tatttcgaag aattaatcgc tttactcgaa tctgctttgg 4201 gtttggaacg cgctcacatg ggtatgttca ccgaattggc tatactgtat tccaaattca 4261 agccatcgaa aatgcgcgaa catttggaat tgttctggtc acgtgtcaat atccccaagg 4321 ttttgagagc agccgaatcg gctcaccttt ggtccgagtt ggtattcctt tatgataaat 4381 acgaggagta cgataacgct gtattggcta tgatggctca tcccaccgaa gcctggcgtg 4441 aaggtcactt caaagatatt atcacaaagg ttgccaacat tgaattgtac tataaggcaa 4501 ttcaattcta tttggattac aaaccactcc tactcaatga tatcttgttg gtattggcac 4561 ctcgcatgga tcacacccgg gccgtttcat tctttggcaa aaccggtcac ttggccttgg 4621 tgaaacccta tctacgctct gtacaatcgc ttaacaataa ggccattaat gaggctttga 4681 atggtctact aatcgaagag gaagattatc aaggcttgcg caattccatc gatggttttg 4741 ataacttcga tacaattgca ttggcccaga aattggagaa acatgaatta actgaattta 4801 gacgcattgc tgcttatctc tacaaaggca acaaccgctg gaaacaatca gttgaattat 4861 gtaaaaagga tcgtttgtac aaggacgcta tggaatatgc cgccgaatct ggtaaacaag 4921 agattgccga agaactgctg gcttggttcc tcgaacgtaa tgcattcgat tgttttgccg 4981 cctgtttatt ccaatgttac gatttgttga gacccgatgt tatcatggaa ttagcatgga 5041 aacacgatat ttccgacttt gccatgcctt acatgattca agttgtgcgt gaatactgcg 5101 ccaaagtgga taaactcgaa caaaacgaag cgcgacgaga aaaagaagac gaaacagttg 5161 aacataaaaa catcattacc atggaacctc aattgatgat tacagctggt cctgcaatgg 5221 gtatgccacc acagtatgct caaaattatg cggctgctgg acaggcgcca ggctatgcgc 5281 ccaacatggc ttaccctggc tatggaatat acaaataatc acattaaatt ggggctgcac 5341 aaacacaaac ctattcccga tgaaaagcct tagaaaacaa aaaatagaag ctgatgaaaa 5401 tgattatctt ccaaaacaaa aacggagttc gaggcaatta agatcgttaa taccagtctt 5461 agtagttagc ctttttatta gcagcaacaa aagcaacata cccgtacatg aacaccttaa 5521 tcaattttca tcgtcatcat caacatcatc atggcccttg acagcagctt ctggtgtagt 5581 ttacagtatt ctctaaatat aactaaaggc gctattaaac ggcatgtaaa tgtcttatga 5641 catgtcattt tttgtatgca catgtagtgg aaaatgtttg tcaaaattgt caatttacat 5701 atgattcata atttttgcta tctcatctgt ctgttatttt cgtatgacat aacctaaaaa 5761 tgtgagcaaa atctgatttt tttatgccta aaaattgtta atcttgtgag aaagctggta 5821 aaatcataaa taatgtgaaa acaatttcag ttgggtttgc tttcattcga ctgacaacaa 5881 aaacagctga tttcttaaag tttctgtcag aaggaataga gcacgctcta atcgaaaaga 5941 attacatttg ctatttgata atttgacatg tcataagata attacacgcc gtgtaatcga 6001 gcctttacta catacaccta tatttattat tagcagatct ttcaaaacta attctcaaaa 6061 aacccaacag aaaaaaaaac aaatacttac ctacagttaa agttatataa agaaaatttt 6121 aaattgcgct aaatcgacac ataacttaaa agaatataca tagtattttt ccttgaaata 6181 agtaacggta acgcaaacat ttaacatgac ggaagagttt ttatcaccat acatacgaaa 6241 taacattttg aatttaaaaa tatgaattat agagtacata attaaataaa atatacatat 6301 atacctatat gttaaaacat atgttcaatg ttcataataa gcaagcacta ctatgcacaa 6361 taagatcgtc gtcgtagcaa aactacattc tcgatacatg aatgaagaac gaaacaataa 6421 gaagaaaaca tgtttatacg tttctttaaa tttataatta atttgaagta aaaaataact 6481 gtaattaa