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LOCUS XM_059366385 2211 bp mRNA linear INV 02-SEP-2023 (LOC106090557), transcript variant X2, mRNA. ACCESSION XM_059366385 VERSION XM_059366385.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2211 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2211 /gene="LOC106090557" /note="nuclear pore complex protein Nup88; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:106090557" CDS 213..2102 /gene="LOC106090557" /codon_start=1 /product="nuclear pore complex protein Nup88 isoform X2" /protein_id="XP_059222368.1" /db_xref="GeneID:106090557" /translation="MEMPRRWGANGQYMDGKSRITCRTSNLDGHFFTNNPHLELRQLR WHPASPTDSHLLALLSDNTIRVYDNSSLRHVWQVGPIPLKTDGNLNPSTVYALGESAV DFDVAPAVNVAEMQMNTTNTTINKDQTVLMNSTRLNQNTNKTIIMNETKANATKNQEK IEWPIVILRENGNIYVLMSGLDTERPRLQGPITITPSTVDNYGLDSCSILVIPSLPPT LVIAESNGKLHHALFLEAENAEDSFNEVDDSLNIHPSEWTVHVLETVELELGLPKDEV NQPFFCPIHLKRDYINELRYFAYHNTGLHVVTVNFIGELQRFLENEVDSDITTLSTPS HAEYIVCTKIDTGDNVNPVLGFVLLQMPACIVLLLGSGQVMTLKLVIDPKLLIDVQGT SKADMFPTENQDITQNQLSQVLGPSFVDHIKNMLKRSVTQPILSLDKNANPSPQECYE LLTQAVEVLRSQYLKRHELVRAEFAKRIHTIKLCREQQKQDIKDLEKERETIRDKAHK LAEKFEEISEQQEVLNKVCQDLMRQANTCLPNNTLAEKEFALEVERINKLTKNMNNSL QKCKESINKQCYHIAKYGENAKKKTFELPETQEKTIKEILLQMNAEIDGQIKEVKRIN KVVGI" polyA_site 2211 /gene="LOC106090557" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gctacattaa tccaggaaaa aaatgttgct ctctcaagtg tccatcagct attactggag 61 taaaagttat gggtcatgga taatacagaa cgttttgttt tcgtgtaaag accttggttc 121 cctcaatacc ctttagtttt gaagttgaac gcattgtggc ttccaatgag ggctctttgg 181 ttgccttggc tggcctaaaa ggtctttgca ttatggaaat gccaagacgc tggggtgcaa 241 atggccagta tatggatggc aaatcaagga tcacctgtcg tacctctaat ttggatggtc 301 acttctttac aaataatcca catttggaat tacgacaatt acgctggcat cctgcctcac 361 ccaccgactc tcatttgttg gctcttttgt cggacaatac cataagggtt tatgataatt 421 catcgttgcg ccatgtttgg caagtgggtc ccataccatt gaaaacggat gggaatctca 481 atccctccac tgtgtatgct ttgggtgaat ctgctgtgga ttttgatgtt gcaccagctg 541 taaatgtggc cgaaatgcaa atgaatacga ccaatacaac cataaacaag gatcaaacag 601 tgctaatgaa tagtacaaga cttaatcaga atacaaataa gaccataata atgaatgaaa 661 ctaaggctaa tgccaccaaa aaccaagaaa agattgaatg gcccatagtg atccttagag 721 agaatggcaa tatatatgta ttaatgtcag gcttggatac agaaagaccc cgtttacaag 781 gacccattac cataacaccc tctactgtgg ataattatgg cttagattct tgttccattt 841 tggtaatacc ctctttgcca cctacattag ttatagctga gtctaatggt aaacttcatc 901 acgctttgtt tttggaagct gaaaatgccg aagattcttt caatgaagtg gatgatagtc 961 ttaatataca tccctccgaa tggactgtcc atgtcttaga aactgtggaa ctggaattgg 1021 ggctacccaa agatgaagtt aatcaaccct tcttttgtcc catacatttg aaaagagatt 1081 acattaatga gctacgttat tttgcctatc acaataccgg tctgcatgtg gtcaccgtaa 1141 atttcatagg agaattacaa agatttttag aaaatgaagt cgattctgat atcaccacct 1201 tgtcgacacc ctcacatgct gagtacattg tctgcactaa aatcgataca ggagataatg 1261 taaatcctgt tctaggattt gttctcttgc aaatgcccgc ttgcattgtg ttgcttttag 1321 gcagtggcca agttatgact ttgaaattag ttatagatcc aaaattacta atcgatgtac 1381 agggtacatc caaagctgat atgtttccaa cagaaaatca agatataact caaaatcagt 1441 tgagtcaagt attgggtccc tcatttgtgg atcatattaa aaatatgctt aaacgctcgg 1501 ttacccaacc catattgtca ttggataaaa atgccaatcc ttcaccacaa gaatgttatg 1561 aattgttgac acaggccgtg gaagtattgc gttcacagta tttaaaacgc cacgaattgg 1621 taagagcaga atttgccaag cgcatacaca cgattaaact atgcagggag caacagaaac 1681 aggatatcaa agatttggaa aaggaaagag aaaccataag agataaggca cataaattgg 1741 cagaaaaatt tgaggagatt agcgaacagc aggaagtttt aaataaagta tgtcaagatc 1801 ttatgcgcca agccaatacc tgtttaccca acaacacttt ggccgaaaag gaattcgccc 1861 tagaggtgga acgcattaat aagctaacca agaacatgaa taattcccta cagaagtgta 1921 aagaatccat caataaacag tgctatcata ttgccaaata tggtgagaat gcgaaaaaga 1981 aaactttcga attacccgaa acccaagaaa aaacaattaa agaaatctta ttgcaaatga 2041 atgcagaaat tgatggacaa attaaagaag tcaaacgcat aaacaaagtt gtaggcattt 2101 aaatcattta tgccctactt tctccctcgc cgattaaata tatcaatatc ttcatgatcc 2161 aataaaagaa aaacaaagac aatcaacaac ttttacaatt tcaacacgta a