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PREDICTED: Stomoxys calcitrans sodium leak channel NALCN


LOCUS       XM_059366381            7162 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106090055), transcript variant X1, mRNA.
ACCESSION   XM_059366381
VERSION     XM_059366381.1
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7162
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..7162
                     /gene="LOC106090055"
                     /note="sodium leak channel NALCN; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:106090055"
     CDS             149..6481
                     /gene="LOC106090055"
                     /codon_start=1
                     /product="sodium leak channel NALCN isoform X1"
                     /protein_id="XP_059222364.1"
                     /db_xref="GeneID:106090055"
                     /translation="MSEQLRTRRLGAGRIKTLSATNLAPISGGCTSGFTVTPNISHSA
                     SSHFLQQHIHRNQTQHSTQAQFFTFHHTDSTKRVHPGPPSQSAIISGTKTAGYGFDGT
                     SCISSPTVLNSGSGSGSGSSGLRMPNTNMGPMLGTSATVAINNSYTVHNTTNTMGAGG
                     GAGTSGGHNNGSGVTAGQLGSASAATGGGGGAGIGGGQATTSGLSGVGGNLGGVGMGI
                     CGGISSNAAVITGVPPIGLGLATGIGNKMLGRRQSLKGGEPFLADYGPEESLNESADI
                     EWVNKLWVRRLMRLCALVALASVSLNTPKTFERYPPLQSITFVSDIAVTLLFTAEMIA
                     KMHIRGVLHGEVPYLKDHWCQFDFSMVFFLWISIILQVFEILEVVPKFSSLSMMRAPR
                     PLIMIRFLRVFLKFSMPKSRINQIFKRSSQQIYNVTLFFLFFMSLYGLMGVQFFGELK
                     NHCVMNNSEYDEYDRPLLTLNSLAIPDTFCSMDPDSGYQCSPGMKCMKLDFLSSYVIG
                     FNGFEDIATSIFTVYQAASQEGWVFIMYRAIDSLPAWRAAFYFSTMIFFLAWLVKNVF
                     IAVITETFNEIRVQFQQMWGARGHIQKTAASQILSGNDQGWRLVTIDDSKHGGLAPET
                     CHAILRSPYFRMLVMSIILANGIVTATMTFQHDGRPRHVFYERYYYIEAVFTFLLDLE
                     TLFKIYCLGWRGYYKHSIHKFELLLAAGTTIHIVPYFYLSGFTYFQVLRVVRLIKASP
                     MLEGFVYKIFGPGKKLGSLITFTVCLLIISSSISMQLFCFLCDFTKFETFPEAFMSMF
                     QILTQEAWVEVMDETMIRTSKTLTPLVAIYFILYHLFVTLIVLSLFVAVILDNLELDE
                     DIKKLKQLKFREQSAEIKETLPFRLRIFEKFPQSPQMTILHRIPNDFTLPKVRESFMK
                     QFVIELETDDPSMESCKRPMSEYWESKMVFRKQKPVRIMNKTAKVRSAGSSLRKLAIT
                     HIINDSNNQRLMLGDSAMLPVVGGKCGLKSQGTITHSKPWRVDQKKFGSRSIRRSVRS
                     GSIKLKQTYEHLMENGDIASAPRANSGRARPHDLDIKLLQAKRQQAEMRRNQREEDLR
                     ENHPFFDTPLFLVPRESRFRKICQKIVHGRYDARLKDPLTGKERKVQYKSLHNFLGLV
                     TYLDWVMIFVTTLSCISMMFETPNDRVMDHPTLQIAEYTFVIFMSLELALKILADGLF
                     FTPKAYIKDVAAVLDVFIYIVSTLFLCWMPKQIPTNSAAQLLMVLRCIRPLRIFTLVP
                     HMRKVVYELCRGFKEILLVSTLLILLMFIFASYGVQLYGGRLARCNDPTITKREDCVG
                     VFMRRVFVTKMKLTLGEGESYPAMLVPRVWANPRRFNFDNIGDAMLTLFEVLSFKGWL
                     DVRDVLIKVVGPIQAVYIHIYIFLGCMIGLTLFVGVVIANYSENKGTALLTVDQRRWC
                     DLKKRLKIAQPLHLPPRPDGRKVRAFAYDVTQHIYFKRFIAAIVLINSALLSITWIKG
                     ESITEICILLSVTLTFVFVVEVVMKIIAFTPRGYWQSRRNRYDLLVTVSGVVWIFLQT
                     ILRVEIFQNFKNYILIALCSFQNDLSYFFGFMVVILRFFTITGKHTTLKMLMLTVGVS
                     VCKSFFIIFGMFLLVFFYALAGTILFGTVKYGEGIGRRANFGSPVTGVAMLFRIVTGE
                     DWNKIMHDCMVQPPYCTPGNNYWETDCGNFTASLIYFCTFYVIITYIVLNLLVAIIME
                     NFSLFYSNEEDALLSYADIRNFQNTWNIVDIHQRGVIPVRRVKFILRLLKGRLECDPQ
                     KDRLLFKYMCYELDKLHNGEDVTFHDVINMLSYRSVDIRKALQLEELLAREEFEYLVE
                     EEVAKMTIRNWLEGCLKKIRAQNAYKQQNSLIAGLRATNEPMIRPSVQEDKTPTGIGE
                     KSAIATISGSVAAATCPPTSDAFSPTFSSTENEEKDLSTSAIAPTPGAAETATVQVTQ
                     RAITATKRGYALNRSDSTGSSAGRKFLAPTSSDPQQRSTLSDKERLHITNQQKKKNSM
                     TTSTLPVAPAPVISGPGHKKNSFFAADISQFHYPTLNHFDHGHIPALGSPSGLMPHII
                     PGTKLLPFNNQANAVYEVHDWWQEQVLCTQNSDDEM"
ORIGIN      
        1 aaaaacttta atataactgt tatacaggga gaatgcattc attttcattt tggcactaca
       61 gcagtacgtg taatttgtaa acacaggaag atatttcaac aatatcttgc atccggcatc
      121 gagatgataa ttacctctga tattttgaat gagtgaacaa ttgcgaactc gtcgcttagg
      181 agctggtcgt attaaaacac tgtctgccac aaatcttgca cccatcagtg ggggatgtac
      241 tagcggattc actgttacac ctaatatcag tcacagcgct agcagtcatt tcttgcaaca
      301 gcacatacat cgcaatcaaa cgcaacattc aacacaggca caatttttta ccttccacca
      361 cacggacagt accaaaagag ttcatcctgg tcccccttca cagtcggcga ttatcagcgg
      421 cacaaaaact gcaggttatg gctttgatgg caccagttgc attagtagtc caactgtttt
      481 aaattcaggc agtgggagtg gcagtggtag tagtggtcta cgtatgccca acaccaatat
      541 ggggccaatg ctgggaacat cggccactgt tgccattaat aacagctaca ctgttcacaa
      601 caccaccaat acaatgggtg ctgggggagg tgcgggtacc tcaggtggcc acaataatgg
      661 ttctggtgtc actgcaggcc aactcggtag tgcttcggcg gcgaccggtg gaggaggtgg
      721 tgcaggaatc ggtggtggtc aagcaacaac atctggcttg agtggcgtcg ggggaaatct
      781 gggcggcgtc ggtatgggca tttgcggcgg tattagtagc aatgctgcgg ttataactgg
      841 agtgccgcca ataggacttg gacttgcaac cggcattggt aacaaaatgc tcggtcgaag
      901 gcaaagtctg aagggcggcg aaccatttct ggccgactat ggtccagagg aatcgctcaa
      961 cgaaagtgcc gatattgaat gggtgaataa actgtgggta aggcgcctaa tgcgactttg
     1021 cgctttagta gccttggcct cagtctcatt gaatactccg aaaactttcg aacgatatcc
     1081 acccctgcag tcaataacat tcgtatcgga catagcggtg acgctactat ttaccgctga
     1141 aatgatagcc aaaatgcaca tacgcggcgt tttacacggc gaagtaccat atttaaagga
     1201 tcattggtgc caatttgatt tttctatggt attcttttta tggatttcga taatccttca
     1261 agtatttgaa atacttgagg tagtgccaaa gttttcatcc ttatctatga tgagagctcc
     1321 tagacccctt ataatgatcc gcttccttag agtcttcctg aaattctcaa tgccaaaaag
     1381 ccgtattaat caaattttca agcgatcgag tcaacagatc tacaatgtca ccttgttttt
     1441 tctcttcttt atgtccttat acggcctaat gggtgtccag ttctttggtg aattaaagaa
     1501 tcattgtgtc atgaataata gtgaatacga tgaatacgac cgaccgcttt taactctgaa
     1561 ttcgcttgcg attcctgaca cattctgctc catggatcca gattcgggct accaatgttc
     1621 cccgggaatg aaatgtatga agttggactt tctcagcagc tacgtaatcg gatttaatgg
     1681 tttcgaagat atagccacga gtatttttac cgtttatcag gctgcgtctc aagaaggatg
     1741 ggtatttata atgtatcgtg ccatagactc gttgccagca tggagagccg cattttattt
     1801 tagtacaatg atatttttct tggcctggct ggtgaagaat gtcttcattg ctgtcatcac
     1861 tgagacattc aatgagattc gggtgcaatt tcaacaaatg tggggagctc gaggacacat
     1921 ccaaaagaca gctgcttcac aaatcttaag tggaaacgat cagggctggc gtttggtaac
     1981 catagatgat agtaaacatg gtggtttggc accggaaaca tgtcacgcca tattaaggtc
     2041 gccatatttt cgtatgctgg taatgtcgat cattttggcc aatggtattg tcactgcgac
     2101 tatgaccttt caacatgatg gtcgtccacg acatgtattt tacgaacgtt attattacat
     2161 agaagccgtg tttacgtttt tgctggatct ggaaacgtta tttaaaatct attgcttggg
     2221 ttggcgagga tattacaaac actccataca taagtttgaa ttgttgctgg ctgcaggaac
     2281 cacaatacat attgtacctt acttttacct ctcgggattt acatattttc aggtgctgcg
     2341 agttgtacga cttataaaag catcgcctat gttggagggc ttcgtctata agatttttgg
     2401 tcccggcaaa aaacttggct ctctcatcac cttcactgtt tgcttgctca ttataagttc
     2461 cagcatttca atgcaactgt tttgttttct ttgcgacttt acaaaattcg aaacattccc
     2521 cgaggcattc atgtctatgt ttcagattct cactcaggaa gcttgggtag aggttatgga
     2581 cgagactatg atacgtacta gtaagacatt aactccactg gtggccatat atttcatact
     2641 ctatcacttg ttcgtaacac tcattgtgct gagtttgttc gtggcggtta ttttggataa
     2701 cttggaattg gatgaggaca ttaagaaatt aaaacagctc aagttccgtg agcaaagtgc
     2761 tgaaattaag gagaccctcc ccttccgatt gcgtatattt gaaaaattcc cgcagtcacc
     2821 acagatgact atattacacc gcatacctaa tgatttcacg ttgccaaagg tacgggagtc
     2881 atttatgaag caatttgtca ttgaacttga aacagatgat ccctcgatgg agagttgcaa
     2941 gagacccatg tccgaatatt gggagtctaa aatggtattt cgcaaacaaa aaccagtaag
     3001 aataatgaac aagacagcaa aagtgcgttc agctggaagt agtttaagaa aattggccat
     3061 aacccatatt ataaatgatt cgaataatca acgtttgatg ctgggcgatt ctgccatgtt
     3121 acccgtagtt ggtggaaaat gtggtttgaa gagtcaagga accataacac attccaaacc
     3181 ctggagagtc gaccaaaaga aatttggttc tcgttccatt cgacgcagcg tacgttctgg
     3241 ctctataaaa ctcaaacaaa cctacgaaca tcttatggaa aatggtgaca tcgcttcggc
     3301 acctagagcg aattctggac gagcaaggcc ccatgatttg gacataaaac tgttgcaagc
     3361 taaacgccaa caagccgaaa tgagacgtaa tcaaagagaa gaagatttgc gtgagaacca
     3421 tccatttttc gatacgccct tgtttctggt accaagggaa agccgttttc gcaaaatctg
     3481 ccagaaaatc gtgcacggcc gctatgatgc tcgcctaaag gatccactaa cgggcaagga
     3541 gcgcaaggtc cagtataaaa gtttgcacaa ctttttgggt ttggtaacct acttagattg
     3601 ggttatgata tttgttacca ctttgtcctg catatcgatg atgtttgaga cacccaacga
     3661 tcgtgtgatg gatcatccca cactgcaaat tgccgagtat acatttgtta tttttatgag
     3721 tctagagtta gctttgaaaa ttctggcgga tggtttattc tttactccca aggcctatat
     3781 aaaggatgtg gcagcagttt tagatgtctt tatttatatt gtatctactt tattcctatg
     3841 ctggatgcct aagcaaatac ccaccaattc ggctgctcaa ttgctgatgg ttctacgttg
     3901 tatacgtcct ttgcgaatat tcacattagt gccgcacatg cgcaaagttg tctatgaact
     3961 ttgtcgtggc ttcaaagaaa ttcttttggt atcaacttta ctgattttgc tgatgttcat
     4021 atttgccagt tatggggtgc aattatatgg tggacgttta gcacgctgca atgatcccac
     4081 gataacaaag cgtgaagatt gtgttggcgt cttcatgcgt cgtgtatttg tcacaaaaat
     4141 gaagcttacc ctcggagagg gtgagtcgta tccggccatg ctggtgccaa gagtatgggc
     4201 taatcccagg agattcaatt tcgacaatat tggagatgcc atgctgactt tgtttgaggt
     4261 cttgtcgttc aaaggatggc tagatgtgag agatgtctta atcaaggtcg ttggaccgat
     4321 tcaagcggtc tacatccaca tctatatttt cttgggctgc atgattggtc taaccttgtt
     4381 tgtgggtgta gtcattgcca attattcaga gaataaaggc acagctctac taactgtcga
     4441 tcagagacgt tggtgcgatt tgaagaagag attgaaaata gcccagcctt tacacttgcc
     4501 accccgtccg gacggacgaa aagttcgagc ctttgcttac gatgttactc agcatattta
     4561 ttttaagaga ttcatagcag cgatagtttt gataaacagt gcattattgt cgataacgtg
     4621 gatcaaaggc gaaagtataa ccgaaatctg cattttgtta agtgtcactt tgacatttgt
     4681 atttgttgtg gaggtggtta tgaaaatcat tgcatttaca ccacgtggct attggcaatc
     4741 gcgacgtaat cgttatgact tattagtcac tgtttctgga gtggtttgga tattcttaca
     4801 aaccatattg agggtagaaa tatttcaaaa ctttaaaaat tatatattaa ttgctctatg
     4861 ttcctttcag aatgatttgt cttatttttt cggttttatg gtggtaattt taaggttttt
     4921 caccattacc ggcaaacaca ccacactaaa aatgttgatg ttgactgttg gtgtatctgt
     4981 gtgcaaatcg ttcttcatta tattcggaat gtttttgctg gtattcttct atgctttggc
     5041 tggaacgatc ctttttggta ccgttaagta tggtgaaggt attggaagac gagcaaattt
     5101 cggttctccg gtaaccggag ttgccatgtt atttcgtatt gttacgggtg aagattggaa
     5161 caaaataatg catgattgta tggtgcagcc cccatactgt acgccaggga ataattattg
     5221 ggaaactgat tgtggcaact ttacagccag tcttatatac ttttgcacat tctacgtaat
     5281 tatcacctat atagtgctga acttgcttgt ggctattatc atggagaact tttcattgtt
     5341 ctactctaat gaggaagatg cactgctctc ttatgccgat atacgaaatt tccaaaacac
     5401 ttggaacatt gtggatatac accaacgtgg tgttataccg gtgcgcagag ttaaatttat
     5461 tttacgcctt ttaaaagggc gacttgagtg cgatccgcag aaggaccgat tattgtttaa
     5521 atatatgtgc tacgaattgg acaagctgca taatggagaa gatgttacct tccacgatgt
     5581 gatcaatatg ctctcctatc gctcagtgga tattcgaaaa gccttacagt tggaggagtt
     5641 actggcacgt gaagaatttg agtatttggt ggaggaagaa gtagccaaga tgaccataag
     5701 aaattggttg gaaggttgcc ttaaaaagat aagagcacaa aatgcatata aacagcaaaa
     5761 ttctcttata gccggattgc gtgctactaa cgagccaatg ataaggccta gcgtgcagga
     5821 ggacaaaaca cccactggta taggagagaa atccgcaatc gccactatta gtggatctgt
     5881 ggcggctgca acatgtcctc caacaagcga tgctttttcg ccaacattca gttctactga
     5941 aaatgaggaa aaagatttaa gtaccagcgc gatagcccca acacctggcg ctgctgaaac
     6001 tgccaccgtt caagtgaccc aacgtgccat tacagccaca aaacgaggct atgccttaaa
     6061 tcgttccgat tcaaccggaa gttctgccgg tcgaaaattc cttgcaccaa cttcatcgga
     6121 tccccaacaa cgctcgacct taagtgataa agaacgtttg catataacca atcagcagaa
     6181 gaagaagaac tcaatgacca cgagtacgct gccggttgct ccagcgccag ttatttccgg
     6241 tccgggtcac aagaagaaca gtttctttgc tgccgacata agtcaattcc actatcccac
     6301 gctcaatcat tttgatcatg gacacattcc cgcactaggc agtccatcag gtctcatgcc
     6361 ccacataata cctggtacta aactgttacc gtttaataat caggcgaatg cagtctatga
     6421 agttcatgat tggtggcagg agcaagttct ctgcacgcag aatagcgatg atgaaatgta
     6481 gtttatatcg attaccaaat agcttttaac gaaaacgcat cctcatgtac ttagtttata
     6541 tgcgaatata ttttttatac tgcattcata tgtaagtgca acgaagctaa ttatatacat
     6601 acatccatac atagatacat atttttaagt aagttgaatt taatgtaaac ttgttatatt
     6661 tgtgttagtt ttctcatata tagtgtatag aaatatattg ttaataaata agcagctgta
     6721 ttgtcatatt gttactatat caaatgagtt gccgctggtt ggcgaaaatt tatatgattc
     6781 accataggat gggggtatac tactttcgtc attctgtttg taactcctcg aaatatgctt
     6841 ctcagacccc ataaagtata tatgttcttg atcgtcatgt cattttaagt cgatctagcc
     6901 atttccgtcc gtcggtctgt ctgtcgaaag cacgctaact tttgaagtag taaagctagc
     6961 cgcttgaaat tttgcacaaa tactttttat tagtgtaggt cggttgggat tgtaaatggg
     7021 ccaaatcggc aaatgttttg atatagctgc catataaacc gatcatgggt cttgacttat
     7081 tgagcctcta gagggcgcaa ttctcgtccg atttgactga aattttgcac atggtgtttt
     7141 gttatccaac aactgtacta ag