Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_059366359 6913 bp mRNA linear INV 02-SEP-2023 ABCA3 (LOC106085149), transcript variant X1, mRNA. ACCESSION XM_059366359 VERSION XM_059366359.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6913 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..6913 /gene="LOC106085149" /note="phospholipid-transporting ATPase ABCA3; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 Proteins" /db_xref="GeneID:106085149" CDS 714..5903 /gene="LOC106085149" /codon_start=1 /product="phospholipid-transporting ATPase ABCA3 isoform X1" /protein_id="XP_059222342.1" /db_xref="GeneID:106085149" /translation="MAHVGSWEKFKLLTWKNWLLQWHHKIQFAIEIFVPVIFSLLMVL VRALVVAEEKPITEYQPQTLENINLFRKTVVPASRMRNLLKSALNKDRYQMSIMEFVK PVKYNLLYSPNNPFIRNIACEAAQKLDLQCIEKNDAAALEFAMISDNHLVGVQFDDDF YNLDEYPTKLAYSLRYPSELRTWTSNLALTWLTMKLFLPLDLTGPRNPSAQDGGLPVG YLRESFLPVQNAISMAYTKLVSNRTDLPLVDMQRFPYPEYIYDPLLEGMASFVPLIVL LSFIYPCSNIVRYITAEKEKQLKEVMKIMGLDNWIHWTAWFCKNFIMLAVSAILITII MKIRWSHDVAVFTFADWSALLFFMLVYMITSICFCFMMATFFSKASTAAAVTGLVWFI AYMPYSFMYQTYDELSLGTKMGWCLISNTAMGLGLNIIMLFEGTGEGLQWSNLFTPVN IDDDLTVGYVIIMMLASCVIYILVCLYVEQIFPGDYGVPRKWNFIFSRKFWCGENDYI GVEDMPQEHIERRNPDAFEPEPAGKHIGLQVRNLKKRFGDKHAVKGLSVNMYEGEITV LLGHNGAGKTTTISMLTGMFPPTSGTAILNGSDIRTNIEGARMSLGLCPQHNVLFDDL TVADHLIFFSRLKGLKGDAITQEVNKYIRMIELEDKANVASSKLSGGMKRKLSVCCAL TGNTKVVMCDEPSSGMDPSARRQLWDLLQAEKAGRTVLLTTHFMDEADVLGDRIAIMC DGELKCHGTSFFLKKKYGSGYKLICVKRDGCKAEELTALLRKYVPNIQPEADIGAELS YQLPDTYSHLFEEMFSDLERESDNLKLNGYGVGITSLEEVFMKVGAEDSNANGDTHKE TSARMNGANAYHEDDAESVTSDRLFSENVHLLKGVNLLRNQWDAMMWKKILQTWRSKF LFLIQNIMPIFFVVMTVIIARTQGTFKPLQPMTVSLTQYPVGVSVLETAPDVAGNSFM AAVSSQYKVVAQSYGSDYELELTGSKSFSEYIVELGRKIQVRINSRYLAAASIRSNNI TAWLNNQPLHTAPLTVNLVHNAIVKAAMNESYEIEVTNAPLPYSTETVLNQLNTGNNL GTQLSTNLCFCFCFVSAFYILFPIKERESRSKLLQFVSGVNIWIFWITQFLWDMLTFT LTAIIVVCTIACFQEEGFSAFGDLARYFLVIFIFGFSVLPFTYLISMFFSEPSTGFGR VSIINIFCGMALFIVVAVMSIDFLGTKSTADLLGWIFRIFPHFSLAMGLNKLYVNVAT RDACSNKMIVILPDALRCQLVPKCCYTIPYFDWEEPGILPEIVYLVGTAIAFLTILIL REYGILNELIYKWKQRNFKPTPPAPDAYYDDDVEKEKNRILNMTPTDLSIWNLVLDRV TKYYDKFLAVNEISLCVKPVECFGLLGVNGAGKTTTFKMMTGDERITSGNAYVKGMNL AADVNSVYKEIGYCPQFDALLDDLTGRETMRIFCLLRGVRRDRISNISEELAKSFGFM KHFDKETKAYSGGNKRKLSTALAVIGSPSVIYLDEPTTGMDPAARRQLWNMVCRIRDS GKSIILTSHSMEECEALCTRLAIMVNGEFKCIGSTQHLKNKFSKGLILKIKVRRSTDI IKSSNGRTLRIGSNSALPHVMEQDIQNVRTFIETEFPRAELQENYQGILTFYIPLSSI KWSQIFGLMESNRDQLNIEDYSISQTTLEEIFLDFAKYQREDTRQVTNNSWCSCCNKQ AEE" polyA_site 6913 /gene="LOC106085149" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aacatttgta acgataacaa caagaggcgg ttactttgtg tttttttgtg gtctactgtg 61 taaataagtt ttttgtccga caaaaacatt tgaaataaag agaagattgt gccaatgagt 121 gaatagctta tacctaatta tgaatgaata tatatgcata tactgttgaa gtgttcctat 181 gtctattaat tcaaagtttg gtgaatgtgg gcaaaataaa aattgcaaat aaactaattt 241 tagtgatgaa aaacaataac caaagataaa aaattcagcg gcacggaagt cattaaagcg 301 taaaactgta aatactaaaa actatatttt gtaatttgca ctgtgtttaa attggatggc 361 aattttgtga tgaaataacg taaattcccc ctatatataa aacagtgatt cattttgtgt 421 aagcgcagct tttgtcagca ttttctttgg ccggcacaaa gattcaacaa aataccttgg 481 aggtcttggg actaaaatac catatacaca tctacatcaa taagaaaacc ttatgcaact 541 acaaacatca tatttttata tgttccaaac gatttccaca taggccatct caaatctaac 601 aaaacaactt aaatatctct acattaaatg tctcaaaaca taaatatttt ataaaaaata 661 ataattacga ttataagaaa caaaaataga aaaagaaaaa tattttatgg aaaatggcac 721 acgtgggcag ttgggaaaaa ttcaaattgt tgacatggaa aaattggctt ctacaatggc 781 atcacaaaat tcaatttgca atagaaatat ttgtgccagt gatcttctca ctgttaatgg 841 tgttggtacg agccctggtg gtggcagaag aaaagccgat taccgaatat caaccgcaga 901 ctcttgaaaa tattaatttg tttaggaaaa cagtagtacc agccagcaga atgcgtaatt 961 tactaaaatc tgccttgaac aaagacaggt atcaaatgtc cattatggaa tttgtaaagc 1021 ccgtcaagta caatcttctc tattcaccga acaatccgtt cataagaaat atcgcctgtg 1081 aggctgcaca aaaattagat ttacagtgca tagaaaaaaa tgatgcagcc gccttggaat 1141 tcgctatgat ctctgacaat catttggtcg gtgtacaatt tgacgatgac ttctacaatc 1201 tggatgagta tcccacaaaa ctagcatact ctttgcgtta ccccagtgag ctgagaacat 1261 ggacttcgaa tcttgcctta acatggttga caatgaagct atttttaccc ctggatttga 1321 cggggccacg taacccctcg gctcaggatg gtggtttgcc ggtgggttat ttacgcgaaa 1381 gttttctacc cgttcagaat gcaatttcca tggcctatac aaaactagta tcaaatcgca 1441 ctgacttgcc cctggtggat atgcaacgtt ttccctatcc agaatacatt tacgatccac 1501 tgctagaggg tatggcaagt tttgtgcccc taattgtttt gttaagtttc atctatccct 1561 gctcgaatat agtgcggtac atcactgccg aaaaggagaa acaattgaag gaagttatga 1621 aaatcatggg tttggacaat tggatacatt ggactgcatg gttttgtaaa aacttcatca 1681 tgttggcggt ttcggctatt ctaatcacca taattatgaa gattcgatgg tcgcacgatg 1741 ttgctgtttt cacatttgcc gattggtcag ccttgctctt tttcatgttg gtctatatga 1801 taaccagcat ttgtttctgt ttcatgatgg ccactttctt ctcgaaggcc agcactgcgg 1861 ccgctgttac cggcttggta tggttcattg catacatgcc ctactccttc atgtaccaaa 1921 cctatgatga attgagtttg ggcaccaaaa tgggttggtg tctcatatcg aacaccgcca 1981 tgggtcttgg tctaaatatt atcatgttgt tcgagggcac gggagaggga ttgcagtgga 2041 gtaatctttt tacccccgtg aatatagacg atgatctgac tgtgggctat gtcatcatca 2101 tgatgttagc atcatgcgtc atatacatct tggtgtgtct gtatgtagag caaatattcc 2161 ccggcgatta tggtgtgcca cgcaaatgga atttcatatt cagtcgcaaa ttttggtgcg 2221 gtgaaaatga ttatataggt gtcgaagata tgccccaaga gcatatagag cgtcgcaacc 2281 ccgatgcatt tgaaccagag ccagccggca aacacatcgg tctgcaagtg agaaacctaa 2341 agaaacgttt tggtgacaaa catgctgtga agggtctatc ggtcaatatg tatgaaggcg 2401 aaataacagt gctgctgggg cacaatggtg ccggcaagac taccaccata tccatgctga 2461 cgggtatgtt ccctcccaca tccggtacgg ctatactcaa tggcagcgac attcgcacaa 2521 atatcgaagg tgcccgcatg tctttgggtc tttgtccgca acacaatgtt ctattcgatg 2581 atttgaccgt ggccgatcac ttgatcttct tcagtcgtct gaaaggtctc aagggtgatg 2641 ccataacgca agaggttaac aagtacatac gaatgatcga attggaggat aaagccaatg 2701 tggcctcaag caaactatcg ggtggtatga agagaaaact atcggtctgt tgtgctctca 2761 ccggaaatac caaggtggta atgtgtgatg aacccagctc tggcatggat ccctcggctc 2821 gtcgtcaatt gtgggattta ttgcaagctg agaaggctgg acgcaccgtg ctattgacca 2881 cacatttcat ggatgaagct gatgtcttgg gtgatcgtat tgccattatg tgtgatggtg 2941 aattgaaatg tcatggcact tcgttctttt tgaagaaaaa atatggatct ggatacaaat 3001 tgatctgtgt caaacgtgat ggctgcaagg ccgaagaact gacagctctt ttgcggaaat 3061 atgtgcccaa tatacaacct gaagctgata tcggcgccga gttgagctat cagttacccg 3121 atacctattc acatctgttt gaggaaatgt ttagtgactt ggaacgcgaa tcggataatt 3181 tgaaactcaa tggctatggt gtgggcataa catctctgga agaggtcttt atgaaagtag 3241 gtgctgaaga ttccaatgca aatggtgata cccataaaga gaccagtgca cgaatgaatg 3301 gggccaatgc ctatcatgaa gatgatgccg aatctgtgac atctgatcgc ttattctccg 3361 aaaatgtcca cttactgaaa ggtgtcaatc tacttcgaaa tcaatgggac gccatgatgt 3421 ggaagaaaat tttgcagaca tggcgcagca aattcctctt tttgatacaa aatataatgc 3481 ccatattttt cgttgttatg accgtcataa tcgcaagaac acagggtaca ttcaagccat 3541 tgcagccgat gacagtgagt ttgactcagt atcccgtggg cgttagcgtt ttagaaacgg 3601 ctcctgatgt agctggcaat tcctttatgg ctgctgtctc aagtcaatat aaagtggttg 3661 ctcagtcata tgggagtgat tatgaattgg aattaactgg ctcgaagagt tttagcgagt 3721 acatagtgga attgggccgc aaaatacaag tgagaataaa ttcaagatat ttggcagcgg 3781 catctataag atcgaacaac atcacagcct ggctgaataa tcagccctta catacggctc 3841 cattaacggt gaacctggtg cataatgcca tcgtcaaggc tgccatgaat gagtcctatg 3901 aaattgaggt tacaaatgcc ccattaccct attccacaga gacggtattg aatcaattga 3961 ataccggcaa taatctgggt acacagttat cgacgaattt atgtttctgc ttctgtttcg 4021 tgagtgcttt ttacattttg ttcccaatca aagagcgtga atctcgttcg aaacttttgc 4081 aatttgtgag tggcgtcaat atatggatct tttggataac acaattcctg tgggacatgc 4141 tgacctttac actgaccgca attatagtgg tctgtacgat agcatgtttc caggaggagg 4201 gattttcggc ctttggcgat ttggctcgct atttccttgt tatatttata tttggatttt 4261 cggtgcttcc atttacatat ctgatttcaa tgttcttctc ggagccttca actggatttg 4321 gcagagtttc cattatcaat atattctgtg gtatggccct attcattgtc gttgctgtca 4381 tgtccattga tttcctgggt acaaaatcca ccgccgatct tttgggttgg atctttagaa 4441 tattccctca tttctctctg gccatgggtc tcaataagct atatgtcaat gtggcaacac 4501 gtgatgcctg cagcaataaa atgattgtaa tattgcccga tgctctcaga tgtcaattgg 4561 taccaaaatg ttgttacact ataccctatt tcgattggga agagcctggc attttacccg 4621 aaattgtata tttagttggc actgctattg cattcttgac cattttgatt ttacgcgaat 4681 atggcatttt aaatgaattg atttataaat ggaaacaaag aaatttcaaa cccacaccac 4741 ctgctccaga tgcctattac gatgatgacg ttgagaagga gaaaaatcgc attttgaata 4801 tgacccccac ggatttgagc atttggaatt tggttttaga tcgcgttacc aagtattatg 4861 ataaattttt ggctgttaat gaaatatcgc tgtgtgttaa acctgtcgaa tgctttggcc 4921 ttttgggtgt caatggtgcc ggtaagacga ccacctttaa aatgatgact ggtgatgagc 4981 gtattaccag cggcaatgcc tatgtcaagg gcatgaatct tgcggccgat gtcaacagtg 5041 tttacaaaga aatcggctat tgtccacaat tcgatgcatt gcttgatgat ttgacgggcc 5101 gtgaaactat gcgcattttc tgtctgctac gtggtgtgag acgtgatcgt ataagtaaca 5161 tatccgaaga attggccaaa tcatttggtt ttatgaaaca tttcgacaag gagaccaaag 5221 cctatagtgg tggcaacaaa cgtaaattga gtacagcttt ggctgtcata ggcagtccat 5281 cggttatata tttggatgaa cctaccacgg gtatggatcc tgccgcccgt cgccaactat 5341 ggaatatggt gtgtcgcatt cgagattcgg gaaaatccat aattttaacc tcacatagta 5401 tggaagagtg tgaagcgttg tgcacacgtc tggccattat ggtcaatggt gaattcaagt 5461 gtataggttc cacacagcat ttaaagaata aattctccaa gggtctcatt ttgaagatca 5521 aagtgaggcg tagtacggat atcataaagt cgagcaacgg ccgcacctta agaataggta 5581 gcaactctgc tttgccacat gtaatggaac aggatatcca aaatgttaga acatttattg 5641 aaaccgaatt cccaagagcc gaattacaag aaaactacca aggtattctt accttctaca 5701 ttccattgtc cagtattaaa tggtctcaaa tctttggcct tatggaaagt aatcgagacc 5761 aattgaatat cgaagattat tcgatatcac agacgacatt agaagagatt ttcttagatt 5821 ttgccaaata tcagcgagaa gacacccgac aagtcaccaa caactcatgg tgttcctgct 5881 gcaataaaca agctgaagaa tgattctgga atgcaaagaa ccgcctgata ggtctgtgga 5941 agggaggaga tcccccccaa gcctatgccc tataaatgta tacgtgataa tagataacag 6001 aagtgatcca caaagaatgt cagtacaatc aatagaaaaa caaaaataaa acggaaccgt 6061 gatctatact accaaaagaa tgtataaaaa aaatagaaac atacattgaa tgctaaaatt 6121 aaattgtata taaataagta attatatagt aatatataac aaatacgaat gcctaaacta 6181 ttattacatt tatatattat ataaaaaaat ctacaatctt catatataca tgcatatgct 6241 atgtatgtat ctcaacaatg ccactacgaa aatcatataa acaaatgtat ttttataaat 6301 gtgtattttt tttaggaaaa aactcatata tgtaattata ttcatagttt ttgatgtttt 6361 tttcctccta cttttgttga tacattttaa gtattggggc ttttcagagg cagattttag 6421 tattacgaaa gtgctttaaa ttcttaaaga atgattggaa atgaaaaaaa aaatatctaa 6481 atgttcctaa gttattgtag tgtagtgaaa agagagagat gcttaatcaa ctttagctgg 6541 aaattggtaa attttattca taaattttag acgcctcgta ctcagctcgc attgacacca 6601 cataaattac aaaaataaaa tgattacgaa tttttcaatc tcctccaaaa aaggagattt 6661 ctatgtactt atgttaagga atttaaattt ttgtatgtgt caattgtttt tatacatgta 6721 tttggtggat gtgatgacat ctcaattttt tttttacctc atccttatat ttttttatga 6781 atttttacat gactattagc cagtgattta gtatacatga aatattatgg aattagttac 6841 attttaagtt ttaaaaattg aattttattg tgaataaaat aaaaataaat attataatta 6901 accaccacta aaa