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LOCUS XM_059366288 7033 bp mRNA linear INV 02-SEP-2023 (LOC106081410), transcript variant X4, mRNA. ACCESSION XM_059366288 VERSION XM_059366288.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7033 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7033 /gene="LOC106081410" /note="interference hedgehog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106081410" CDS 957..4016 /gene="LOC106081410" /codon_start=1 /product="interference hedgehog isoform X2" /protein_id="XP_059222271.1" /db_xref="GeneID:106081410" /translation="MLPTTGTATTTAAPAPAPPTASTTTTLFHKNTCSSLLPPFVRTS LCSSSGGFFAFSPLSVIVKSVIFFLAFATSACLASQPPTLGVHFVRSPESAVAPKGDE VVFECEMNLGPERLEWKFRHSSNRTADGSRFIYLSKESGYNITNDEKNSKLRFVVQPE TLGDYQCVAWYGSAAIASLSARLTLVSISIDNSNGYSRNAIRWNVAPKNHILLRCGTV SSNPAAIWSFYRNGEKIPQSEVIPANGALVLNTVTAKDSGNYTCSAMNPITSQEVKLP QRIDLRVDYSDRTPPYFLTQPPTQVTARPGETVVLECPGVGSPPPVAVWSSPNIINMN NNNRTRLLPYGLQIVDVVPEDQAQYVCRLDNGIAPALVHGIKLNVLEKPSILRGPALT LTNESDTLELECSAAGNPYPDIYWLINDVDTTMDPEMQHDGRRLVIRHVQKRHAGIVQ CFAKNEVGEVSDANLLKINPRQIHGSSASAATPRPRYEDVGGGTKKGSRKKHKPTMVP PSRPNVTRLSDDSVMLRWYVPKNDGLPIQFFKVQYRMLGDASRKIPRENWQTTNDDIA YGKRNTDISKNYTTSVTGLKPDRFYRFRIVAVYNNDDNKEGNTSSKFFLQRGDALDLS KSNLPIPELARIEALSESAVMLQWSLPTAAATSHIDGFYAYYRPAASAGEYQKATVDG MHTRKFKIDMLEAGTAYEFKLQSFNDMAASEFSAIVQGKTKKSVTTPAPTLPAVVPAT KANQEDNSIFPVVAGAAGGGILLLIATIAACLCMKKRKNSQNEDENKPQLDHIQADFV TPQVQVLGVNNHHKGNHRLNGVLPRMNITPNPLAQEADKAHLASQGIHHAQPYYQTPP TPTMMNKRDYQQPPPVPPHQNNNHAPMMNHHLPPTGHHAPLTPSMEQQRRTLDRGVRN MNYNQSNGNAMSPPSHDAALNMDGMATRIPSLRRTRRTSGGSTNNALNALSNNPNGGL GIPIAVSGSPRVQRSPMPARAAMMKQRSRLGSHNDNISSGSLNSIEV" ORIGIN 1 gtgttagcac gttggaaatt ggtgcggcgg gatattagtt gttgttgttt tacgtaaaaa 61 tccagtcata cgcattgtgg aaaggaagat ggcattttgc aataaaagaa ataaactata 121 aggaagtgct taaaatacta catgcaaata aactagcaaa gcggtagtgc aagtgattga 181 ttcttgggaa aaaatagtga agaattgata caggtgttaa acgaaagcag aaatagaatt 241 agaaaataaa atataaaccg aatgctattt gaaatctttt aaaagttaac taagttcaaa 301 tttttgaagc tttccgtggg tgtctgtttt ataaaaaagt ttaaacaaat tgttttcata 361 caattaatta aaacattaaa atgttttaaa actaaatttg tgttaaaaac gtgatcgacc 421 gtcttgcttc tgtcaatctc ttgtgtttct ggcatttgca agtgaggaga aaaaaaatac 481 ataggaaaaa aaaactcgcg ctcccccttg tgcgtatgct cacatcaatt ctcacttgcc 541 atagtcagca agctagcggg cgcgcgcatt gcttgtgcca ttcagtgaat attgaataga 601 ttttatgaat gaataaagaa taactgtggc ggtgacgaca aacaacaacg aacgagcgac 661 cggctagcag aaatattgtt ttgataccag atttccttgg caaacaaaaa ctctaagaaa 721 taaaagtatc caacaatata atcaaaagga agttacaaat ttaatttcta aaacaaaaga 781 tgtgcatcct gttaatgaac tttaccagtt gtaaatgtta attaaagcat cttgaaaata 841 atttctacta aagttttaaa gttcaatgta attggaattt aaagcagcgt agaagaaaga 901 agtcaacata aaatttttgc aaattttatg cgccaacaac aaaagtgaca agcacaatgt 961 tgccgacaac aggaacagca acaaccacag cagcaccagc accagcaccg ccaactgctt 1021 ctacgacgac aacattattt cataaaaaca cctgctcatc attgctgccg ccttttgttc 1081 gaacctcatt atgctcatct tccggcggct tttttgcctt ctcgccacta tctgtcatcg 1141 ttaaatctgt gattttcttt ttggcctttg caacaagtgc ctgccttgcc tctcaacccc 1201 ccacattagg ggtccacttt gtgcgatctc ctgagtcagc ggtggcaccc aagggagatg 1261 aggtggtctt tgagtgtgaa atgaatttag gtcccgaacg tttagagtgg aaatttcgtc 1321 actccagcaa tcgaacggca gatggaagtc gatttattta tctatccaag gagagtggct 1381 acaacataac caacgatgaa aagaattcca aattacggtt cgtcgtgcaa cccgagacct 1441 tgggcgacta tcaatgtgta gcctggtatg gctctgcggc cattgcatct ctgtcagctc 1501 gtttgacttt ggtctctata tcgatagaca attcaaatgg ctactcccgt aatgccatac 1561 gctggaatgt ggccccgaaa aatcacatat tactgagatg tggaacggtc tcatccaatc 1621 ctgctgccat atggagtttt tatcgcaatg gtgaaaaaat accacaatca gaagtaatac 1681 cagcaaacgg tgccttagtt ctgaacactg tgacagctaa agattcaggc aactatacct 1741 gttcggccat gaatcccata acaagtcaag aggttaaatt gccacaacgc attgatttga 1801 gggtggacta tagtgatcgc accccaccct attttttgac tcagccacca acgcaggtga 1861 cagctagacc gggagaaacg gtggtcttgg aatgccctgg tgtaggttca cccccacccg 1921 tagctgtctg gagttcaccc aatattatca atatgaataa taataatagg acgcggttat 1981 tgccttatgg cctacaaatt gtcgatgtgg tgcctgagga tcaggcacaa tatgtttgcc 2041 gtttggataa tggcatagcc ccggccttgg tacatggcat taaattgaat gttttggaaa 2101 aaccttctat actaaggggt ccagctctta ctttgaccaa tgaaagtgat acactggaac 2161 tggaatgctc agctgctgga aatccttatc cagacattta ttggctgata aatgatgtgg 2221 ataccaccat ggatccggaa atgcaacatg atgggcggcg tttggttata cgacatgtgc 2281 agaaacgtca tgcgggtata gtgcagtgct ttgccaaaaa tgaagtggga gaggttagcg 2341 atgccaatct tttgaaaata aatcccagac aaatccatgg ttcttcagct tcggctgcta 2401 cccctagacc cagatacgaa gatgtgggtg gtggcactaa gaaaggttcc cgcaagaagc 2461 ataagcctac catggtgcca ccttcacgtc ccaatgtcac tcgtttatcc gatgattcgg 2521 ttatgctgcg ttggtatgtg cccaaaaatg atggtctacc catacaattc tttaaagtac 2581 aatatcgcat gctgggcgat gcttcgcgca aaattccccg agaaaattgg caaaccacca 2641 atgatgacat agcctatggc aaacgtaata ccgatattag caagaattat acaacatcag 2701 tgacgggctt gaagccagat agattttatc gttttcgaat tgtggctgtc tataataatg 2761 atgacaacaa ggaaggcaat acatcatcga aattcttctt gcaacgtggt gatgctttgg 2821 atttatctaa atcgaattta cctataccgg aactggcacg cattgaggct ttatccgagt 2881 cggcagtaat gctgcaatgg tcattgccta ctgccgcggc cacatcacat atagatggtt 2941 tctatgctta ctataggccg gcagcatcgg ctggagaata tcaaaaggct acagtagatg 3001 gtatgcatac taggaaattc aaaattgata tgttggaagc aggtacagcc tatgaattta 3061 aattgcaatc atttaatgac atggctgcct cggagtttag tgctatagta caggggaaga 3121 caaaaaaatc agtcaccacc ccagctccta cgctgcccgc tgtggtgcca gccaccaaag 3181 ccaatcaaga ggacaattca atatttcccg tagttgcagg agcagctgga ggtggcatac 3241 tgttattaat agccaccata gcagcttgtt tgtgtatgaa aaagagaaag aattctcaaa 3301 atgaagatga aaataaaccc cagctggatc atattcaagc tgattttgtt acacctcaag 3361 tacaagtttt gggtgtcaac aatcatcata agggcaatca tcgtttaaat ggagtattac 3421 cacgcatgaa tataacccca aatcctttgg cccaagaggc cgataaggct cacttagcat 3481 cccaaggcat acatcatgcg cagccctatt atcagactcc tccaacacct accatgatga 3541 ataagcggga ctatcagcag ccaccaccag tgccaccgca tcaaaacaac aatcatgcgc 3601 ccatgatgaa tcatcatttg ccgcccacgg gtcatcatgc tcccttgaca cctagcatgg 3661 aacagcaaag gcgcaccctg gatcgagggg tgcgcaatat gaattacaat caaagtaatg 3721 gtaatgccat gtcaccgcct tcacatgatg ctgccttgaa tatggatggc atggccacca 3781 gaataccttc actaagaaga acacgtcgta cttcgggagg tagtaccaac aatgcactga 3841 atgccttatc gaataatccc aatggtggct tgggtatacc cattgctgtc agtggcagcc 3901 ctcgagtaca aagatcacct atgcccgccc gagcagcaat gatgaaacag cgttcgcgtt 3961 tgggcagtca caatgacaat atatcttcgg gcagtttaaa cagtattgaa gtgtagtctt 4021 ctaacataaa gtaaaggagt cttcaacaaa aattgtctac gagtatgagt tttagagaag 4081 tgtaagttat aagaacaata gataattttt aatttaataa gacaattagt tataagctat 4141 agaaatcttt atttaagtta attttataag gtaagcctaa gccataccag catttaattg 4201 tgtaaaatcc taaaaaaaaa tatgctgtta tgtcttaggt atcacagatt tagtataagt 4261 tgtatataca tattcctatt aatgtgaggt gatataagaa tttgacagtt tacagcgaag 4321 aaagttcggc tcataacttt tcaatcattt ctcaaaattt tcaaaaaatg cgagtttttc 4381 tttttcattt tgacttaaaa ttgtataaat ttttacttct gtacgctatt tctctcaagg 4441 gggagaaagt cgacttttgt tggaaaatga gtatagatct tatatcgcct ctacacacat 4501 catcgagact tttatatttt gaagatcata tatattttga atattaaaca actcgaatcc 4561 tatttgtaaa agacttaaat cccattagtt agtatatgtc tgaatagagc atgacagtat 4621 gaaaagccca aaagatagtc aatcttatat gactatcttt tgatagcgaa actaaaattc 4681 gaatatttta ttacatacat atatatttca ttttattgca taatagtgct taaacgtatg 4741 ttgatatctt aaattcataa catggcaata tttttaacat accagtataa taggtcacat 4801 tatatttgca cacaaaacat cgatcctttt gatggcaaga tggtgattta accatatggt 4861 ttttatgttg ttgtgtgtga caacctttaa ataattcagc catgggtgtt gtcctatctt 4921 accatattcg gttcgaacat catgaatcct gctgtagctc attattctaa ataacagcga 4981 tataggcttt agaccctcaa tcgcaagatc cgtctataag gcaggtatat ctaagtatgg 5041 tccgatataa accacaccca ggtcctactt atcacagact gcacttttgt acttttgtcc 5101 attattgtta aataacaacc ttttagaata attttactta ttttatgcca aataagtcgt 5161 ttaaattaag cgacgtctgc ccacaattta ggcagctaag ttatgccgca cgcaaattgt 5221 ttacctaaac gcaaatgaat ttacaattac tgacaaggga ctttgctcaa tgaaacgtca 5281 aaatttgctg tgctgccaaa aatcttactg gcccttgggc tactcaaaaa ttattcacca 5341 cacttgacgt catattttga ctatccccac aactttgcta ccattcgaca catagcctta 5401 acaataatgc ctcatgaaat ttatgttgca gtattaacaa atgaaatttg caacactctc 5461 aactggtgtg aatggttgag atgttttcca taactacaat acattagcaa aatttgtcag 5521 tgtaaacata gcattagttc aaaatgttag gataatgaag ttatacatat atatttgcct 5581 ccacaatggg aatttaagac atcaacatat cgtattttga aaaacaaaat attgaggctt 5641 aacattttat tttctaatgc cgaaagcaca ttataaaaaa tgagcacaga aacgaaataa 5701 taaagaaatt ttagaaaaaa aaagttttct tatcgaatgt atataaatta aaatttataa 5761 ctaattttgt atagactctt tagagcttag ttaagttaat ttataattta aaaaagtaat 5821 caaaacacaa attatttttt taagaatcca tgtatgaaac caataacaca aatctattga 5881 tcattgccgt cctgtacatg ttttagttgc acaaacacat atatttgtca ttgagtttaa 5941 taatatttaa ttattttttt ttaataatcg ggtgtgttct agtaactact taaatttttc 6001 ccgaaaaaaa caaattgtaa ttattacata aacaaaaaca aatcttaatt tcttatgatg 6061 aaaaactttt cccagctgta tacatttgtg gtgtagtaat ttttaactta aactccgttt 6121 acactgctca ttaaatccgg attaaaggct ctcgtcagct gattttatta agggaaagca 6181 gtgtaacggg gttttaatat gctttaaaaa tgtttttcat cccgtaactt attcctttag 6241 tattttttct ttttttgtga atacttggtt ataaagccaa aaaatattat ttgtgagctt 6301 gcatacgaaa atattttttt aaaaataaat ttaataaaaa atgtccagac ctcacaattg 6361 atacagctgg gtctgaaagg gtttattcaa caaattctat gatgcaaatt aatgaaatgt 6421 tgacgcttta tttgtgtaat aacaaatagt ttcaacaggg tgaaagcgag agtgaatcct 6481 agaacgcgcc agaatgtttt tagtctatta aaagattatc taattaaaaa actaaggtat 6541 atattatttg ttaataatta attacaaggt tcatgtaaag tgagaagtga aatatttatt 6601 tatttttaat tatgttttcc atcaaaagcg ttagggccaa tttctcaata actggttatt 6661 acgtatggta ttgttaagtt tattttatga tttaatgaat gaattttgtt ttgtgaaaat 6721 tatgtggcat agcagttttt ttttttatta acactaaaaa ttctaatcag caattgagaa 6781 aattgcccta atgtctttaa tataaaagga cacagtatga caaaatgccc tctggtaatg 6841 caagatatga tttgaccaga tatattttat tataaaatct tcataaaata taccgttttt 6901 aaaaattcta accttttggt gaaacccatt gttttaagaa cattttttac tgttacgtat 6961 gtaatgtaca aattttcgaa gatttttttt gtcatcttgt tctttaagtt tatttttaaa 7021 ataccatgct tcc