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LOCUS XM_059366287 7015 bp mRNA linear INV 02-SEP-2023 (LOC106081410), transcript variant X3, mRNA. ACCESSION XM_059366287 VERSION XM_059366287.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7015 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7015 /gene="LOC106081410" /note="interference hedgehog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106081410" CDS 542..3997 /gene="LOC106081410" /codon_start=1 /product="interference hedgehog isoform X1" /protein_id="XP_059222270.1" /db_xref="GeneID:106081410" /translation="MLPTTGTATTTAAPAPAPPTASTTTTLFHKNTCSSLLPPFVRTS LCSSSGGFFAFSPLSVIVKSVIFFLAFATSACLASQPPTLGVHFVRSPESAVAPKGDE VVFECEMNLGPERLEWKFRHSSNRTADGSRFIYLSKESGYNITNDEKNSKLRFVVQPE TLGDYQCVAWYGSAAIASLSARLTLVSISIDNSNGYSRNAIRWNVAPKNHILLRCGTV SSNPAAIWSFYRNGEKIPQSEVIPANGALVLNTVTAKDSGNYTCSAMNPITSQEVKLP QRIDLRVDYSDRTPPYFLTQPPTQVTARPGETVVLECPGVGSPPPVAVWSSPNIINMN NNNRTRLLPYGLQIVDVVPEDQAQYVCRLDNGIAPALVHGIKLNVLEKPSILRGPALT LTNESDTLELECSAAGNPYPDIYWLINDVDTTMDPEMQHDGRRLVIRHVQKRHAGIVQ CFAKNEVGEVSDANLLKINPRQIHGSSASAATPRPRYEDVGGGTKKGSRKKHKPTMVP PSRPNVTRLSDDSVMLRWYVPKNDGLPIQFFKVQYRMLGDASRKIPRENWQTTNDDIA YGKRNTDISKNYTTSVTGLKPDRFYRFRIVAVYNNDDNKEGNTSSKFFLQRGDALDLS KSNLPIPELARIEALSESAVMLQWSLPTAAATSHIDGFYAYYRPAASAGEYQKATVDG MHTRKFKIDMLEAGTAYEFKLQSFNDMAASEFSAIVQGKTKKSVTTPAPTLPAVVPAT KANQEDNSIFPVVAGAAGGGILLLIATIAACLCMKKRKNSQNEDENKPQLDHIQADFV TPQVQVLGVNNHHKGNHRLNGVLPRMNITPNPLAQEADKNRNVMELRFMSNTNSASSP ANSNSNTNSNNSCHNSQEKLNSYNAEEAPHTPPQRSTSSCETLEAVDGINSPLTPNGL DAESPLSKPLPPLPSKNTNKLANHTTPSSLKNNTASLSKSNHQSKSSTNNLNNSQAHL ASQGIHHAQPYYQTPPTPTMMNKRDYQQPPPVPPHQNNNHAPMMNHHLPPTGHHAPLT PSMEQQRRTLDRGVRNMNYNQSNGNAMSPPSHDAALNMDGMATRIPSLRRTRRTSGGS TNNALNALSNNPNGGLGIPIAVSGSPRVQRSPMPARAAMMKQRSRLGSHNDNISSGSL NSIEV" ORIGIN 1 tatattacgg aatttgttta taataaaaat tccccaacat cagcaagtga ggagaaaaaa 61 aatacatagg aaaaaaaaac tcgcgctccc ccttgtgcgt atgctcacat caattctcac 121 ttgccatagt cagcaagcta gcgggcgcgc gcattgcttg tgccattcag tgaatattga 181 atagatttta tgaatgaata aagaataact gtggcggtga cgacaaacaa caacgaacga 241 gcgaccggct agcagaaata ttgttttgat accagatttc cttggcaaac aaaaactcta 301 agaaataaaa gtatccaaca atataatcaa aaggaagtta caaatttaat ttctaaaaca 361 aaagatgtgc atcctgttaa tgaactttac cagttgtaaa tgttaattaa agcatcttga 421 aaataatttc tactaaagtt ttaaagttca atgtaattgg aatttaaagc agcgtagaag 481 aaagaagtca acataaaatt tttgcaaatt ttatgcgcca acaacaaaag tgacaagcac 541 aatgttgccg acaacaggaa cagcaacaac cacagcagca ccagcaccag caccgccaac 601 tgcttctacg acgacaacat tatttcataa aaacacctgc tcatcattgc tgccgccttt 661 tgttcgaacc tcattatgct catcttccgg cggctttttt gccttctcgc cactatctgt 721 catcgttaaa tctgtgattt tctttttggc ctttgcaaca agtgcctgcc ttgcctctca 781 accccccaca ttaggggtcc actttgtgcg atctcctgag tcagcggtgg cacccaaggg 841 agatgaggtg gtctttgagt gtgaaatgaa tttaggtccc gaacgtttag agtggaaatt 901 tcgtcactcc agcaatcgaa cggcagatgg aagtcgattt atttatctat ccaaggagag 961 tggctacaac ataaccaacg atgaaaagaa ttccaaatta cggttcgtcg tgcaacccga 1021 gaccttgggc gactatcaat gtgtagcctg gtatggctct gcggccattg catctctgtc 1081 agctcgtttg actttggtct ctatatcgat agacaattca aatggctact cccgtaatgc 1141 catacgctgg aatgtggccc cgaaaaatca catattactg agatgtggaa cggtctcatc 1201 caatcctgct gccatatgga gtttttatcg caatggtgaa aaaataccac aatcagaagt 1261 aataccagca aacggtgcct tagttctgaa cactgtgaca gctaaagatt caggcaacta 1321 tacctgttcg gccatgaatc ccataacaag tcaagaggtt aaattgccac aacgcattga 1381 tttgagggtg gactatagtg atcgcacccc accctatttt ttgactcagc caccaacgca 1441 ggtgacagct agaccgggag aaacggtggt cttggaatgc cctggtgtag gttcaccccc 1501 acccgtagct gtctggagtt cacccaatat tatcaatatg aataataata ataggacgcg 1561 gttattgcct tatggcctac aaattgtcga tgtggtgcct gaggatcagg cacaatatgt 1621 ttgccgtttg gataatggca tagccccggc cttggtacat ggcattaaat tgaatgtttt 1681 ggaaaaacct tctatactaa ggggtccagc tcttactttg accaatgaaa gtgatacact 1741 ggaactggaa tgctcagctg ctggaaatcc ttatccagac atttattggc tgataaatga 1801 tgtggatacc accatggatc cggaaatgca acatgatggg cggcgtttgg ttatacgaca 1861 tgtgcagaaa cgtcatgcgg gtatagtgca gtgctttgcc aaaaatgaag tgggagaggt 1921 tagcgatgcc aatcttttga aaataaatcc cagacaaatc catggttctt cagcttcggc 1981 tgctacccct agacccagat acgaagatgt gggtggtggc actaagaaag gttcccgcaa 2041 gaagcataag cctaccatgg tgccaccttc acgtcccaat gtcactcgtt tatccgatga 2101 ttcggttatg ctgcgttggt atgtgcccaa aaatgatggt ctacccatac aattctttaa 2161 agtacaatat cgcatgctgg gcgatgcttc gcgcaaaatt ccccgagaaa attggcaaac 2221 caccaatgat gacatagcct atggcaaacg taataccgat attagcaaga attatacaac 2281 atcagtgacg ggcttgaagc cagatagatt ttatcgtttt cgaattgtgg ctgtctataa 2341 taatgatgac aacaaggaag gcaatacatc atcgaaattc ttcttgcaac gtggtgatgc 2401 tttggattta tctaaatcga atttacctat accggaactg gcacgcattg aggctttatc 2461 cgagtcggca gtaatgctgc aatggtcatt gcctactgcc gcggccacat cacatataga 2521 tggtttctat gcttactata ggccggcagc atcggctgga gaatatcaaa aggctacagt 2581 agatggtatg catactagga aattcaaaat tgatatgttg gaagcaggta cagcctatga 2641 atttaaattg caatcattta atgacatggc tgcctcggag tttagtgcta tagtacaggg 2701 gaagacaaaa aaatcagtca ccaccccagc tcctacgctg cccgctgtgg tgccagccac 2761 caaagccaat caagaggaca attcaatatt tcccgtagtt gcaggagcag ctggaggtgg 2821 catactgtta ttaatagcca ccatagcagc ttgtttgtgt atgaaaaaga gaaagaattc 2881 tcaaaatgaa gatgaaaata aaccccagct ggatcatatt caagctgatt ttgttacacc 2941 tcaagtacaa gttttgggtg tcaacaatca tcataagggc aatcatcgtt taaatggagt 3001 attaccacgc atgaatataa ccccaaatcc tttggcccaa gaggccgata agaatcgtaa 3061 tgtcatggaa ttgcgcttta tgagcaacac caacagcgcc agtagtccgg ccaacagtaa 3121 cagtaataca aacagcaata acagttgcca caacagtcag gagaaactaa atagttataa 3181 tgccgaagaa gccccacata caccacctca acgttccacc tcatcgtgtg aaacattaga 3241 ggctgtagac ggcataaata gtcctctaac acccaatggt ctagatgccg aatcgccgct 3301 ctctaaacct ttgccaccat tgccaagcaa aaataccaac aaattagcaa atcatacaac 3361 tccttcttcg ttaaagaaca atacagcatc gctttcaaaa agtaatcatc aaagtaaatc 3421 atctactaat aatctaaata attcacaggc tcacttagca tcccaaggca tacatcatgc 3481 gcagccctat tatcagactc ctccaacacc taccatgatg aataagcggg actatcagca 3541 gccaccacca gtgccaccgc atcaaaacaa caatcatgcg cccatgatga atcatcattt 3601 gccgcccacg ggtcatcatg ctcccttgac acctagcatg gaacagcaaa ggcgcaccct 3661 ggatcgaggg gtgcgcaata tgaattacaa tcaaagtaat ggtaatgcca tgtcaccgcc 3721 ttcacatgat gctgccttga atatggatgg catggccacc agaatacctt cactaagaag 3781 aacacgtcgt acttcgggag gtagtaccaa caatgcactg aatgccttat cgaataatcc 3841 caatggtggc ttgggtatac ccattgctgt cagtggcagc cctcgagtac aaagatcacc 3901 tatgcccgcc cgagcagcaa tgatgaaaca gcgttcgcgt ttgggcagtc acaatgacaa 3961 tatatcttcg ggcagtttaa acagtattga agtgtagtct tctaacataa agtaaaggag 4021 tcttcaacaa aaattgtcta cgagtatgag ttttagagaa gtgtaagtta taagaacaat 4081 agataatttt taatttaata agacaattag ttataagcta tagaaatctt tatttaagtt 4141 aattttataa ggtaagccta agccatacca gcatttaatt gtgtaaaatc ctaaaaaaaa 4201 atatgctgtt atgtcttagg tatcacagat ttagtataag ttgtatatac atattcctat 4261 taatgtgagg tgatataaga atttgacagt ttacagcgaa gaaagttcgg ctcataactt 4321 ttcaatcatt tctcaaaatt ttcaaaaaat gcgagttttt ctttttcatt ttgacttaaa 4381 attgtataaa tttttacttc tgtacgctat ttctctcaag ggggagaaag tcgacttttg 4441 ttggaaaatg agtatagatc ttatatcgcc tctacacaca tcatcgagac ttttatattt 4501 tgaagatcat atatattttg aatattaaac aactcgaatc ctatttgtaa aagacttaaa 4561 tcccattagt tagtatatgt ctgaatagag catgacagta tgaaaagccc aaaagatagt 4621 caatcttata tgactatctt ttgatagcga aactaaaatt cgaatatttt attacataca 4681 tatatatttc attttattgc ataatagtgc ttaaacgtat gttgatatct taaattcata 4741 acatggcaat atttttaaca taccagtata ataggtcaca ttatatttgc acacaaaaca 4801 tcgatccttt tgatggcaag atggtgattt aaccatatgg tttttatgtt gttgtgtgtg 4861 acaaccttta aataattcag ccatgggtgt tgtcctatct taccatattc ggttcgaaca 4921 tcatgaatcc tgctgtagct cattattcta aataacagcg atataggctt tagaccctca 4981 atcgcaagat ccgtctataa ggcaggtata tctaagtatg gtccgatata aaccacaccc 5041 aggtcctact tatcacagac tgcacttttg tacttttgtc cattattgtt aaataacaac 5101 cttttagaat aattttactt attttatgcc aaataagtcg tttaaattaa gcgacgtctg 5161 cccacaattt aggcagctaa gttatgccgc acgcaaattg tttacctaaa cgcaaatgaa 5221 tttacaatta ctgacaaggg actttgctca atgaaacgtc aaaatttgct gtgctgccaa 5281 aaatcttact ggcccttggg ctactcaaaa attattcacc acacttgacg tcatattttg 5341 actatcccca caactttgct accattcgac acatagcctt aacaataatg cctcatgaaa 5401 tttatgttgc agtattaaca aatgaaattt gcaacactct caactggtgt gaatggttga 5461 gatgttttcc ataactacaa tacattagca aaatttgtca gtgtaaacat agcattagtt 5521 caaaatgtta ggataatgaa gttatacata tatatttgcc tccacaatgg gaatttaaga 5581 catcaacata tcgtattttg aaaaacaaaa tattgaggct taacatttta ttttctaatg 5641 ccgaaagcac attataaaaa atgagcacag aaacgaaata ataaagaaat tttagaaaaa 5701 aaaagttttc ttatcgaatg tatataaatt aaaatttata actaattttg tatagactct 5761 ttagagctta gttaagttaa tttataattt aaaaaagtaa tcaaaacaca aattattttt 5821 ttaagaatcc atgtatgaaa ccaataacac aaatctattg atcattgccg tcctgtacat 5881 gttttagttg cacaaacaca tatatttgtc attgagttta ataatattta attatttttt 5941 tttaataatc gggtgtgttc tagtaactac ttaaattttt cccgaaaaaa acaaattgta 6001 attattacat aaacaaaaac aaatcttaat ttcttatgat gaaaaacttt tcccagctgt 6061 atacatttgt ggtgtagtaa tttttaactt aaactccgtt tacactgctc attaaatccg 6121 gattaaaggc tctcgtcagc tgattttatt aagggaaagc agtgtaacgg ggttttaata 6181 tgctttaaaa atgtttttca tcccgtaact tattccttta gtattttttc tttttttgtg 6241 aatacttggt tataaagcca aaaaatatta tttgtgagct tgcatacgaa aatatttttt 6301 taaaaataaa tttaataaaa aatgtccaga cctcacaatt gatacagctg ggtctgaaag 6361 ggtttattca acaaattcta tgatgcaaat taatgaaatg ttgacgcttt atttgtgtaa 6421 taacaaatag tttcaacagg gtgaaagcga gagtgaatcc tagaacgcgc cagaatgttt 6481 ttagtctatt aaaagattat ctaattaaaa aactaaggta tatattattt gttaataatt 6541 aattacaagg ttcatgtaaa gtgagaagtg aaatatttat ttatttttaa ttatgttttc 6601 catcaaaagc gttagggcca atttctcaat aactggttat tacgtatggt attgttaagt 6661 ttattttatg atttaatgaa tgaattttgt tttgtgaaaa ttatgtggca tagcagtttt 6721 tttttttatt aacactaaaa attctaatca gcaattgaga aaattgccct aatgtcttta 6781 atataaaagg acacagtatg acaaaatgcc ctctggtaat gcaagatatg atttgaccag 6841 atatatttta ttataaaatc ttcataaaat ataccgtttt taaaaattct aaccttttgg 6901 tgaaacccat tgttttaaga acatttttta ctgttacgta tgtaatgtac aaattttcga 6961 agattttttt tgtcatcttg ttctttaagt ttatttttaa aataccatgc ttcct