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LOCUS XM_059366286 7185 bp mRNA linear INV 02-SEP-2023 (LOC106081410), transcript variant X2, mRNA. ACCESSION XM_059366286 VERSION XM_059366286.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7185 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7185 /gene="LOC106081410" /note="interference hedgehog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106081410" CDS 712..4167 /gene="LOC106081410" /codon_start=1 /product="interference hedgehog isoform X1" /protein_id="XP_059222269.1" /db_xref="GeneID:106081410" /translation="MLPTTGTATTTAAPAPAPPTASTTTTLFHKNTCSSLLPPFVRTS LCSSSGGFFAFSPLSVIVKSVIFFLAFATSACLASQPPTLGVHFVRSPESAVAPKGDE VVFECEMNLGPERLEWKFRHSSNRTADGSRFIYLSKESGYNITNDEKNSKLRFVVQPE TLGDYQCVAWYGSAAIASLSARLTLVSISIDNSNGYSRNAIRWNVAPKNHILLRCGTV SSNPAAIWSFYRNGEKIPQSEVIPANGALVLNTVTAKDSGNYTCSAMNPITSQEVKLP QRIDLRVDYSDRTPPYFLTQPPTQVTARPGETVVLECPGVGSPPPVAVWSSPNIINMN NNNRTRLLPYGLQIVDVVPEDQAQYVCRLDNGIAPALVHGIKLNVLEKPSILRGPALT LTNESDTLELECSAAGNPYPDIYWLINDVDTTMDPEMQHDGRRLVIRHVQKRHAGIVQ CFAKNEVGEVSDANLLKINPRQIHGSSASAATPRPRYEDVGGGTKKGSRKKHKPTMVP PSRPNVTRLSDDSVMLRWYVPKNDGLPIQFFKVQYRMLGDASRKIPRENWQTTNDDIA YGKRNTDISKNYTTSVTGLKPDRFYRFRIVAVYNNDDNKEGNTSSKFFLQRGDALDLS KSNLPIPELARIEALSESAVMLQWSLPTAAATSHIDGFYAYYRPAASAGEYQKATVDG MHTRKFKIDMLEAGTAYEFKLQSFNDMAASEFSAIVQGKTKKSVTTPAPTLPAVVPAT KANQEDNSIFPVVAGAAGGGILLLIATIAACLCMKKRKNSQNEDENKPQLDHIQADFV TPQVQVLGVNNHHKGNHRLNGVLPRMNITPNPLAQEADKNRNVMELRFMSNTNSASSP ANSNSNTNSNNSCHNSQEKLNSYNAEEAPHTPPQRSTSSCETLEAVDGINSPLTPNGL DAESPLSKPLPPLPSKNTNKLANHTTPSSLKNNTASLSKSNHQSKSSTNNLNNSQAHL ASQGIHHAQPYYQTPPTPTMMNKRDYQQPPPVPPHQNNNHAPMMNHHLPPTGHHAPLT PSMEQQRRTLDRGVRNMNYNQSNGNAMSPPSHDAALNMDGMATRIPSLRRTRRTSGGS TNNALNALSNNPNGGLGIPIAVSGSPRVQRSPMPARAAMMKQRSRLGSHNDNISSGSL NSIEV" ORIGIN 1 gtgttagcac gttggaaatt ggtgcggcgg gatattagtt gttgttgttt tacgtaaaaa 61 tccagtcata cgcattgtgg aaaggaagat ggcattttgc aataaaagaa ataaactata 121 aggaagtgct taaaatacta catgcaaata aactagcaaa gcggtagtgc aagtgattga 181 ttcttgggaa aaaatagtga agaattgata cagcaagtga ggagaaaaaa aatacatagg 241 aaaaaaaaac tcgcgctccc ccttgtgcgt atgctcacat caattctcac ttgccatagt 301 cagcaagcta gcgggcgcgc gcattgcttg tgccattcag tgaatattga atagatttta 361 tgaatgaata aagaataact gtggcggtga cgacaaacaa caacgaacga gcgaccggct 421 agcagaaata ttgttttgat accagatttc cttggcaaac aaaaactcta agaaataaaa 481 gtatccaaca atataatcaa aaggaagtta caaatttaat ttctaaaaca aaagatgtgc 541 atcctgttaa tgaactttac cagttgtaaa tgttaattaa agcatcttga aaataatttc 601 tactaaagtt ttaaagttca atgtaattgg aatttaaagc agcgtagaag aaagaagtca 661 acataaaatt tttgcaaatt ttatgcgcca acaacaaaag tgacaagcac aatgttgccg 721 acaacaggaa cagcaacaac cacagcagca ccagcaccag caccgccaac tgcttctacg 781 acgacaacat tatttcataa aaacacctgc tcatcattgc tgccgccttt tgttcgaacc 841 tcattatgct catcttccgg cggctttttt gccttctcgc cactatctgt catcgttaaa 901 tctgtgattt tctttttggc ctttgcaaca agtgcctgcc ttgcctctca accccccaca 961 ttaggggtcc actttgtgcg atctcctgag tcagcggtgg cacccaaggg agatgaggtg 1021 gtctttgagt gtgaaatgaa tttaggtccc gaacgtttag agtggaaatt tcgtcactcc 1081 agcaatcgaa cggcagatgg aagtcgattt atttatctat ccaaggagag tggctacaac 1141 ataaccaacg atgaaaagaa ttccaaatta cggttcgtcg tgcaacccga gaccttgggc 1201 gactatcaat gtgtagcctg gtatggctct gcggccattg catctctgtc agctcgtttg 1261 actttggtct ctatatcgat agacaattca aatggctact cccgtaatgc catacgctgg 1321 aatgtggccc cgaaaaatca catattactg agatgtggaa cggtctcatc caatcctgct 1381 gccatatgga gtttttatcg caatggtgaa aaaataccac aatcagaagt aataccagca 1441 aacggtgcct tagttctgaa cactgtgaca gctaaagatt caggcaacta tacctgttcg 1501 gccatgaatc ccataacaag tcaagaggtt aaattgccac aacgcattga tttgagggtg 1561 gactatagtg atcgcacccc accctatttt ttgactcagc caccaacgca ggtgacagct 1621 agaccgggag aaacggtggt cttggaatgc cctggtgtag gttcaccccc acccgtagct 1681 gtctggagtt cacccaatat tatcaatatg aataataata ataggacgcg gttattgcct 1741 tatggcctac aaattgtcga tgtggtgcct gaggatcagg cacaatatgt ttgccgtttg 1801 gataatggca tagccccggc cttggtacat ggcattaaat tgaatgtttt ggaaaaacct 1861 tctatactaa ggggtccagc tcttactttg accaatgaaa gtgatacact ggaactggaa 1921 tgctcagctg ctggaaatcc ttatccagac atttattggc tgataaatga tgtggatacc 1981 accatggatc cggaaatgca acatgatggg cggcgtttgg ttatacgaca tgtgcagaaa 2041 cgtcatgcgg gtatagtgca gtgctttgcc aaaaatgaag tgggagaggt tagcgatgcc 2101 aatcttttga aaataaatcc cagacaaatc catggttctt cagcttcggc tgctacccct 2161 agacccagat acgaagatgt gggtggtggc actaagaaag gttcccgcaa gaagcataag 2221 cctaccatgg tgccaccttc acgtcccaat gtcactcgtt tatccgatga ttcggttatg 2281 ctgcgttggt atgtgcccaa aaatgatggt ctacccatac aattctttaa agtacaatat 2341 cgcatgctgg gcgatgcttc gcgcaaaatt ccccgagaaa attggcaaac caccaatgat 2401 gacatagcct atggcaaacg taataccgat attagcaaga attatacaac atcagtgacg 2461 ggcttgaagc cagatagatt ttatcgtttt cgaattgtgg ctgtctataa taatgatgac 2521 aacaaggaag gcaatacatc atcgaaattc ttcttgcaac gtggtgatgc tttggattta 2581 tctaaatcga atttacctat accggaactg gcacgcattg aggctttatc cgagtcggca 2641 gtaatgctgc aatggtcatt gcctactgcc gcggccacat cacatataga tggtttctat 2701 gcttactata ggccggcagc atcggctgga gaatatcaaa aggctacagt agatggtatg 2761 catactagga aattcaaaat tgatatgttg gaagcaggta cagcctatga atttaaattg 2821 caatcattta atgacatggc tgcctcggag tttagtgcta tagtacaggg gaagacaaaa 2881 aaatcagtca ccaccccagc tcctacgctg cccgctgtgg tgccagccac caaagccaat 2941 caagaggaca attcaatatt tcccgtagtt gcaggagcag ctggaggtgg catactgtta 3001 ttaatagcca ccatagcagc ttgtttgtgt atgaaaaaga gaaagaattc tcaaaatgaa 3061 gatgaaaata aaccccagct ggatcatatt caagctgatt ttgttacacc tcaagtacaa 3121 gttttgggtg tcaacaatca tcataagggc aatcatcgtt taaatggagt attaccacgc 3181 atgaatataa ccccaaatcc tttggcccaa gaggccgata agaatcgtaa tgtcatggaa 3241 ttgcgcttta tgagcaacac caacagcgcc agtagtccgg ccaacagtaa cagtaataca 3301 aacagcaata acagttgcca caacagtcag gagaaactaa atagttataa tgccgaagaa 3361 gccccacata caccacctca acgttccacc tcatcgtgtg aaacattaga ggctgtagac 3421 ggcataaata gtcctctaac acccaatggt ctagatgccg aatcgccgct ctctaaacct 3481 ttgccaccat tgccaagcaa aaataccaac aaattagcaa atcatacaac tccttcttcg 3541 ttaaagaaca atacagcatc gctttcaaaa agtaatcatc aaagtaaatc atctactaat 3601 aatctaaata attcacaggc tcacttagca tcccaaggca tacatcatgc gcagccctat 3661 tatcagactc ctccaacacc taccatgatg aataagcggg actatcagca gccaccacca 3721 gtgccaccgc atcaaaacaa caatcatgcg cccatgatga atcatcattt gccgcccacg 3781 ggtcatcatg ctcccttgac acctagcatg gaacagcaaa ggcgcaccct ggatcgaggg 3841 gtgcgcaata tgaattacaa tcaaagtaat ggtaatgcca tgtcaccgcc ttcacatgat 3901 gctgccttga atatggatgg catggccacc agaatacctt cactaagaag aacacgtcgt 3961 acttcgggag gtagtaccaa caatgcactg aatgccttat cgaataatcc caatggtggc 4021 ttgggtatac ccattgctgt cagtggcagc cctcgagtac aaagatcacc tatgcccgcc 4081 cgagcagcaa tgatgaaaca gcgttcgcgt ttgggcagtc acaatgacaa tatatcttcg 4141 ggcagtttaa acagtattga agtgtagtct tctaacataa agtaaaggag tcttcaacaa 4201 aaattgtcta cgagtatgag ttttagagaa gtgtaagtta taagaacaat agataatttt 4261 taatttaata agacaattag ttataagcta tagaaatctt tatttaagtt aattttataa 4321 ggtaagccta agccatacca gcatttaatt gtgtaaaatc ctaaaaaaaa atatgctgtt 4381 atgtcttagg tatcacagat ttagtataag ttgtatatac atattcctat taatgtgagg 4441 tgatataaga atttgacagt ttacagcgaa gaaagttcgg ctcataactt ttcaatcatt 4501 tctcaaaatt ttcaaaaaat gcgagttttt ctttttcatt ttgacttaaa attgtataaa 4561 tttttacttc tgtacgctat ttctctcaag ggggagaaag tcgacttttg ttggaaaatg 4621 agtatagatc ttatatcgcc tctacacaca tcatcgagac ttttatattt tgaagatcat 4681 atatattttg aatattaaac aactcgaatc ctatttgtaa aagacttaaa tcccattagt 4741 tagtatatgt ctgaatagag catgacagta tgaaaagccc aaaagatagt caatcttata 4801 tgactatctt ttgatagcga aactaaaatt cgaatatttt attacataca tatatatttc 4861 attttattgc ataatagtgc ttaaacgtat gttgatatct taaattcata acatggcaat 4921 atttttaaca taccagtata ataggtcaca ttatatttgc acacaaaaca tcgatccttt 4981 tgatggcaag atggtgattt aaccatatgg tttttatgtt gttgtgtgtg acaaccttta 5041 aataattcag ccatgggtgt tgtcctatct taccatattc ggttcgaaca tcatgaatcc 5101 tgctgtagct cattattcta aataacagcg atataggctt tagaccctca atcgcaagat 5161 ccgtctataa ggcaggtata tctaagtatg gtccgatata aaccacaccc aggtcctact 5221 tatcacagac tgcacttttg tacttttgtc cattattgtt aaataacaac cttttagaat 5281 aattttactt attttatgcc aaataagtcg tttaaattaa gcgacgtctg cccacaattt 5341 aggcagctaa gttatgccgc acgcaaattg tttacctaaa cgcaaatgaa tttacaatta 5401 ctgacaaggg actttgctca atgaaacgtc aaaatttgct gtgctgccaa aaatcttact 5461 ggcccttggg ctactcaaaa attattcacc acacttgacg tcatattttg actatcccca 5521 caactttgct accattcgac acatagcctt aacaataatg cctcatgaaa tttatgttgc 5581 agtattaaca aatgaaattt gcaacactct caactggtgt gaatggttga gatgttttcc 5641 ataactacaa tacattagca aaatttgtca gtgtaaacat agcattagtt caaaatgtta 5701 ggataatgaa gttatacata tatatttgcc tccacaatgg gaatttaaga catcaacata 5761 tcgtattttg aaaaacaaaa tattgaggct taacatttta ttttctaatg ccgaaagcac 5821 attataaaaa atgagcacag aaacgaaata ataaagaaat tttagaaaaa aaaagttttc 5881 ttatcgaatg tatataaatt aaaatttata actaattttg tatagactct ttagagctta 5941 gttaagttaa tttataattt aaaaaagtaa tcaaaacaca aattattttt ttaagaatcc 6001 atgtatgaaa ccaataacac aaatctattg atcattgccg tcctgtacat gttttagttg 6061 cacaaacaca tatatttgtc attgagttta ataatattta attatttttt tttaataatc 6121 gggtgtgttc tagtaactac ttaaattttt cccgaaaaaa acaaattgta attattacat 6181 aaacaaaaac aaatcttaat ttcttatgat gaaaaacttt tcccagctgt atacatttgt 6241 ggtgtagtaa tttttaactt aaactccgtt tacactgctc attaaatccg gattaaaggc 6301 tctcgtcagc tgattttatt aagggaaagc agtgtaacgg ggttttaata tgctttaaaa 6361 atgtttttca tcccgtaact tattccttta gtattttttc tttttttgtg aatacttggt 6421 tataaagcca aaaaatatta tttgtgagct tgcatacgaa aatatttttt taaaaataaa 6481 tttaataaaa aatgtccaga cctcacaatt gatacagctg ggtctgaaag ggtttattca 6541 acaaattcta tgatgcaaat taatgaaatg ttgacgcttt atttgtgtaa taacaaatag 6601 tttcaacagg gtgaaagcga gagtgaatcc tagaacgcgc cagaatgttt ttagtctatt 6661 aaaagattat ctaattaaaa aactaaggta tatattattt gttaataatt aattacaagg 6721 ttcatgtaaa gtgagaagtg aaatatttat ttatttttaa ttatgttttc catcaaaagc 6781 gttagggcca atttctcaat aactggttat tacgtatggt attgttaagt ttattttatg 6841 atttaatgaa tgaattttgt tttgtgaaaa ttatgtggca tagcagtttt tttttttatt 6901 aacactaaaa attctaatca gcaattgaga aaattgccct aatgtcttta atataaaagg 6961 acacagtatg acaaaatgcc ctctggtaat gcaagatatg atttgaccag atatatttta 7021 ttataaaatc ttcataaaat ataccgtttt taaaaattct aaccttttgg tgaaacccat 7081 tgttttaaga acatttttta ctgttacgta tgtaatgtac aaattttcga agattttttt 7141 tgtcatcttg ttctttaagt ttatttttaa aataccatgc ttcct