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LOCUS XM_059366285 7430 bp mRNA linear INV 02-SEP-2023 (LOC106081410), transcript variant X1, mRNA. ACCESSION XM_059366285 VERSION XM_059366285.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7430 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7430 /gene="LOC106081410" /note="interference hedgehog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106081410" CDS 957..4412 /gene="LOC106081410" /codon_start=1 /product="interference hedgehog isoform X1" /protein_id="XP_059222268.1" /db_xref="GeneID:106081410" /translation="MLPTTGTATTTAAPAPAPPTASTTTTLFHKNTCSSLLPPFVRTS LCSSSGGFFAFSPLSVIVKSVIFFLAFATSACLASQPPTLGVHFVRSPESAVAPKGDE VVFECEMNLGPERLEWKFRHSSNRTADGSRFIYLSKESGYNITNDEKNSKLRFVVQPE TLGDYQCVAWYGSAAIASLSARLTLVSISIDNSNGYSRNAIRWNVAPKNHILLRCGTV SSNPAAIWSFYRNGEKIPQSEVIPANGALVLNTVTAKDSGNYTCSAMNPITSQEVKLP QRIDLRVDYSDRTPPYFLTQPPTQVTARPGETVVLECPGVGSPPPVAVWSSPNIINMN NNNRTRLLPYGLQIVDVVPEDQAQYVCRLDNGIAPALVHGIKLNVLEKPSILRGPALT LTNESDTLELECSAAGNPYPDIYWLINDVDTTMDPEMQHDGRRLVIRHVQKRHAGIVQ CFAKNEVGEVSDANLLKINPRQIHGSSASAATPRPRYEDVGGGTKKGSRKKHKPTMVP PSRPNVTRLSDDSVMLRWYVPKNDGLPIQFFKVQYRMLGDASRKIPRENWQTTNDDIA YGKRNTDISKNYTTSVTGLKPDRFYRFRIVAVYNNDDNKEGNTSSKFFLQRGDALDLS KSNLPIPELARIEALSESAVMLQWSLPTAAATSHIDGFYAYYRPAASAGEYQKATVDG MHTRKFKIDMLEAGTAYEFKLQSFNDMAASEFSAIVQGKTKKSVTTPAPTLPAVVPAT KANQEDNSIFPVVAGAAGGGILLLIATIAACLCMKKRKNSQNEDENKPQLDHIQADFV TPQVQVLGVNNHHKGNHRLNGVLPRMNITPNPLAQEADKNRNVMELRFMSNTNSASSP ANSNSNTNSNNSCHNSQEKLNSYNAEEAPHTPPQRSTSSCETLEAVDGINSPLTPNGL DAESPLSKPLPPLPSKNTNKLANHTTPSSLKNNTASLSKSNHQSKSSTNNLNNSQAHL ASQGIHHAQPYYQTPPTPTMMNKRDYQQPPPVPPHQNNNHAPMMNHHLPPTGHHAPLT PSMEQQRRTLDRGVRNMNYNQSNGNAMSPPSHDAALNMDGMATRIPSLRRTRRTSGGS TNNALNALSNNPNGGLGIPIAVSGSPRVQRSPMPARAAMMKQRSRLGSHNDNISSGSL NSIEV" ORIGIN 1 gtgttagcac gttggaaatt ggtgcggcgg gatattagtt gttgttgttt tacgtaaaaa 61 tccagtcata cgcattgtgg aaaggaagat ggcattttgc aataaaagaa ataaactata 121 aggaagtgct taaaatacta catgcaaata aactagcaaa gcggtagtgc aagtgattga 181 ttcttgggaa aaaatagtga agaattgata caggtgttaa acgaaagcag aaatagaatt 241 agaaaataaa atataaaccg aatgctattt gaaatctttt aaaagttaac taagttcaaa 301 tttttgaagc tttccgtggg tgtctgtttt ataaaaaagt ttaaacaaat tgttttcata 361 caattaatta aaacattaaa atgttttaaa actaaatttg tgttaaaaac gtgatcgacc 421 gtcttgcttc tgtcaatctc ttgtgtttct ggcatttgca agtgaggaga aaaaaaatac 481 ataggaaaaa aaaactcgcg ctcccccttg tgcgtatgct cacatcaatt ctcacttgcc 541 atagtcagca agctagcggg cgcgcgcatt gcttgtgcca ttcagtgaat attgaataga 601 ttttatgaat gaataaagaa taactgtggc ggtgacgaca aacaacaacg aacgagcgac 661 cggctagcag aaatattgtt ttgataccag atttccttgg caaacaaaaa ctctaagaaa 721 taaaagtatc caacaatata atcaaaagga agttacaaat ttaatttcta aaacaaaaga 781 tgtgcatcct gttaatgaac tttaccagtt gtaaatgtta attaaagcat cttgaaaata 841 atttctacta aagttttaaa gttcaatgta attggaattt aaagcagcgt agaagaaaga 901 agtcaacata aaatttttgc aaattttatg cgccaacaac aaaagtgaca agcacaatgt 961 tgccgacaac aggaacagca acaaccacag cagcaccagc accagcaccg ccaactgctt 1021 ctacgacgac aacattattt cataaaaaca cctgctcatc attgctgccg ccttttgttc 1081 gaacctcatt atgctcatct tccggcggct tttttgcctt ctcgccacta tctgtcatcg 1141 ttaaatctgt gattttcttt ttggcctttg caacaagtgc ctgccttgcc tctcaacccc 1201 ccacattagg ggtccacttt gtgcgatctc ctgagtcagc ggtggcaccc aagggagatg 1261 aggtggtctt tgagtgtgaa atgaatttag gtcccgaacg tttagagtgg aaatttcgtc 1321 actccagcaa tcgaacggca gatggaagtc gatttattta tctatccaag gagagtggct 1381 acaacataac caacgatgaa aagaattcca aattacggtt cgtcgtgcaa cccgagacct 1441 tgggcgacta tcaatgtgta gcctggtatg gctctgcggc cattgcatct ctgtcagctc 1501 gtttgacttt ggtctctata tcgatagaca attcaaatgg ctactcccgt aatgccatac 1561 gctggaatgt ggccccgaaa aatcacatat tactgagatg tggaacggtc tcatccaatc 1621 ctgctgccat atggagtttt tatcgcaatg gtgaaaaaat accacaatca gaagtaatac 1681 cagcaaacgg tgccttagtt ctgaacactg tgacagctaa agattcaggc aactatacct 1741 gttcggccat gaatcccata acaagtcaag aggttaaatt gccacaacgc attgatttga 1801 gggtggacta tagtgatcgc accccaccct attttttgac tcagccacca acgcaggtga 1861 cagctagacc gggagaaacg gtggtcttgg aatgccctgg tgtaggttca cccccacccg 1921 tagctgtctg gagttcaccc aatattatca atatgaataa taataatagg acgcggttat 1981 tgccttatgg cctacaaatt gtcgatgtgg tgcctgagga tcaggcacaa tatgtttgcc 2041 gtttggataa tggcatagcc ccggccttgg tacatggcat taaattgaat gttttggaaa 2101 aaccttctat actaaggggt ccagctctta ctttgaccaa tgaaagtgat acactggaac 2161 tggaatgctc agctgctgga aatccttatc cagacattta ttggctgata aatgatgtgg 2221 ataccaccat ggatccggaa atgcaacatg atgggcggcg tttggttata cgacatgtgc 2281 agaaacgtca tgcgggtata gtgcagtgct ttgccaaaaa tgaagtggga gaggttagcg 2341 atgccaatct tttgaaaata aatcccagac aaatccatgg ttcttcagct tcggctgcta 2401 cccctagacc cagatacgaa gatgtgggtg gtggcactaa gaaaggttcc cgcaagaagc 2461 ataagcctac catggtgcca ccttcacgtc ccaatgtcac tcgtttatcc gatgattcgg 2521 ttatgctgcg ttggtatgtg cccaaaaatg atggtctacc catacaattc tttaaagtac 2581 aatatcgcat gctgggcgat gcttcgcgca aaattccccg agaaaattgg caaaccacca 2641 atgatgacat agcctatggc aaacgtaata ccgatattag caagaattat acaacatcag 2701 tgacgggctt gaagccagat agattttatc gttttcgaat tgtggctgtc tataataatg 2761 atgacaacaa ggaaggcaat acatcatcga aattcttctt gcaacgtggt gatgctttgg 2821 atttatctaa atcgaattta cctataccgg aactggcacg cattgaggct ttatccgagt 2881 cggcagtaat gctgcaatgg tcattgccta ctgccgcggc cacatcacat atagatggtt 2941 tctatgctta ctataggccg gcagcatcgg ctggagaata tcaaaaggct acagtagatg 3001 gtatgcatac taggaaattc aaaattgata tgttggaagc aggtacagcc tatgaattta 3061 aattgcaatc atttaatgac atggctgcct cggagtttag tgctatagta caggggaaga 3121 caaaaaaatc agtcaccacc ccagctccta cgctgcccgc tgtggtgcca gccaccaaag 3181 ccaatcaaga ggacaattca atatttcccg tagttgcagg agcagctgga ggtggcatac 3241 tgttattaat agccaccata gcagcttgtt tgtgtatgaa aaagagaaag aattctcaaa 3301 atgaagatga aaataaaccc cagctggatc atattcaagc tgattttgtt acacctcaag 3361 tacaagtttt gggtgtcaac aatcatcata agggcaatca tcgtttaaat ggagtattac 3421 cacgcatgaa tataacccca aatcctttgg cccaagaggc cgataagaat cgtaatgtca 3481 tggaattgcg ctttatgagc aacaccaaca gcgccagtag tccggccaac agtaacagta 3541 atacaaacag caataacagt tgccacaaca gtcaggagaa actaaatagt tataatgccg 3601 aagaagcccc acatacacca cctcaacgtt ccacctcatc gtgtgaaaca ttagaggctg 3661 tagacggcat aaatagtcct ctaacaccca atggtctaga tgccgaatcg ccgctctcta 3721 aacctttgcc accattgcca agcaaaaata ccaacaaatt agcaaatcat acaactcctt 3781 cttcgttaaa gaacaataca gcatcgcttt caaaaagtaa tcatcaaagt aaatcatcta 3841 ctaataatct aaataattca caggctcact tagcatccca aggcatacat catgcgcagc 3901 cctattatca gactcctcca acacctacca tgatgaataa gcgggactat cagcagccac 3961 caccagtgcc accgcatcaa aacaacaatc atgcgcccat gatgaatcat catttgccgc 4021 ccacgggtca tcatgctccc ttgacaccta gcatggaaca gcaaaggcgc accctggatc 4081 gaggggtgcg caatatgaat tacaatcaaa gtaatggtaa tgccatgtca ccgccttcac 4141 atgatgctgc cttgaatatg gatggcatgg ccaccagaat accttcacta agaagaacac 4201 gtcgtacttc gggaggtagt accaacaatg cactgaatgc cttatcgaat aatcccaatg 4261 gtggcttggg tatacccatt gctgtcagtg gcagccctcg agtacaaaga tcacctatgc 4321 ccgcccgagc agcaatgatg aaacagcgtt cgcgtttggg cagtcacaat gacaatatat 4381 cttcgggcag tttaaacagt attgaagtgt agtcttctaa cataaagtaa aggagtcttc 4441 aacaaaaatt gtctacgagt atgagtttta gagaagtgta agttataaga acaatagata 4501 atttttaatt taataagaca attagttata agctatagaa atctttattt aagttaattt 4561 tataaggtaa gcctaagcca taccagcatt taattgtgta aaatcctaaa aaaaaatatg 4621 ctgttatgtc ttaggtatca cagatttagt ataagttgta tatacatatt cctattaatg 4681 tgaggtgata taagaatttg acagtttaca gcgaagaaag ttcggctcat aacttttcaa 4741 tcatttctca aaattttcaa aaaatgcgag tttttctttt tcattttgac ttaaaattgt 4801 ataaattttt acttctgtac gctatttctc tcaaggggga gaaagtcgac ttttgttgga 4861 aaatgagtat agatcttata tcgcctctac acacatcatc gagactttta tattttgaag 4921 atcatatata ttttgaatat taaacaactc gaatcctatt tgtaaaagac ttaaatccca 4981 ttagttagta tatgtctgaa tagagcatga cagtatgaaa agcccaaaag atagtcaatc 5041 ttatatgact atcttttgat agcgaaacta aaattcgaat attttattac atacatatat 5101 atttcatttt attgcataat agtgcttaaa cgtatgttga tatcttaaat tcataacatg 5161 gcaatatttt taacatacca gtataatagg tcacattata tttgcacaca aaacatcgat 5221 ccttttgatg gcaagatggt gatttaacca tatggttttt atgttgttgt gtgtgacaac 5281 ctttaaataa ttcagccatg ggtgttgtcc tatcttacca tattcggttc gaacatcatg 5341 aatcctgctg tagctcatta ttctaaataa cagcgatata ggctttagac cctcaatcgc 5401 aagatccgtc tataaggcag gtatatctaa gtatggtccg atataaacca cacccaggtc 5461 ctacttatca cagactgcac ttttgtactt ttgtccatta ttgttaaata acaacctttt 5521 agaataattt tacttatttt atgccaaata agtcgtttaa attaagcgac gtctgcccac 5581 aatttaggca gctaagttat gccgcacgca aattgtttac ctaaacgcaa atgaatttac 5641 aattactgac aagggacttt gctcaatgaa acgtcaaaat ttgctgtgct gccaaaaatc 5701 ttactggccc ttgggctact caaaaattat tcaccacact tgacgtcata ttttgactat 5761 ccccacaact ttgctaccat tcgacacata gccttaacaa taatgcctca tgaaatttat 5821 gttgcagtat taacaaatga aatttgcaac actctcaact ggtgtgaatg gttgagatgt 5881 tttccataac tacaatacat tagcaaaatt tgtcagtgta aacatagcat tagttcaaaa 5941 tgttaggata atgaagttat acatatatat ttgcctccac aatgggaatt taagacatca 6001 acatatcgta ttttgaaaaa caaaatattg aggcttaaca ttttattttc taatgccgaa 6061 agcacattat aaaaaatgag cacagaaacg aaataataaa gaaattttag aaaaaaaaag 6121 ttttcttatc gaatgtatat aaattaaaat ttataactaa ttttgtatag actctttaga 6181 gcttagttaa gttaatttat aatttaaaaa agtaatcaaa acacaaatta tttttttaag 6241 aatccatgta tgaaaccaat aacacaaatc tattgatcat tgccgtcctg tacatgtttt 6301 agttgcacaa acacatatat ttgtcattga gtttaataat atttaattat ttttttttaa 6361 taatcgggtg tgttctagta actacttaaa tttttcccga aaaaaacaaa ttgtaattat 6421 tacataaaca aaaacaaatc ttaatttctt atgatgaaaa acttttccca gctgtataca 6481 tttgtggtgt agtaattttt aacttaaact ccgtttacac tgctcattaa atccggatta 6541 aaggctctcg tcagctgatt ttattaaggg aaagcagtgt aacggggttt taatatgctt 6601 taaaaatgtt tttcatcccg taacttattc ctttagtatt ttttcttttt ttgtgaatac 6661 ttggttataa agccaaaaaa tattatttgt gagcttgcat acgaaaatat ttttttaaaa 6721 ataaatttaa taaaaaatgt ccagacctca caattgatac agctgggtct gaaagggttt 6781 attcaacaaa ttctatgatg caaattaatg aaatgttgac gctttatttg tgtaataaca 6841 aatagtttca acagggtgaa agcgagagtg aatcctagaa cgcgccagaa tgtttttagt 6901 ctattaaaag attatctaat taaaaaacta aggtatatat tatttgttaa taattaatta 6961 caaggttcat gtaaagtgag aagtgaaata tttatttatt tttaattatg ttttccatca 7021 aaagcgttag ggccaatttc tcaataactg gttattacgt atggtattgt taagtttatt 7081 ttatgattta atgaatgaat tttgttttgt gaaaattatg tggcatagca gttttttttt 7141 ttattaacac taaaaattct aatcagcaat tgagaaaatt gccctaatgt ctttaatata 7201 aaaggacaca gtatgacaaa atgccctctg gtaatgcaag atatgatttg accagatata 7261 ttttattata aaatcttcat aaaatatacc gtttttaaaa attctaacct tttggtgaaa 7321 cccattgttt taagaacatt ttttactgtt acgtatgtaa tgtacaaatt ttcgaagatt 7381 ttttttgtca tcttgttctt taagtttatt tttaaaatac catgcttcct