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LOCUS XM_059366213 9344 bp mRNA linear INV 02-SEP-2023 (LOC106088904), transcript variant X9, mRNA. ACCESSION XM_059366213 VERSION XM_059366213.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..9344 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..9344 /gene="LOC106088904" /note="uncharacterized LOC106088904; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106088904" CDS 1566..8114 /gene="LOC106088904" /codon_start=1 /product="uncharacterized protein LOC106088904 isoform X5" /protein_id="XP_059222196.1" /db_xref="GeneID:106088904" /translation="MVSTILTTIAAAGQTKSGINNLHSTAPATAATASPERRNQNTTS GTSETTNRSIYYQTSRSVNSSSSASSAGHSSHHHHQQQNNSSVSSPISSKVNSRNSSY SHCQGSRSVQQSHVESKLNGNDCDSVIDYANHNAVKYYQGEQQHQKYLNGKGVNCEGT KFESSSTLSATTTVDLSQALVGSSPPIKDQISLLFPKCRPKQQQSNTTVPVTPSEHQT PGVTPPATDVNTNCGNVDHSNNSVATTLKPRYYSKGAATAPLNGFDSESKEKVTSNHY YRSVNIITQSPPPHSASSISSESLSSVTPRISTNPFLCNTLLTPTAEAEETQKRPAIR EDIAAEDDQKLHNKDVQQKSHSNLKDNGVEDELPVPNYEPFCYHNSSPKSKEKSAPRQ YRDSEQGHRESRSYSDMPRKRSQYERFHHMNGQNYVTEKSYNHINHTEPTQQTNSSHQ QNGHPNPNQNPFVKDNNYWESSRQGNNSNTTPTSTVLNSPEYSGNGVTENEPNRPQHR RSIYQQQQDPSQPQQHPQQQTSCSYMGGGRQHIRLGRSPNGESSYDATQKRNSYNASQ TQNSQNQKSHSNAEAGHKTLAQHYLYGSKTSLHDHIPNQPTEWPEKRESHERASTLMR ERDREREQREQRSKAERYINAALVRESVGEANPPTTLELRDRRDRERERQSYQQQQSQ KYQQKSSSNQYHQQRAAQHHHQQQQQHNQPQRQLTEERLSTTNEVIFDDITENWQKYE GSPRRIGQMGNTNNDEDHHHRVNSGKTQANVANKTNHHNVISTNPASGTAAAMATTPA PATANVASNSPKQHYAARPGFPQRIISPQRETTPPIMLLNYNGKSQQQLQQQHHQQLN SQSLPQHHQHQSPTRDNNAEDTSNDVSEIGTISDLATPEAISHMTATAGGIHMGTVGG GSGGMCESRVSTSPSPPLPSSLDIENGSVSASATTAAPPTATTSMTVSSSSCGTPSSN ATTAPPTNTLALTTMTSLNNVANTSATLTTSNGGGIPVAASTAPAPATPTMGVIVSSN PLTIPSKSSTFDYLYEFSETRKVLEEFFKCPSNDDKPIIENSSDVDSIDIQYEFHSNL TRGDIEEDEGDGDVEADDDEDEIQLDGDNDEDIENNGDGDAETPQHHQQQQQLHGHNH QQLQQQLHQQHTQNNHHGLNHHSSFRNHLQSPTQFTYRPYNEDDDDDIDLDNDGGVGH HEDGQHYQDIHQHQQQEQQENHHNFSLLNNRHSNSSSTRQHNSRRHFTGSPLMRDFDF FLDSASRSSCEQIDQQIDGINHNQMNTGNRQNYRYSPETTDYDSNCGDLDSLSGEMNG GVSTSCSNYAKFYASSMPVLEDGLSSGHTSDTENNNQNNLLNQQNSGIHHTPIGGGIS MLMDMKRVSTNNSINSNSNSKDGVGGSVSGGSVANEKQNATMSPNILHDSFMRKNESP INGLLDESMREVVRVKPDIRDTREREIIGQSPNAMSNNKVFKNIDPDLDSLYSISVFH RNDMVQMTPPPPAPAPHRKPNVLSAEPDILQPTPYRDLRPGTNNSNSPTKTNITATTL TSSNSSSNAMQNNSPTQQAQSIKRAAQQQQQAPPPLPERNAPRSPSPVMNSPVWLSRH LEVSSNKGLLESPSENHSKNLSADEDDVDTDLETDRLLGHQRLDDQGYYDENKTWDRK PTRSLLSKISPKQVPSTKTRNGYNALLSSTPEIPPPVPPKNSSNKLLDIGGSISSPEH SDKSPIKSIDIQDCGLTLGSPGGSVGSGQMKKDEIGGGGPASGNSSTASGNIVNGGTG NAGGTGSSVGSGGSTTGEKKVKKSKNKEGGAVLIEGVLFRAKYLGSTQLVCEGQPTKS TRMMQAEEAVSRIKAPDGDVQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIA DIGDLVVLMARRRFVPQDIDDAPKPNRTPKMICHVFESDEAQFIAQSIGQAFQVAYME FLKANGIEDHRFVKEMDYQEVLNSQEIFGDELEIFAKKELQKEVVVPKAKGEILGVVI VESGWGSMLPTVVIANLMSSGAAARCGQLNIGDQLIAINGLSLVGLPLSTCQTYIKNT KNQTVVKFTVVPCPPVVEVKIKRPETKYQLGFSVQNGVICSLLRGGIAERGGVRVGHR IIEINNQSVVAVPHEKIVNLLATSVGEILMKTMPTSMFRLLTGQENPIYI" polyA_site 9344 /gene="LOC106088904" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaacgtattc aaacgcgcta gcagtgaaaa cgttgttgca ttaaatgtga ataccacaag 61 agagtgaaaa agagaaaata tttatattta tcaaacgagt gaatgaataa aaaggataac 121 aaaatggaaa ttataaaaaa gaaaaaataa ataaaaacag cccagtgctt taaggtgcag 181 tagaggcgaa tgaggcccct ctttaaaaaa aaacacaaca gaaagcaatc tgtcagaaag 241 tgagaaaaaa gtaatggaaa cacaaaatta ttagcttggc caaaaattga ttaaataaaa 301 agtgaaacta attctttaaa accaaacaaa aaaaaacatt aaaagagagt ttaaacgaaa 361 taataaactt ctgccacaac agttctcacc aacgaaagtg taaaacaata aaaggaagat 421 tgctaacata accggaagtc gtgttttgaa aacgtaaaag taacggtgaa tgtcatatat 481 aacctaatga caaatagctt cagtgtgtgt gcgcgcttat gttattcgct ttaaacccaa 541 ttttaatcaa ttcagcagtc tttagtattt gtaaacagaa gacgataatt tttcagattg 601 aaggaaataa acgcaaacat gttccgctta actagctcca ggaaatagta gagcgttgcg 661 ttccaaaaac aattacttga atcaacaatt aactaaatac catgtaacaa aaatacaaaa 721 aaaaaaacaa aataaaaaaa taaacataaa actatttgag tataacctgt atcatcaaaa 781 tacaaaataa aattgagttg acattttcaa tgttgttatt gacttgttat attttttgag 841 aaactaataa gcaagctaac gaacaaatac tttattcata tgtatatgta catgtatgta 901 tgccaccaaa actatctgta tatgaacaac acatctatct atactactat tcttacccta 961 aaaacagaca ttccagaacc aacctatcaa ccatactgca ttacttgctt agtatgcaat 1021 gccaccttcc tatcctgcca ctctcgtcaa tatttgtttc tactgacaac tccaacaaca 1081 acaactccat aactaacaac tacagctaca ataaccaatc aaacaccact gtattgtatt 1141 cttatcaact tctcctagtt gtgtttgtgt ttctttgtga atgccttctg tttttttgtg 1201 tgcgtgagag tgtttgtctc tgtatttgaa aaagaaaaat cgaaatagcc aagaaaggac 1261 acagcttaaa tattaattgc atacatctct gcaattccct gatgtccttt gtcccttaac 1321 aattattcaa attatatcct taatattttt aaaacttttc ccgaaatata aacaaacaaa 1381 aaacaatcgt tgtaaaatta caattatacc aaaatcatca ccacaaaaca aaaaaaataa 1441 caacaaaact tttctaaaat atacacaaca acaataacta tctaactaac ttatctgcaa 1501 tctccaatcg ttacaatatt gaggttcatg ttatccagta aactttaagt taattgacta 1561 caataatggt cagcacaata ttgacaacaa ttgctgctgc tggacaaaca aaaagtggca 1621 ttaacaattt gcattcaact gctcctgcaa cagcagcgac tgcttcaccg gagagacgta 1681 atcaaaatac gacaagtggt acaagtgaaa ctaccaaccg ttccatatat tatcagacta 1741 gcagatcggt aaactcatcc tcctctgcgt cgtcggcggg ccatagcagt catcatcatc 1801 accagcaaca gaataactct tcagtatcat cgcccatctc cagcaaagtc aactctcgga 1861 atagttcgta ttcgcattgc cagggcagtc gcagtgtaca acaatctcac gtagagagca 1921 aactaaatgg caacgactgc gacagcgtca tcgattacgc caatcacaac gcagtcaagt 1981 actaccaagg ggaacaacaa catcagaaat atttgaatgg taagggcgta aattgtgaag 2041 gcacaaagtt cgaatcgtca tcgacgcttt ccgctaccac cacagtagat ctgtcgcagg 2101 cattggtagg ctcctcgccc ccaattaaag atcaaatttc attgttgttt cccaagtgca 2161 ggccaaaaca gcaacagtcc aacactacag tcccagtaac gccatcggaa catcagaccc 2221 ccggtgtgac accaccagcc acagatgtta acacgaattg cggcaacgtg gaccattcaa 2281 acaattcggt ggcaactact ttaaagccta ggtattactc caagggagct gcaacagcgc 2341 ctctcaacgg ttttgattcg gaaagcaagg agaaggtgac atccaatcac tattaccgca 2401 gtgtgaatat cattactcag tcaccgccac cacatagtgc gtcatcgata tcgtcagagt 2461 ccttgtcatc ggttacgcca cgcatttcca caaacccttt tctgtgcaat actctcctca 2521 ctccgactgc cgaagcagaa gaaacacaaa agcgacccgc tatcagagaa gacatcgcgg 2581 cggaagacga ccaaaagctg cataataaag acgtacaaca aaaaagtcac tctaatctta 2641 aagacaacgg cgtcgaggac gaattgccag tgcctaacta cgaacccttt tgctaccaca 2701 actcgagtcc caagagtaag gaaaaatcag caccacgcca gtatcgggat tcagagcaag 2761 gacatcgcga atcgcgttca tacagcgata tgccgcgaaa acgttctcaa tatgaacgtt 2821 ttcatcatat gaatggccaa aactatgtga cggaaaaatc ctacaaccat ataaaccaca 2881 ctgagccaac acaacagacg aatagcagcc atcagcaaaa tggtcatccg aatcctaatc 2941 aaaatccatt cgtcaaagac aataactact gggagtcgtc gcgacaggga aacaattcca 3001 ataccacacc cactagtacg gttttgaatt cgcctgagta tagcggcaac ggcgtcacgg 3061 aaaacgaacc caatcggccc cagcacagac ggtccatata ccagcaacaa caggacccat 3121 cgcagcctca gcagcatcct caacagcaaa cctcgtgctc ttacatgggt ggtgggcgcc 3181 aacacatacg cctgggtcgt agtcccaacg gtgaatctag ttatgatgcc acccaaaaac 3241 gcaacagcta caatgcttct caaacacaaa acagtcaaaa tcaaaagtca cattccaatg 3301 ccgaagcggg acataagact ctggcccaac attatctcta tggaagtaaa acttcgctgc 3361 atgatcacat acccaatcag ccgactgaat ggcctgaaaa acgcgagtcc catgaacgtg 3421 cgtccaccct catgcgagaa cgggatcgtg aacgtgagca acgcgaacaa cgcagcaaag 3481 cagagcgtta tattaatgct gctttagtac gggaatcggt gggtgaggcg aatcctccca 3541 caactttaga attacgtgat agacgtgacc gcgagcgtga acgccaatca taccagcagc 3601 agcaatcgca aaaatatcaa caaaagtcct cctcaaatca gtatcaccag cagagggcag 3661 ctcaacacca tcatcaacag cagcaacaac ataatcagcc ccagcgtcaa ttgacggagg 3721 aacgtttgtc caccacaaat gaagtgatat tcgatgacat tactgagaat tggcagaaat 3781 acgaaggttc ccccagacgc attggacaaa tgggcaacac aaataacgat gaggatcatc 3841 atcaccgggt aaacagtggt aaaacccaag caaatgttgc aaataaaacc aatcatcata 3901 atgtcatctc caccaacccc gcctcaggga cggcggcagc tatggccacc acaccagcgc 3961 cagcgacagc aaatgtggca agcaattctc ccaagcagca ctatgcggcc agaccaggtt 4021 ttccacagcg tatcatatcc ccacaacgtg agacaactcc accgattatg ctgctaaatt 4081 acaatggcaa aagtcaacag cagctgcagc agcaacacca tcagcaattg aattcccaat 4141 cgttgcctca acaccaccag catcagtcgc caacgaggga caacaatgcc gaagatacca 4201 gcaatgatgt atcggaaatt ggcacaatat ctgacctggc aacgccagag gccattagcc 4261 atatgacagc gacggcgggt ggcatacaca tgggaacggt cggcggcggc agcggtggca 4321 tgtgcgaaag tcgtgtctcc acatcaccct cgccaccatt gccatcctca ttggatatag 4381 aaaatggttc ggtgtcggca tcagccacta ctgcagcacc cccgactgcc acaacatcaa 4441 tgacagtcag ttccagctca tgcggcaccc cttcgagcaa tgcaaccaca gcgccaccca 4501 ccaacacttt agccttgacg acaatgacat ccttaaacaa tgttgccaac acgtcggcga 4561 cattaacgac gtccaatggt ggtggtatcc cagtggcagc atcaacagct cctgcacccg 4621 ctacgccaac gatgggcgtc attgtcagca gcaacccctt gactataccc agcaagtcat 4681 caacctttga ttacctttac gaattctcag aaacgcgcaa ggtactcgaa gagtttttca 4741 agtgcccctc taacgatgac aagcccatca tagagaatag cagtgatgtc gatagtatcg 4801 acatacaata tgaattccac agcaatctca ctcgtggtga cattgaggag gatgaaggcg 4861 atggcgatgt ggaggccgat gacgatgaag atgaaatcca attggatggt gacaatgacg 4921 aggacattga gaataacggt gatggtgatg cagagacgcc ccaacaccac caacaacagc 4981 agcaactgca tggacacaat catcagcagc tgcaacaaca attgcatcaa cagcacacac 5041 agaacaatca tcatggccta aatcatcatt caagttttcg aaatcacctc caatcgccca 5101 cacaattcac ctatcgtcca tataacgaag atgatgatga cgatatcgat ctggacaatg 5161 atggcggggt gggtcaccac gaggatggcc aacactatca ggatatccac caacatcagc 5221 aacaggaaca acaagagaat catcacaatt tctcattact gaacaatcgc cacagcaata 5281 gtagcagcac acgccagcac aactcacggc gccactttac tggcagccca ttgatgcgcg 5341 attttgattt ctttttggac tcggcaagtc gcagtagctg cgaacaaata gatcaacaaa 5401 tcgatggcat caatcacaat caaatgaata ccggaaatcg acaaaattat cgctactccc 5461 cagagacaac cgattatgat tcaaattgtg gtgatttgga tagtctctcg ggtgaaatga 5521 atggcggcgt atctacttcc tgttccaatt atgctaaatt ctatgcatca agcatgcccg 5581 tgctggagga tggtctttcc tcgggtcaca catctgacac cgagaacaat aatcagaata 5641 atttgttaaa tcaacaaaac tctggcatac atcacacgcc aataggtggt ggcatatcta 5701 tgttgatgga tatgaagcgg gtctccacca acaacagcat taatagcaac agtaacagca 5761 aagatggcgt aggcggcagt gtaagcggcg gaagtgtggc taatgagaaa cagaatgcaa 5821 caatgtcacc taatattctg catgactcgt tcatgcgtaa aaatgagagc cccattaacg 5881 ggttactgga cgagagcatg cgcgaagtgg tgcgtgttaa gccggacata cgagacacac 5941 gggaacgaga gataatagga caaagtccca atgcgatgag caataacaaa gtattcaaaa 6001 atattgatcc tgacttggat tctttgtatt cgataagtgt gtttcatcgc aatgatatgg 6061 tgcaaatgac tcctccaccc ccagctccag caccacatcg caagcccaat gttctgtcag 6121 ctgagcctga tattctgcag cccacaccgt acagggacct gcggcccggt actaacaatt 6181 ccaattcacc cactaaaacc aacattactg caactacttt gacctctagc aatagcagta 6241 gtaatgctat gcagaacaac tctccgacgc aacaagctca aagtataaaa cgtgcagcac 6301 aacaacaaca acaagcgcca ccaccattgc cagaacgtaa tgcaccacgt tccccatcgc 6361 ctgtgatgaa ttccccagtg tggctctcac gccatctaga ggttagttcc aacaaaggcc 6421 ttttagaatc gccctcagaa aaccattcaa aaaatctgag cgccgatgag gatgatgtag 6481 atacagactt ggaaacagat cgcttgcttg gtcaccaacg cctcgatgac cagggctact 6541 atgatgagaa caagacgtgg gatcggaaac ctacgagatc gttactctca aagatctctc 6601 ccaagcaggt gccaagcacc aaaactcgta atggttacaa tgccttactc tcgtccactc 6661 cggaaatccc accgccagtt ccgccaaaaa attcctccaa caaacttttg gacattggtg 6721 gttcgatttc ttcgccggag cacagtgata aatcgcccat aaagtctata gacatacaag 6781 attgtggcct cactctcggc tcccccggcg gttcagtggg ttccggccaa atgaaaaagg 6841 acgaaatcgg aggaggaggc ccagccagtg gcaatagcag caccgccagc ggcaacattg 6901 tgaatggcgg cacgggcaac gcaggaggca ccggcagcag tgttggatcc ggtggcagca 6961 caacaggcga gaaaaaagtt aaaaagagta agaacaaaga aggcggtgca gtgctgatcg 7021 aaggtgtcct cttccgggca aaatatttgg gctccactca gttggtgtgc gagggccaac 7081 ccacaaaatc cacccgcatg atgcaggctg aggaggcagt atcaaggata aaggcacctg 7141 atggtgatgt gcaacccagc acagaggtgg atctgtttat atccactgaa aagataatgg 7201 tcctaaatac tgatctcaag gagattatga tggatcatgc gttacgcaca atttcctaca 7261 tagccgatat tggagatttg gtggtattaa tggcccgccg cagatttgtg cctcaggaca 7321 tcgatgatgc ccccaaaccg aatcgaacgc ccaaaatgat atgtcacgtc tttgagagtg 7381 acgaagccca attcatagcc caatcgattg ggcaagcctt ccaggtggcc tacatggagt 7441 tccttaaagc gaatggaatt gaagatcatc gttttgttaa ggaaatggac taccaggaag 7501 ttctcaatag ccaggaaatt ttcggcgatg aattggaaat attcgccaag aaggaactac 7561 agaaggaggt ggtggtgccc aaggccaagg gcgaaatatt gggtgtagtg attgtcgaat 7621 cgggttgggg ctctatgctg cccactgtag taatagcgaa tcttatgtcc tcgggcgcag 7681 cggctcgttg tggtcaattg aatataggcg atcagctgat agccatcaat ggtctaagct 7741 tggttggctt gccattatcc acatgccaga cttatataaa aaataccaaa aatcaaactg 7801 tggtaaaatt caccgtggtg ccatgtccac ctgtggttga ggtgaaaatc aagagacccg 7861 aaactaaata tcaacttggt ttcagcgtgc aaaatggtgt gatttgtagt ttactacgag 7921 gcggtattgc cgaacgagga ggtgtccgag tgggccatag gattattgaa attaataacc 7981 aaagtgtagt tgccgtacct catgagaaaa ttgtaaatct tttagccacg tccgttggag 8041 agattttaat gaaaaccatg cctacatcaa tgttccgcct attaaccggc caggagaatc 8101 caatttatat ataaataaat aataaacaaa atttaaatgc aaacaaatat atatatatat 8161 atatatatat atatatatat atatatatac atttatatat atacaaacaa atgaaaaaac 8221 aattaatttt taggagaaca tataaccaaa cctaaataag taaaccaaaa ttatatacag 8281 aaagttaaaa caaaagcgta aacacactca cacacaaacc agtcaagtaa tttgcaactc 8341 taactagtct aaataaaaat taaataattt acactaattt attaatgaaa gctgtaactg 8401 tctctttcta ttatctactt atacctatat acagtcctct ttagaattca tataaaatat 8461 ttataaatta aaaaaaaata aaaataataa aagaaaaatt tggaaaaaga aagcagaagt 8521 tattgtaaat cttgatcaca taattatata tgatttatat attaaaatta ttattatata 8581 caatttataa atatatataa ataactatat acataactat atatatagaa caagaataca 8641 ataaaagatg atgataaaac tgttaactaa ttacttgact aatgtcaata gcagattaat 8701 tggaaacttt tagtattaca acaaaataca agaacacctc cccacaataa gctccaaacc 8761 tgtcctagtc aatgcgctat attgtctttc tgtattctgt cctaatgcta ttaaattatt 8821 tactcgtata tcctgtgttt aatgaccact ataaccaagg ctatttattg caaaaaccga 8881 tttaaaacga aacaaacatt tatgtataac caattctctt aaatactcag aaactaaaca 8941 acaaaaacta caaaaaaaaa tatattgcat agacgtccat atatagagct acaacagatc 9001 gaccgaaccc ccgattcaat atgaaatgct ttagtaacaa ttttgaaaat gtaaccattt 9061 aaatatgtat taggtagttc cggttctctc taacaagaca gacactctca cacacacaga 9121 gatacaccca cacatgcata tacatacatt ccacacaata aaaattatat acacttgtat 9181 tgattgattc actcactgat tcgtatgtac ttaaactaat accattatca ataattgaag 9241 aaaaaaagga aataataaga aacaaaacca aaattgatat gaaaccaata aacaaacact 9301 cgcttgaata atgaaaataa ataaaattat ttgaatttcg atta