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LOCUS XM_059366211 9680 bp mRNA linear INV 02-SEP-2023 (LOC106088904), transcript variant X7, mRNA. ACCESSION XM_059366211 VERSION XM_059366211.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..9680 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..9680 /gene="LOC106088904" /note="uncharacterized LOC106088904; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106088904" CDS 1566..8450 /gene="LOC106088904" /codon_start=1 /product="uncharacterized protein LOC106088904 isoform X3" /protein_id="XP_059222194.1" /db_xref="GeneID:106088904" /translation="MVSTILTTIAAAGQTKSGINNLHSTAPATAATASPERRNQNTTS GTSETTNRSIYYQTSRSVNSSSSASSAGHSSHHHHQQQNNSSVSSPISSKVNSRNSSY SHCQGSRSVQQSHVESKLNGNDCDSVIDYANHNAVKYYQGEQQHQKYLNGKGVNCEGT KFESSSTLSATTTVDLSQALVGSSPPIKDQISLLFPKCRPKQQQSNTTVPVTPSEHQT PGVTPPATDVNTNCGNVDHSNNSVATTLKPRYYSKGAATAPLNGFDSESKEKVTSNHY YRSVNIITQSPPPHSASSISSESLSSVTPRISTNPFLCNTLLTPTAEAEETQKRPAIR EDIAAEDDQKLHNKDVQQKSHSNLKDNGVEDELPVPNYEPFCYHNSSPKSKEKSAPRQ YRDSEQGHRESRSYSDMPRKRSQYERFHHMNGQNYVTEKSYNHINHTEPTQQTNSSHQ QNGHPNPNQNPFVKDNNYWESSRQGNNSNTTPTSTVLNSPEYSGNGVTENEPNRPQHR RSIYQQQQDPSQPQQHPQQQTSCSYMGGGRQHIRLGRSPNGESSYDATQKRNSYNASQ TQNSQNQKSHSNAEAGHKTLAQHYLYGSKTSLHDHIPNQPTEWPEKRESHERASTLMR ERDREREQREQRSKAERYINAALVRESVGEANPPTTLELRDRRDRERERQSYQQQQSQ KYQQKSSSNQYHQQRAAQHHHQQQQQHNQPQRQLTEERLSTTNEVIFDDITENWQNLR VTTDSSQINHNRNSLLAEVKSHNDSSSNTTSTTTLTTSSNLLLSSVPKKSHLLVADVK DDKLQSHSQIQAPKSSHHVPANNCDVDLSSSPSYQEHKKYSEKSHGISVESRHGIIEY EGSPRRIGQMGNTNNDEDHHHRVNSGKTQANVANKTNHHNVISTNPASGTAAAMATTP APATANVASNSPKQHYAARPGFPQRIISPQRETTPPIMLLNYNGKSQQQLQQQHHQQL NSQSLPQHHQHQSPTRDNNAEDTSNDVSEIGTISDLATPEAISHMTATAGGIHMGTVG GGSGGMCESRVSTSPSPPLPSSLDIENGSVSASATTAAPPTATTSMTVSSSSCGTPSS NATTAPPTNTLALTTMTSLNNVANTSATLTTSNGGGIPVAASTAPAPATPTMGVIVSS NPLTIPSKSSTFDYLYEFSETRKVLEEFFKCPSNDDKPIIENSSDVDSIDIQYEFHSN LTRGDIEEDEGDGDVEADDDEDEIQLDGDNDEDIENNGDGDAETPQHHQQQQQLHGHN HQQLQQQLHQQHTQNNHHGLNHHSSFRNHLQSPTQFTYRPYNEDDDDDIDLDNDGGVG HHEDGQHYQDIHQHQQQEQQENHHNFSLLNNRHSNSSSTRQHNSRRHFTGSPLMRDFD FFLDSASRSSCEQIDQQIDGINHNQMNTGNRQNYRYSPETTDYDSNCGDLDSLSGEMN GGVSTSCSNYAKFYASSMPVLEDGLSSGHTSDTENNNQNNLLNQQNSGIHHTPIGGGI SMLMDMKRVSTNNSINSNSNSKDGVGGSVSGGSVANEKQNATMSPNILHDSFMRKNES PINGLLDESMREVVRVKPDIRDTREREIIGQSPNAMSNNKVFKNIDPDLDSLYSISVF HRNDMVQMTPPPPAPAPHRKPNVLSAEPDILQPTPYRDLRPGTNNSNSPTKTNITATT LTSSNSSSNAMQNNSPTQQAQSIKRAAQQQQQAPPPLPERNAPRSPSPVMNSPVWLSR HLEVSSNKGLLESPSENHSKNLSADEDDVDTDLETDRLLGHQRLDDQGYYDENKTWDR KPTRSLLSKISPKQVPSTKTRNGYNALLSSTPEIPPPVPPKNSSNKLLDIGGSISSPE HSDKSPIKSIDIQDCGLTLGSPGGSVGSGQMKKDEIGGGGPASGNSSTASGNIVNGGT GNAGGTGSSVGSGGSTTGEKKVKKSGAVLIEGVLFRAKYLGSTQLVCEGQPTKSTRMM QAEEAVSRIKAPDGDVQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGD LVVLMARRRFVPQDIDDAPKPNRTPKMICHVFESDEAQFIAQSIGQAFQVAYMEFLKA NGIEDHRFVKEMDYQEVLNSQEIFGDELEIFAKKELQKEVVVPKAKGEILGVVIVESG WGSMLPTVVIANLMSSGAAARCGQLNIGDQLIAINGLSLVGLPLSTCQTYIKNTKNQT VVKFTVVPCPPVVEVKIKRPETKYQLGFSVQNGVICSLLRGGIAERGGVRVGHRIIEI NNQSVVAVPHEKIVNLLATSVGEILMKTMPTSMFRLLTGQENPIYI" polyA_site 9680 /gene="LOC106088904" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaacgtattc aaacgcgcta gcagtgaaaa cgttgttgca ttaaatgtga ataccacaag 61 agagtgaaaa agagaaaata tttatattta tcaaacgagt gaatgaataa aaaggataac 121 aaaatggaaa ttataaaaaa gaaaaaataa ataaaaacag cccagtgctt taaggtgcag 181 tagaggcgaa tgaggcccct ctttaaaaaa aaacacaaca gaaagcaatc tgtcagaaag 241 tgagaaaaaa gtaatggaaa cacaaaatta ttagcttggc caaaaattga ttaaataaaa 301 agtgaaacta attctttaaa accaaacaaa aaaaaacatt aaaagagagt ttaaacgaaa 361 taataaactt ctgccacaac agttctcacc aacgaaagtg taaaacaata aaaggaagat 421 tgctaacata accggaagtc gtgttttgaa aacgtaaaag taacggtgaa tgtcatatat 481 aacctaatga caaatagctt cagtgtgtgt gcgcgcttat gttattcgct ttaaacccaa 541 ttttaatcaa ttcagcagtc tttagtattt gtaaacagaa gacgataatt tttcagattg 601 aaggaaataa acgcaaacat gttccgctta actagctcca ggaaatagta gagcgttgcg 661 ttccaaaaac aattacttga atcaacaatt aactaaatac catgtaacaa aaatacaaaa 721 aaaaaaacaa aataaaaaaa taaacataaa actatttgag tataacctgt atcatcaaaa 781 tacaaaataa aattgagttg acattttcaa tgttgttatt gacttgttat attttttgag 841 aaactaataa gcaagctaac gaacaaatac tttattcata tgtatatgta catgtatgta 901 tgccaccaaa actatctgta tatgaacaac acatctatct atactactat tcttacccta 961 aaaacagaca ttccagaacc aacctatcaa ccatactgca ttacttgctt agtatgcaat 1021 gccaccttcc tatcctgcca ctctcgtcaa tatttgtttc tactgacaac tccaacaaca 1081 acaactccat aactaacaac tacagctaca ataaccaatc aaacaccact gtattgtatt 1141 cttatcaact tctcctagtt gtgtttgtgt ttctttgtga atgccttctg tttttttgtg 1201 tgcgtgagag tgtttgtctc tgtatttgaa aaagaaaaat cgaaatagcc aagaaaggac 1261 acagcttaaa tattaattgc atacatctct gcaattccct gatgtccttt gtcccttaac 1321 aattattcaa attatatcct taatattttt aaaacttttc ccgaaatata aacaaacaaa 1381 aaacaatcgt tgtaaaatta caattatacc aaaatcatca ccacaaaaca aaaaaaataa 1441 caacaaaact tttctaaaat atacacaaca acaataacta tctaactaac ttatctgcaa 1501 tctccaatcg ttacaatatt gaggttcatg ttatccagta aactttaagt taattgacta 1561 caataatggt cagcacaata ttgacaacaa ttgctgctgc tggacaaaca aaaagtggca 1621 ttaacaattt gcattcaact gctcctgcaa cagcagcgac tgcttcaccg gagagacgta 1681 atcaaaatac gacaagtggt acaagtgaaa ctaccaaccg ttccatatat tatcagacta 1741 gcagatcggt aaactcatcc tcctctgcgt cgtcggcggg ccatagcagt catcatcatc 1801 accagcaaca gaataactct tcagtatcat cgcccatctc cagcaaagtc aactctcgga 1861 atagttcgta ttcgcattgc cagggcagtc gcagtgtaca acaatctcac gtagagagca 1921 aactaaatgg caacgactgc gacagcgtca tcgattacgc caatcacaac gcagtcaagt 1981 actaccaagg ggaacaacaa catcagaaat atttgaatgg taagggcgta aattgtgaag 2041 gcacaaagtt cgaatcgtca tcgacgcttt ccgctaccac cacagtagat ctgtcgcagg 2101 cattggtagg ctcctcgccc ccaattaaag atcaaatttc attgttgttt cccaagtgca 2161 ggccaaaaca gcaacagtcc aacactacag tcccagtaac gccatcggaa catcagaccc 2221 ccggtgtgac accaccagcc acagatgtta acacgaattg cggcaacgtg gaccattcaa 2281 acaattcggt ggcaactact ttaaagccta ggtattactc caagggagct gcaacagcgc 2341 ctctcaacgg ttttgattcg gaaagcaagg agaaggtgac atccaatcac tattaccgca 2401 gtgtgaatat cattactcag tcaccgccac cacatagtgc gtcatcgata tcgtcagagt 2461 ccttgtcatc ggttacgcca cgcatttcca caaacccttt tctgtgcaat actctcctca 2521 ctccgactgc cgaagcagaa gaaacacaaa agcgacccgc tatcagagaa gacatcgcgg 2581 cggaagacga ccaaaagctg cataataaag acgtacaaca aaaaagtcac tctaatctta 2641 aagacaacgg cgtcgaggac gaattgccag tgcctaacta cgaacccttt tgctaccaca 2701 actcgagtcc caagagtaag gaaaaatcag caccacgcca gtatcgggat tcagagcaag 2761 gacatcgcga atcgcgttca tacagcgata tgccgcgaaa acgttctcaa tatgaacgtt 2821 ttcatcatat gaatggccaa aactatgtga cggaaaaatc ctacaaccat ataaaccaca 2881 ctgagccaac acaacagacg aatagcagcc atcagcaaaa tggtcatccg aatcctaatc 2941 aaaatccatt cgtcaaagac aataactact gggagtcgtc gcgacaggga aacaattcca 3001 ataccacacc cactagtacg gttttgaatt cgcctgagta tagcggcaac ggcgtcacgg 3061 aaaacgaacc caatcggccc cagcacagac ggtccatata ccagcaacaa caggacccat 3121 cgcagcctca gcagcatcct caacagcaaa cctcgtgctc ttacatgggt ggtgggcgcc 3181 aacacatacg cctgggtcgt agtcccaacg gtgaatctag ttatgatgcc acccaaaaac 3241 gcaacagcta caatgcttct caaacacaaa acagtcaaaa tcaaaagtca cattccaatg 3301 ccgaagcggg acataagact ctggcccaac attatctcta tggaagtaaa acttcgctgc 3361 atgatcacat acccaatcag ccgactgaat ggcctgaaaa acgcgagtcc catgaacgtg 3421 cgtccaccct catgcgagaa cgggatcgtg aacgtgagca acgcgaacaa cgcagcaaag 3481 cagagcgtta tattaatgct gctttagtac gggaatcggt gggtgaggcg aatcctccca 3541 caactttaga attacgtgat agacgtgacc gcgagcgtga acgccaatca taccagcagc 3601 agcaatcgca aaaatatcaa caaaagtcct cctcaaatca gtatcaccag cagagggcag 3661 ctcaacacca tcatcaacag cagcaacaac ataatcagcc ccagcgtcaa ttgacggagg 3721 aacgtttgtc caccacaaat gaagtgatat tcgatgacat tactgagaat tggcagaatt 3781 tacgcgttac aaccgactca tcgcaaatca accacaatcg caattcatta ttagcggaag 3841 taaaaagcca caatgactcc agcagtaata caacgtccac tacgacatta actacatcgt 3901 cgaatctttt gttgagcagt gtaccgaaaa agtcccattt attggtggca gatgttaaag 3961 atgacaaact ccaaagccac tcacagatac aggcacctaa atcgtcccat catgtgccgg 4021 cgaacaattg cgatgtggac ttgtcatcgt cgccctccta tcaagagcac aaaaagtact 4081 cagaaaaaag tcatggaatt agtgtagaat cacgtcatgg tattatagaa tacgaaggtt 4141 cccccagacg cattggacaa atgggcaaca caaataacga tgaggatcat catcaccggg 4201 taaacagtgg taaaacccaa gcaaatgttg caaataaaac caatcatcat aatgtcatct 4261 ccaccaaccc cgcctcaggg acggcggcag ctatggccac cacaccagcg ccagcgacag 4321 caaatgtggc aagcaattct cccaagcagc actatgcggc cagaccaggt tttccacagc 4381 gtatcatatc cccacaacgt gagacaactc caccgattat gctgctaaat tacaatggca 4441 aaagtcaaca gcagctgcag cagcaacacc atcagcaatt gaattcccaa tcgttgcctc 4501 aacaccacca gcatcagtcg ccaacgaggg acaacaatgc cgaagatacc agcaatgatg 4561 tatcggaaat tggcacaata tctgacctgg caacgccaga ggccattagc catatgacag 4621 cgacggcggg tggcatacac atgggaacgg tcggcggcgg cagcggtggc atgtgcgaaa 4681 gtcgtgtctc cacatcaccc tcgccaccat tgccatcctc attggatata gaaaatggtt 4741 cggtgtcggc atcagccact actgcagcac ccccgactgc cacaacatca atgacagtca 4801 gttccagctc atgcggcacc ccttcgagca atgcaaccac agcgccaccc accaacactt 4861 tagccttgac gacaatgaca tccttaaaca atgttgccaa cacgtcggcg acattaacga 4921 cgtccaatgg tggtggtatc ccagtggcag catcaacagc tcctgcaccc gctacgccaa 4981 cgatgggcgt cattgtcagc agcaacccct tgactatacc cagcaagtca tcaacctttg 5041 attaccttta cgaattctca gaaacgcgca aggtactcga agagtttttc aagtgcccct 5101 ctaacgatga caagcccatc atagagaata gcagtgatgt cgatagtatc gacatacaat 5161 atgaattcca cagcaatctc actcgtggtg acattgagga ggatgaaggc gatggcgatg 5221 tggaggccga tgacgatgaa gatgaaatcc aattggatgg tgacaatgac gaggacattg 5281 agaataacgg tgatggtgat gcagagacgc cccaacacca ccaacaacag cagcaactgc 5341 atggacacaa tcatcagcag ctgcaacaac aattgcatca acagcacaca cagaacaatc 5401 atcatggcct aaatcatcat tcaagttttc gaaatcacct ccaatcgccc acacaattca 5461 cctatcgtcc atataacgaa gatgatgatg acgatatcga tctggacaat gatggcgggg 5521 tgggtcacca cgaggatggc caacactatc aggatatcca ccaacatcag caacaggaac 5581 aacaagagaa tcatcacaat ttctcattac tgaacaatcg ccacagcaat agtagcagca 5641 cacgccagca caactcacgg cgccacttta ctggcagccc attgatgcgc gattttgatt 5701 tctttttgga ctcggcaagt cgcagtagct gcgaacaaat agatcaacaa atcgatggca 5761 tcaatcacaa tcaaatgaat accggaaatc gacaaaatta tcgctactcc ccagagacaa 5821 ccgattatga ttcaaattgt ggtgatttgg atagtctctc gggtgaaatg aatggcggcg 5881 tatctacttc ctgttccaat tatgctaaat tctatgcatc aagcatgccc gtgctggagg 5941 atggtctttc ctcgggtcac acatctgaca ccgagaacaa taatcagaat aatttgttaa 6001 atcaacaaaa ctctggcata catcacacgc caataggtgg tggcatatct atgttgatgg 6061 atatgaagcg ggtctccacc aacaacagca ttaatagcaa cagtaacagc aaagatggcg 6121 taggcggcag tgtaagcggc ggaagtgtgg ctaatgagaa acagaatgca acaatgtcac 6181 ctaatattct gcatgactcg ttcatgcgta aaaatgagag ccccattaac gggttactgg 6241 acgagagcat gcgcgaagtg gtgcgtgtta agccggacat acgagacaca cgggaacgag 6301 agataatagg acaaagtccc aatgcgatga gcaataacaa agtattcaaa aatattgatc 6361 ctgacttgga ttctttgtat tcgataagtg tgtttcatcg caatgatatg gtgcaaatga 6421 ctcctccacc cccagctcca gcaccacatc gcaagcccaa tgttctgtca gctgagcctg 6481 atattctgca gcccacaccg tacagggacc tgcggcccgg tactaacaat tccaattcac 6541 ccactaaaac caacattact gcaactactt tgacctctag caatagcagt agtaatgcta 6601 tgcagaacaa ctctccgacg caacaagctc aaagtataaa acgtgcagca caacaacaac 6661 aacaagcgcc accaccattg ccagaacgta atgcaccacg ttccccatcg cctgtgatga 6721 attccccagt gtggctctca cgccatctag aggttagttc caacaaaggc cttttagaat 6781 cgccctcaga aaaccattca aaaaatctga gcgccgatga ggatgatgta gatacagact 6841 tggaaacaga tcgcttgctt ggtcaccaac gcctcgatga ccagggctac tatgatgaga 6901 acaagacgtg ggatcggaaa cctacgagat cgttactctc aaagatctct cccaagcagg 6961 tgccaagcac caaaactcgt aatggttaca atgccttact ctcgtccact ccggaaatcc 7021 caccgccagt tccgccaaaa aattcctcca acaaactttt ggacattggt ggttcgattt 7081 cttcgccgga gcacagtgat aaatcgccca taaagtctat agacatacaa gattgtggcc 7141 tcactctcgg ctcccccggc ggttcagtgg gttccggcca aatgaaaaag gacgaaatcg 7201 gaggaggagg cccagccagt ggcaatagca gcaccgccag cggcaacatt gtgaatggcg 7261 gcacgggcaa cgcaggaggc accggcagca gtgttggatc cggtggcagc acaacaggcg 7321 agaaaaaagt taaaaagagc ggtgcagtgc tgatcgaagg tgtcctcttc cgggcaaaat 7381 atttgggctc cactcagttg gtgtgcgagg gccaacccac aaaatccacc cgcatgatgc 7441 aggctgagga ggcagtatca aggataaagg cacctgatgg tgatgtgcaa cccagcacag 7501 aggtggatct gtttatatcc actgaaaaga taatggtcct aaatactgat ctcaaggaga 7561 ttatgatgga tcatgcgtta cgcacaattt cctacatagc cgatattgga gatttggtgg 7621 tattaatggc ccgccgcaga tttgtgcctc aggacatcga tgatgccccc aaaccgaatc 7681 gaacgcccaa aatgatatgt cacgtctttg agagtgacga agcccaattc atagcccaat 7741 cgattgggca agccttccag gtggcctaca tggagttcct taaagcgaat ggaattgaag 7801 atcatcgttt tgttaaggaa atggactacc aggaagttct caatagccag gaaattttcg 7861 gcgatgaatt ggaaatattc gccaagaagg aactacagaa ggaggtggtg gtgcccaagg 7921 ccaagggcga aatattgggt gtagtgattg tcgaatcggg ttggggctct atgctgccca 7981 ctgtagtaat agcgaatctt atgtcctcgg gcgcagcggc tcgttgtggt caattgaata 8041 taggcgatca gctgatagcc atcaatggtc taagcttggt tggcttgcca ttatccacat 8101 gccagactta tataaaaaat accaaaaatc aaactgtggt aaaattcacc gtggtgccat 8161 gtccacctgt ggttgaggtg aaaatcaaga gacccgaaac taaatatcaa cttggtttca 8221 gcgtgcaaaa tggtgtgatt tgtagtttac tacgaggcgg tattgccgaa cgaggaggtg 8281 tccgagtggg ccataggatt attgaaatta ataaccaaag tgtagttgcc gtacctcatg 8341 agaaaattgt aaatctttta gccacgtccg ttggagagat tttaatgaaa accatgccta 8401 catcaatgtt ccgcctatta accggccagg agaatccaat ttatatataa ataaataata 8461 aacaaaattt aaatgcaaac aaatatatat atatatatat atatatatat atatatatat 8521 atatacattt atatatatac aaacaaatga aaaaacaatt aatttttagg agaacatata 8581 accaaaccta aataagtaaa ccaaaattat atacagaaag ttaaaacaaa agcgtaaaca 8641 cactcacaca caaaccagtc aagtaatttg caactctaac tagtctaaat aaaaattaaa 8701 taatttacac taatttatta atgaaagctg taactgtctc tttctattat ctacttatac 8761 ctatatacag tcctctttag aattcatata aaatatttat aaattaaaaa aaaataaaaa 8821 taataaaaga aaaatttgga aaaagaaagc agaagttatt gtaaatcttg atcacataat 8881 tatatatgat ttatatatta aaattattat tatatacaat ttataaatat atataaataa 8941 ctatatacat aactatatat atagaacaag aatacaataa aagatgatga taaaactgtt 9001 aactaattac ttgactaatg tcaatagcag attaattgga aacttttagt attacaacaa 9061 aatacaagaa cacctcccca caataagctc caaacctgtc ctagtcaatg cgctatattg 9121 tctttctgta ttctgtccta atgctattaa attatttact cgtatatcct gtgtttaatg 9181 accactataa ccaaggctat ttattgcaaa aaccgattta aaacgaaaca aacatttatg 9241 tataaccaat tctcttaaat actcagaaac taaacaacaa aaactacaaa aaaaaatata 9301 ttgcatagac gtccatatat agagctacaa cagatcgacc gaacccccga ttcaatatga 9361 aatgctttag taacaatttt gaaaatgtaa ccatttaaat atgtattagg tagttccggt 9421 tctctctaac aagacagaca ctctcacaca cacagagata cacccacaca tgcatataca 9481 tacattccac acaataaaaa ttatatacac ttgtattgat tgattcactc actgattcgt 9541 atgtacttaa actaatacca ttatcaataa ttgaagaaaa aaaggaaata ataagaaaca 9601 aaaccaaaat tgatatgaaa ccaataaaca aacactcgct tgaataatga aaataaataa 9661 aattatttga atttcgatta