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LOCUS XM_059366206 9532 bp mRNA linear INV 02-SEP-2023 (LOC106088904), transcript variant X3, mRNA. ACCESSION XM_059366206 VERSION XM_059366206.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..9532 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..9532 /gene="LOC106088904" /note="uncharacterized LOC106088904; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106088904" CDS 1403..8302 /gene="LOC106088904" /codon_start=1 /product="uncharacterized protein LOC106088904 isoform X1" /protein_id="XP_059222189.1" /db_xref="GeneID:106088904" /translation="MVSTILTTIAAAGQTKSGINNLHSTAPATAATASPERRNQNTTS GTSETTNRSIYYQTSRSVNSSSSASSAGHSSHHHHQQQNNSSVSSPISSKVNSRNSSY SHCQGSRSVQQSHVESKLNGNDCDSVIDYANHNAVKYYQGEQQHQKYLNGKGVNCEGT KFESSSTLSATTTVDLSQALVGSSPPIKDQISLLFPKCRPKQQQSNTTVPVTPSEHQT PGVTPPATDVNTNCGNVDHSNNSVATTLKPRYYSKGAATAPLNGFDSESKEKVTSNHY YRSVNIITQSPPPHSASSISSESLSSVTPRISTNPFLCNTLLTPTAEAEETQKRPAIR EDIAAEDDQKLHNKDVQQKSHSNLKDNGVEDELPVPNYEPFCYHNSSPKSKEKSAPRQ YRDSEQGHRESRSYSDMPRKRSQYERFHHMNGQNYVTEKSYNHINHTEPTQQTNSSHQ QNGHPNPNQNPFVKDNNYWESSRQGNNSNTTPTSTVLNSPEYSGNGVTENEPNRPQHR RSIYQQQQDPSQPQQHPQQQTSCSYMGGGRQHIRLGRSPNGESSYDATQKRNSYNASQ TQNSQNQKSHSNAEAGHKTLAQHYLYGSKTSLHDHIPNQPTEWPEKRESHERASTLMR ERDREREQREQRSKAERYINAALVRESVGEANPPTTLELRDRRDRERERQSYQQQQSQ KYQQKSSSNQYHQQRAAQHHHQQQQQHNQPQRQLTEERLSTTNEVIFDDITENWQNLR VTTDSSQINHNRNSLLAEVKSHNDSSSNTTSTTTLTTSSNLLLSSVPKKSHLLVADVK DDKLQSHSQIQAPKSSHHVPANNCDVDLSSSPSYQEHKKYSEKSHGISVESRHGIIEY EGSPRRIGQMGNTNNDEDHHHRVNSGKTQANVANKTNHHNVISTNPASGTAAAMATTP APATANVASNSPKQHYAARPGFPQRIISPQRETTPPIMLLNYNGKSQQQLQQQHHQQL NSQSLPQHHQHQSPTRDNNAEDTSNDVSEIGTISDLATPEAISHMTATAGGIHMGTVG GGSGGMCESRVSTSPSPPLPSSLDIENGSVSASATTAAPPTATTSMTVSSSSCGTPSS NATTAPPTNTLALTTMTSLNNVANTSATLTTSNGGGIPVAASTAPAPATPTMGVIVSS NPLTIPSKSSTFDYLYEFSETRKVLEEFFKCPSNDDKPIIENSSDVDSIDIQYEFHSN LTRGDIEEDEGDGDVEADDDEDEIQLDGDNDEDIENNGDGDAETPQHHQQQQQLHGHN HQQLQQQLHQQHTQNNHHGLNHHSSFRNHLQSPTQFTYRPYNEDDDDDIDLDNDGGVG HHEDGQHYQDIHQHQQQEQQENHHNFSLLNNRHSNSSSTRQHNSRRHFTGSPLMRDFD FFLDSASRSSCEQIDQQIDGINHNQMNTGNRQNYRYSPETTDYDSNCGDLDSLSGEMN GGVSTSCSNYAKFYASSMPVLEDGLSSGHTSDTENNNQNNLLNQQNSGIHHTPIGGGI SMLMDMKRVSTNNSINSNSNSKDGVGGSVSGGSVANEKQNATMSPNILHDSFMRKNES PINGLLDESMREVVRVKPDIRDTREREIIGQSPNAMSNNKVFKNIDPDLDSLYSISVF HRNDMVQMTPPPPAPAPHRKPNVLSAEPDILQPTPYRDLRPGTNNSNSPTKTNITATT LTSSNSSSNAMQNNSPTQQAQSIKRAAQQQQQAPPPLPERNAPRSPSPVMNSPVWLSR HLEVSSNKGLLESPSENHSKNLSADEDDVDTDLETDRLLGHQRLDDQGYYDENKTWDR KPTRSLLSKISPKQVPSTKTRNGYNALLSSTPEIPPPVPPKNSSNKLLDIGGSISSPE HSDKSPIKSIDIQDCGLTLGSPGGSVGSGQMKKDEIGGGGPASGNSSTASGNIVNGGT GNAGGTGSSVGSGGSTTGEKKVKKSKNKEGGAVLIEGVLFRAKYLGSTQLVCEGQPTK STRMMQAEEAVSRIKAPDGDVQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYI ADIGDLVVLMARRRFVPQDIDDAPKPNRTPKMICHVFESDEAQFIAQSIGQAFQVAYM EFLKANGIEDHRFVKEMDYQEVLNSQEIFGDELEIFAKKELQKEVVVPKAKGEILGVV IVESGWGSMLPTVVIANLMSSGAAARCGQLNIGDQLIAINGLSLVGLPLSTCQTYIKN TKNQTVVKFTVVPCPPVVEVKIKRPETKYQLGFSVQNGVICSLLRGGIAERGGVRVGH RIIEINNQSVVAVPHEKIVNLLATSVGEILMKTMPTSMFRLLTGQENPIYI" polyA_site 9532 /gene="LOC106088904" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ggtgaataaa tgtccacaac cattgacgaa aagttgaaag ttaattaaaa actccgtgtg 61 ttttcacaca aagaagaaag ctttaaaaga atggaaacac aaaattatta gcttggccaa 121 aaattgatta aataaaaagt gaaactaatt ctttaaaacc aaacaaaaaa aaacattaaa 181 agagagttta aacgaaataa taaacttctg ccacaacagt tctcaccaac gaaagtgtaa 241 aacaataaaa ggaagattgc taacataacc ggaagtcgtg ttttgaaaac gtaaaagtaa 301 cggtgaatgt catatataac ctaatgacaa atagcttcag tgtgtgtgcg cgcttatgtt 361 attcgcttta aacccaattt taatcaattc agcagtcttt agtatttgta aacagaagac 421 gataattttt cagattgaag gaaataaacg caaacatgtt ccgcttaact agctccagga 481 aatagtagag cgttgcgttc caaaaacaat tacttgaatc aacaattaac taaataccat 541 gtaacaaaaa tacaaaaaaa aaaacaaaat aaaaaaataa acataaaact atttgagtat 601 aacctgtatc atcaaaatac aaaataaaat tgagttgaca ttttcaatgt tgttattgac 661 ttgttatatt ttttgagaaa ctaataagca agctaacgaa caaatacttt attcatatgt 721 atatgtacat gtatgtatgc caccaaaact atctgtatat gaacaacaca tctatctata 781 ctactattct taccctaaaa acagacattc cagaaccaac ctatcaacca tactgcatta 841 cttgcttagt atgcaatgcc accttcctat cctgccactc tcgtcaatat ttgtttctac 901 tgacaactcc aacaacaaca actccataac taacaactac agctacaata accaatcaaa 961 caccactgta ttgtattctt atcaacttct cctagttgtg tttgtgtttc tttgtgaatg 1021 ccttctgttt ttttgtgtgc gtgagagtgt ttgtctctgt atttgaaaaa gaaaaatcga 1081 aatagccaag aaaggacaca gcttaaatat taattgcata catctctgca attccctgat 1141 gtcctttgtc ccttaacaat tattcaaatt atatccttaa tatttttaaa acttttcccg 1201 aaatataaac aaacaaaaaa caatcgttgt aaaattacaa ttataccaaa atcatcacca 1261 caaaacaaaa aaaataacaa caaaactttt ctaaaatata cacaacaaca ataactatct 1321 aactaactta tctgcaatct ccaatcgtta caatattgag gttcatgtta tccagtaaac 1381 tttaagttaa ttgactacaa taatggtcag cacaatattg acaacaattg ctgctgctgg 1441 acaaacaaaa agtggcatta acaatttgca ttcaactgct cctgcaacag cagcgactgc 1501 ttcaccggag agacgtaatc aaaatacgac aagtggtaca agtgaaacta ccaaccgttc 1561 catatattat cagactagca gatcggtaaa ctcatcctcc tctgcgtcgt cggcgggcca 1621 tagcagtcat catcatcacc agcaacagaa taactcttca gtatcatcgc ccatctccag 1681 caaagtcaac tctcggaata gttcgtattc gcattgccag ggcagtcgca gtgtacaaca 1741 atctcacgta gagagcaaac taaatggcaa cgactgcgac agcgtcatcg attacgccaa 1801 tcacaacgca gtcaagtact accaagggga acaacaacat cagaaatatt tgaatggtaa 1861 gggcgtaaat tgtgaaggca caaagttcga atcgtcatcg acgctttccg ctaccaccac 1921 agtagatctg tcgcaggcat tggtaggctc ctcgccccca attaaagatc aaatttcatt 1981 gttgtttccc aagtgcaggc caaaacagca acagtccaac actacagtcc cagtaacgcc 2041 atcggaacat cagacccccg gtgtgacacc accagccaca gatgttaaca cgaattgcgg 2101 caacgtggac cattcaaaca attcggtggc aactacttta aagcctaggt attactccaa 2161 gggagctgca acagcgcctc tcaacggttt tgattcggaa agcaaggaga aggtgacatc 2221 caatcactat taccgcagtg tgaatatcat tactcagtca ccgccaccac atagtgcgtc 2281 atcgatatcg tcagagtcct tgtcatcggt tacgccacgc atttccacaa acccttttct 2341 gtgcaatact ctcctcactc cgactgccga agcagaagaa acacaaaagc gacccgctat 2401 cagagaagac atcgcggcgg aagacgacca aaagctgcat aataaagacg tacaacaaaa 2461 aagtcactct aatcttaaag acaacggcgt cgaggacgaa ttgccagtgc ctaactacga 2521 acccttttgc taccacaact cgagtcccaa gagtaaggaa aaatcagcac cacgccagta 2581 tcgggattca gagcaaggac atcgcgaatc gcgttcatac agcgatatgc cgcgaaaacg 2641 ttctcaatat gaacgttttc atcatatgaa tggccaaaac tatgtgacgg aaaaatccta 2701 caaccatata aaccacactg agccaacaca acagacgaat agcagccatc agcaaaatgg 2761 tcatccgaat cctaatcaaa atccattcgt caaagacaat aactactggg agtcgtcgcg 2821 acagggaaac aattccaata ccacacccac tagtacggtt ttgaattcgc ctgagtatag 2881 cggcaacggc gtcacggaaa acgaacccaa tcggccccag cacagacggt ccatatacca 2941 gcaacaacag gacccatcgc agcctcagca gcatcctcaa cagcaaacct cgtgctctta 3001 catgggtggt gggcgccaac acatacgcct gggtcgtagt cccaacggtg aatctagtta 3061 tgatgccacc caaaaacgca acagctacaa tgcttctcaa acacaaaaca gtcaaaatca 3121 aaagtcacat tccaatgccg aagcgggaca taagactctg gcccaacatt atctctatgg 3181 aagtaaaact tcgctgcatg atcacatacc caatcagccg actgaatggc ctgaaaaacg 3241 cgagtcccat gaacgtgcgt ccaccctcat gcgagaacgg gatcgtgaac gtgagcaacg 3301 cgaacaacgc agcaaagcag agcgttatat taatgctgct ttagtacggg aatcggtggg 3361 tgaggcgaat cctcccacaa ctttagaatt acgtgataga cgtgaccgcg agcgtgaacg 3421 ccaatcatac cagcagcagc aatcgcaaaa atatcaacaa aagtcctcct caaatcagta 3481 tcaccagcag agggcagctc aacaccatca tcaacagcag caacaacata atcagcccca 3541 gcgtcaattg acggaggaac gtttgtccac cacaaatgaa gtgatattcg atgacattac 3601 tgagaattgg cagaatttac gcgttacaac cgactcatcg caaatcaacc acaatcgcaa 3661 ttcattatta gcggaagtaa aaagccacaa tgactccagc agtaatacaa cgtccactac 3721 gacattaact acatcgtcga atcttttgtt gagcagtgta ccgaaaaagt cccatttatt 3781 ggtggcagat gttaaagatg acaaactcca aagccactca cagatacagg cacctaaatc 3841 gtcccatcat gtgccggcga acaattgcga tgtggacttg tcatcgtcgc cctcctatca 3901 agagcacaaa aagtactcag aaaaaagtca tggaattagt gtagaatcac gtcatggtat 3961 tatagaatac gaaggttccc ccagacgcat tggacaaatg ggcaacacaa ataacgatga 4021 ggatcatcat caccgggtaa acagtggtaa aacccaagca aatgttgcaa ataaaaccaa 4081 tcatcataat gtcatctcca ccaaccccgc ctcagggacg gcggcagcta tggccaccac 4141 accagcgcca gcgacagcaa atgtggcaag caattctccc aagcagcact atgcggccag 4201 accaggtttt ccacagcgta tcatatcccc acaacgtgag acaactccac cgattatgct 4261 gctaaattac aatggcaaaa gtcaacagca gctgcagcag caacaccatc agcaattgaa 4321 ttcccaatcg ttgcctcaac accaccagca tcagtcgcca acgagggaca acaatgccga 4381 agataccagc aatgatgtat cggaaattgg cacaatatct gacctggcaa cgccagaggc 4441 cattagccat atgacagcga cggcgggtgg catacacatg ggaacggtcg gcggcggcag 4501 cggtggcatg tgcgaaagtc gtgtctccac atcaccctcg ccaccattgc catcctcatt 4561 ggatatagaa aatggttcgg tgtcggcatc agccactact gcagcacccc cgactgccac 4621 aacatcaatg acagtcagtt ccagctcatg cggcacccct tcgagcaatg caaccacagc 4681 gccacccacc aacactttag ccttgacgac aatgacatcc ttaaacaatg ttgccaacac 4741 gtcggcgaca ttaacgacgt ccaatggtgg tggtatccca gtggcagcat caacagctcc 4801 tgcacccgct acgccaacga tgggcgtcat tgtcagcagc aaccccttga ctatacccag 4861 caagtcatca acctttgatt acctttacga attctcagaa acgcgcaagg tactcgaaga 4921 gtttttcaag tgcccctcta acgatgacaa gcccatcata gagaatagca gtgatgtcga 4981 tagtatcgac atacaatatg aattccacag caatctcact cgtggtgaca ttgaggagga 5041 tgaaggcgat ggcgatgtgg aggccgatga cgatgaagat gaaatccaat tggatggtga 5101 caatgacgag gacattgaga ataacggtga tggtgatgca gagacgcccc aacaccacca 5161 acaacagcag caactgcatg gacacaatca tcagcagctg caacaacaat tgcatcaaca 5221 gcacacacag aacaatcatc atggcctaaa tcatcattca agttttcgaa atcacctcca 5281 atcgcccaca caattcacct atcgtccata taacgaagat gatgatgacg atatcgatct 5341 ggacaatgat ggcggggtgg gtcaccacga ggatggccaa cactatcagg atatccacca 5401 acatcagcaa caggaacaac aagagaatca tcacaatttc tcattactga acaatcgcca 5461 cagcaatagt agcagcacac gccagcacaa ctcacggcgc cactttactg gcagcccatt 5521 gatgcgcgat tttgatttct ttttggactc ggcaagtcgc agtagctgcg aacaaataga 5581 tcaacaaatc gatggcatca atcacaatca aatgaatacc ggaaatcgac aaaattatcg 5641 ctactcccca gagacaaccg attatgattc aaattgtggt gatttggata gtctctcggg 5701 tgaaatgaat ggcggcgtat ctacttcctg ttccaattat gctaaattct atgcatcaag 5761 catgcccgtg ctggaggatg gtctttcctc gggtcacaca tctgacaccg agaacaataa 5821 tcagaataat ttgttaaatc aacaaaactc tggcatacat cacacgccaa taggtggtgg 5881 catatctatg ttgatggata tgaagcgggt ctccaccaac aacagcatta atagcaacag 5941 taacagcaaa gatggcgtag gcggcagtgt aagcggcgga agtgtggcta atgagaaaca 6001 gaatgcaaca atgtcaccta atattctgca tgactcgttc atgcgtaaaa atgagagccc 6061 cattaacggg ttactggacg agagcatgcg cgaagtggtg cgtgttaagc cggacatacg 6121 agacacacgg gaacgagaga taataggaca aagtcccaat gcgatgagca ataacaaagt 6181 attcaaaaat attgatcctg acttggattc tttgtattcg ataagtgtgt ttcatcgcaa 6241 tgatatggtg caaatgactc ctccaccccc agctccagca ccacatcgca agcccaatgt 6301 tctgtcagct gagcctgata ttctgcagcc cacaccgtac agggacctgc ggcccggtac 6361 taacaattcc aattcaccca ctaaaaccaa cattactgca actactttga cctctagcaa 6421 tagcagtagt aatgctatgc agaacaactc tccgacgcaa caagctcaaa gtataaaacg 6481 tgcagcacaa caacaacaac aagcgccacc accattgcca gaacgtaatg caccacgttc 6541 cccatcgcct gtgatgaatt ccccagtgtg gctctcacgc catctagagg ttagttccaa 6601 caaaggcctt ttagaatcgc cctcagaaaa ccattcaaaa aatctgagcg ccgatgagga 6661 tgatgtagat acagacttgg aaacagatcg cttgcttggt caccaacgcc tcgatgacca 6721 gggctactat gatgagaaca agacgtggga tcggaaacct acgagatcgt tactctcaaa 6781 gatctctccc aagcaggtgc caagcaccaa aactcgtaat ggttacaatg ccttactctc 6841 gtccactccg gaaatcccac cgccagttcc gccaaaaaat tcctccaaca aacttttgga 6901 cattggtggt tcgatttctt cgccggagca cagtgataaa tcgcccataa agtctataga 6961 catacaagat tgtggcctca ctctcggctc ccccggcggt tcagtgggtt ccggccaaat 7021 gaaaaaggac gaaatcggag gaggaggccc agccagtggc aatagcagca ccgccagcgg 7081 caacattgtg aatggcggca cgggcaacgc aggaggcacc ggcagcagtg ttggatccgg 7141 tggcagcaca acaggcgaga aaaaagttaa aaagagtaag aacaaagaag gcggtgcagt 7201 gctgatcgaa ggtgtcctct tccgggcaaa atatttgggc tccactcagt tggtgtgcga 7261 gggccaaccc acaaaatcca cccgcatgat gcaggctgag gaggcagtat caaggataaa 7321 ggcacctgat ggtgatgtgc aacccagcac agaggtggat ctgtttatat ccactgaaaa 7381 gataatggtc ctaaatactg atctcaagga gattatgatg gatcatgcgt tacgcacaat 7441 ttcctacata gccgatattg gagatttggt ggtattaatg gcccgccgca gatttgtgcc 7501 tcaggacatc gatgatgccc ccaaaccgaa tcgaacgccc aaaatgatat gtcacgtctt 7561 tgagagtgac gaagcccaat tcatagccca atcgattggg caagccttcc aggtggccta 7621 catggagttc cttaaagcga atggaattga agatcatcgt tttgttaagg aaatggacta 7681 ccaggaagtt ctcaatagcc aggaaatttt cggcgatgaa ttggaaatat tcgccaagaa 7741 ggaactacag aaggaggtgg tggtgcccaa ggccaagggc gaaatattgg gtgtagtgat 7801 tgtcgaatcg ggttggggct ctatgctgcc cactgtagta atagcgaatc ttatgtcctc 7861 gggcgcagcg gctcgttgtg gtcaattgaa tataggcgat cagctgatag ccatcaatgg 7921 tctaagcttg gttggcttgc cattatccac atgccagact tatataaaaa ataccaaaaa 7981 tcaaactgtg gtaaaattca ccgtggtgcc atgtccacct gtggttgagg tgaaaatcaa 8041 gagacccgaa actaaatatc aacttggttt cagcgtgcaa aatggtgtga tttgtagttt 8101 actacgaggc ggtattgccg aacgaggagg tgtccgagtg ggccatagga ttattgaaat 8161 taataaccaa agtgtagttg ccgtacctca tgagaaaatt gtaaatcttt tagccacgtc 8221 cgttggagag attttaatga aaaccatgcc tacatcaatg ttccgcctat taaccggcca 8281 ggagaatcca atttatatat aaataaataa taaacaaaat ttaaatgcaa acaaatatat 8341 atatatatat atatatatat atatatatat atatatacat ttatatatat acaaacaaat 8401 gaaaaaacaa ttaattttta ggagaacata taaccaaacc taaataagta aaccaaaatt 8461 atatacagaa agttaaaaca aaagcgtaaa cacactcaca cacaaaccag tcaagtaatt 8521 tgcaactcta actagtctaa ataaaaatta aataatttac actaatttat taatgaaagc 8581 tgtaactgtc tctttctatt atctacttat acctatatac agtcctcttt agaattcata 8641 taaaatattt ataaattaaa aaaaaataaa aataataaaa gaaaaatttg gaaaaagaaa 8701 gcagaagtta ttgtaaatct tgatcacata attatatatg atttatatat taaaattatt 8761 attatataca atttataaat atatataaat aactatatac ataactatat atatagaaca 8821 agaatacaat aaaagatgat gataaaactg ttaactaatt acttgactaa tgtcaatagc 8881 agattaattg gaaactttta gtattacaac aaaatacaag aacacctccc cacaataagc 8941 tccaaacctg tcctagtcaa tgcgctatat tgtctttctg tattctgtcc taatgctatt 9001 aaattattta ctcgtatatc ctgtgtttaa tgaccactat aaccaaggct atttattgca 9061 aaaaccgatt taaaacgaaa caaacattta tgtataacca attctcttaa atactcagaa 9121 actaaacaac aaaaactaca aaaaaaaata tattgcatag acgtccatat atagagctac 9181 aacagatcga ccgaaccccc gattcaatat gaaatgcttt agtaacaatt ttgaaaatgt 9241 aaccatttaa atatgtatta ggtagttccg gttctctcta acaagacaga cactctcaca 9301 cacacagaga tacacccaca catgcatata catacattcc acacaataaa aattatatac 9361 acttgtattg attgattcac tcactgattc gtatgtactt aaactaatac cattatcaat 9421 aattgaagaa aaaaaggaaa taataagaaa caaaaccaaa attgatatga aaccaataaa 9481 caaacactcg cttgaataat gaaaataaat aaaattattt gaatttcgat ta