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LOCUS XM_059366205 9374 bp mRNA linear INV 02-SEP-2023 (LOC106088904), transcript variant X2, mRNA. ACCESSION XM_059366205 VERSION XM_059366205.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..9374 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..9374 /gene="LOC106088904" /note="uncharacterized LOC106088904; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106088904" CDS 1245..8144 /gene="LOC106088904" /codon_start=1 /product="uncharacterized protein LOC106088904 isoform X1" /protein_id="XP_059222188.1" /db_xref="GeneID:106088904" /translation="MVSTILTTIAAAGQTKSGINNLHSTAPATAATASPERRNQNTTS GTSETTNRSIYYQTSRSVNSSSSASSAGHSSHHHHQQQNNSSVSSPISSKVNSRNSSY SHCQGSRSVQQSHVESKLNGNDCDSVIDYANHNAVKYYQGEQQHQKYLNGKGVNCEGT KFESSSTLSATTTVDLSQALVGSSPPIKDQISLLFPKCRPKQQQSNTTVPVTPSEHQT PGVTPPATDVNTNCGNVDHSNNSVATTLKPRYYSKGAATAPLNGFDSESKEKVTSNHY YRSVNIITQSPPPHSASSISSESLSSVTPRISTNPFLCNTLLTPTAEAEETQKRPAIR EDIAAEDDQKLHNKDVQQKSHSNLKDNGVEDELPVPNYEPFCYHNSSPKSKEKSAPRQ YRDSEQGHRESRSYSDMPRKRSQYERFHHMNGQNYVTEKSYNHINHTEPTQQTNSSHQ QNGHPNPNQNPFVKDNNYWESSRQGNNSNTTPTSTVLNSPEYSGNGVTENEPNRPQHR RSIYQQQQDPSQPQQHPQQQTSCSYMGGGRQHIRLGRSPNGESSYDATQKRNSYNASQ TQNSQNQKSHSNAEAGHKTLAQHYLYGSKTSLHDHIPNQPTEWPEKRESHERASTLMR ERDREREQREQRSKAERYINAALVRESVGEANPPTTLELRDRRDRERERQSYQQQQSQ KYQQKSSSNQYHQQRAAQHHHQQQQQHNQPQRQLTEERLSTTNEVIFDDITENWQNLR VTTDSSQINHNRNSLLAEVKSHNDSSSNTTSTTTLTTSSNLLLSSVPKKSHLLVADVK DDKLQSHSQIQAPKSSHHVPANNCDVDLSSSPSYQEHKKYSEKSHGISVESRHGIIEY EGSPRRIGQMGNTNNDEDHHHRVNSGKTQANVANKTNHHNVISTNPASGTAAAMATTP APATANVASNSPKQHYAARPGFPQRIISPQRETTPPIMLLNYNGKSQQQLQQQHHQQL NSQSLPQHHQHQSPTRDNNAEDTSNDVSEIGTISDLATPEAISHMTATAGGIHMGTVG GGSGGMCESRVSTSPSPPLPSSLDIENGSVSASATTAAPPTATTSMTVSSSSCGTPSS NATTAPPTNTLALTTMTSLNNVANTSATLTTSNGGGIPVAASTAPAPATPTMGVIVSS NPLTIPSKSSTFDYLYEFSETRKVLEEFFKCPSNDDKPIIENSSDVDSIDIQYEFHSN LTRGDIEEDEGDGDVEADDDEDEIQLDGDNDEDIENNGDGDAETPQHHQQQQQLHGHN HQQLQQQLHQQHTQNNHHGLNHHSSFRNHLQSPTQFTYRPYNEDDDDDIDLDNDGGVG HHEDGQHYQDIHQHQQQEQQENHHNFSLLNNRHSNSSSTRQHNSRRHFTGSPLMRDFD FFLDSASRSSCEQIDQQIDGINHNQMNTGNRQNYRYSPETTDYDSNCGDLDSLSGEMN GGVSTSCSNYAKFYASSMPVLEDGLSSGHTSDTENNNQNNLLNQQNSGIHHTPIGGGI SMLMDMKRVSTNNSINSNSNSKDGVGGSVSGGSVANEKQNATMSPNILHDSFMRKNES PINGLLDESMREVVRVKPDIRDTREREIIGQSPNAMSNNKVFKNIDPDLDSLYSISVF HRNDMVQMTPPPPAPAPHRKPNVLSAEPDILQPTPYRDLRPGTNNSNSPTKTNITATT LTSSNSSSNAMQNNSPTQQAQSIKRAAQQQQQAPPPLPERNAPRSPSPVMNSPVWLSR HLEVSSNKGLLESPSENHSKNLSADEDDVDTDLETDRLLGHQRLDDQGYYDENKTWDR KPTRSLLSKISPKQVPSTKTRNGYNALLSSTPEIPPPVPPKNSSNKLLDIGGSISSPE HSDKSPIKSIDIQDCGLTLGSPGGSVGSGQMKKDEIGGGGPASGNSSTASGNIVNGGT GNAGGTGSSVGSGGSTTGEKKVKKSKNKEGGAVLIEGVLFRAKYLGSTQLVCEGQPTK STRMMQAEEAVSRIKAPDGDVQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYI ADIGDLVVLMARRRFVPQDIDDAPKPNRTPKMICHVFESDEAQFIAQSIGQAFQVAYM EFLKANGIEDHRFVKEMDYQEVLNSQEIFGDELEIFAKKELQKEVVVPKAKGEILGVV IVESGWGSMLPTVVIANLMSSGAAARCGQLNIGDQLIAINGLSLVGLPLSTCQTYIKN TKNQTVVKFTVVPCPPVVEVKIKRPETKYQLGFSVQNGVICSLLRGGIAERGGVRVGH RIIEINNQSVVAVPHEKIVNLLATSVGEILMKTMPTSMFRLLTGQENPIYI" polyA_site 9374 /gene="LOC106088904" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaacgtattc aaacgcgcta gcagtgaaaa cgttgttgca ttaaatgtga ataccacaag 61 agagtgaaaa agagaaaata tttatattta tcaaacgagt gaatgaataa aaaggataac 121 aaaatggaaa ttataaaaaa gaaaaaataa ataaaaacag cccagtgctt taaggtgcag 181 tagaggcgaa tgaggcccct ctttaaaaaa aaacacaaca gaaagcaatc tgtcagaaag 241 tgagaaaaaa gtaatggaaa cacaaaatta ttagcttggc caaaaattga ttaaataaaa 301 agtgaaacta attctttaaa accaaacaaa aaaaaacatt aaaagagagt ttaaacgaaa 361 taataaactt ctgccacaac agttctcacc aacgaaagtg taaaacaata aaaggaagat 421 tgctaacata accggaagtc gtgttttgaa aacgtaaaag taacggtgaa tgtcatatat 481 aacctaatga caaatagctt cagtgtgtgt gcgcgcttat gttattcgct ttaaacccaa 541 ttttaatcaa ttcagcagtc tttagtattt gtaaacagaa gacgataatt tttcagattg 601 aaggaaataa acgcaaacat gttccgctta actagctcca ggaaatacat tccagaacca 661 acctatcaac catactgcat tacttgctta gtatgcaatg ccaccttcct atcctgccac 721 tctcgtcaat atttgtttct actgacaact ccaacaacaa caactccata actaacaact 781 acagctacaa taaccaatca aacaccactg tattgtattc ttatcaactt ctcctagttg 841 tgtttgtgtt tctttgtgaa tgccttctgt ttttttgtgt gcgtgagagt gtttgtctct 901 gtatttgaaa aagaaaaatc gaaatagcca agaaaggaca cagcttaaat attaattgca 961 tacatctctg caattccctg atgtcctttg tcccttaaca attattcaaa ttatatcctt 1021 aatattttta aaacttttcc cgaaatataa acaaacaaaa aacaatcgtt gtaaaattac 1081 aattatacca aaatcatcac cacaaaacaa aaaaaataac aacaaaactt ttctaaaata 1141 tacacaacaa caataactat ctaactaact tatctgcaat ctccaatcgt tacaatattg 1201 aggttcatgt tatccagtaa actttaagtt aattgactac aataatggtc agcacaatat 1261 tgacaacaat tgctgctgct ggacaaacaa aaagtggcat taacaatttg cattcaactg 1321 ctcctgcaac agcagcgact gcttcaccgg agagacgtaa tcaaaatacg acaagtggta 1381 caagtgaaac taccaaccgt tccatatatt atcagactag cagatcggta aactcatcct 1441 cctctgcgtc gtcggcgggc catagcagtc atcatcatca ccagcaacag aataactctt 1501 cagtatcatc gcccatctcc agcaaagtca actctcggaa tagttcgtat tcgcattgcc 1561 agggcagtcg cagtgtacaa caatctcacg tagagagcaa actaaatggc aacgactgcg 1621 acagcgtcat cgattacgcc aatcacaacg cagtcaagta ctaccaaggg gaacaacaac 1681 atcagaaata tttgaatggt aagggcgtaa attgtgaagg cacaaagttc gaatcgtcat 1741 cgacgctttc cgctaccacc acagtagatc tgtcgcaggc attggtaggc tcctcgcccc 1801 caattaaaga tcaaatttca ttgttgtttc ccaagtgcag gccaaaacag caacagtcca 1861 acactacagt cccagtaacg ccatcggaac atcagacccc cggtgtgaca ccaccagcca 1921 cagatgttaa cacgaattgc ggcaacgtgg accattcaaa caattcggtg gcaactactt 1981 taaagcctag gtattactcc aagggagctg caacagcgcc tctcaacggt tttgattcgg 2041 aaagcaagga gaaggtgaca tccaatcact attaccgcag tgtgaatatc attactcagt 2101 caccgccacc acatagtgcg tcatcgatat cgtcagagtc cttgtcatcg gttacgccac 2161 gcatttccac aaaccctttt ctgtgcaata ctctcctcac tccgactgcc gaagcagaag 2221 aaacacaaaa gcgacccgct atcagagaag acatcgcggc ggaagacgac caaaagctgc 2281 ataataaaga cgtacaacaa aaaagtcact ctaatcttaa agacaacggc gtcgaggacg 2341 aattgccagt gcctaactac gaaccctttt gctaccacaa ctcgagtccc aagagtaagg 2401 aaaaatcagc accacgccag tatcgggatt cagagcaagg acatcgcgaa tcgcgttcat 2461 acagcgatat gccgcgaaaa cgttctcaat atgaacgttt tcatcatatg aatggccaaa 2521 actatgtgac ggaaaaatcc tacaaccata taaaccacac tgagccaaca caacagacga 2581 atagcagcca tcagcaaaat ggtcatccga atcctaatca aaatccattc gtcaaagaca 2641 ataactactg ggagtcgtcg cgacagggaa acaattccaa taccacaccc actagtacgg 2701 ttttgaattc gcctgagtat agcggcaacg gcgtcacgga aaacgaaccc aatcggcccc 2761 agcacagacg gtccatatac cagcaacaac aggacccatc gcagcctcag cagcatcctc 2821 aacagcaaac ctcgtgctct tacatgggtg gtgggcgcca acacatacgc ctgggtcgta 2881 gtcccaacgg tgaatctagt tatgatgcca cccaaaaacg caacagctac aatgcttctc 2941 aaacacaaaa cagtcaaaat caaaagtcac attccaatgc cgaagcggga cataagactc 3001 tggcccaaca ttatctctat ggaagtaaaa cttcgctgca tgatcacata cccaatcagc 3061 cgactgaatg gcctgaaaaa cgcgagtccc atgaacgtgc gtccaccctc atgcgagaac 3121 gggatcgtga acgtgagcaa cgcgaacaac gcagcaaagc agagcgttat attaatgctg 3181 ctttagtacg ggaatcggtg ggtgaggcga atcctcccac aactttagaa ttacgtgata 3241 gacgtgaccg cgagcgtgaa cgccaatcat accagcagca gcaatcgcaa aaatatcaac 3301 aaaagtcctc ctcaaatcag tatcaccagc agagggcagc tcaacaccat catcaacagc 3361 agcaacaaca taatcagccc cagcgtcaat tgacggagga acgtttgtcc accacaaatg 3421 aagtgatatt cgatgacatt actgagaatt ggcagaattt acgcgttaca accgactcat 3481 cgcaaatcaa ccacaatcgc aattcattat tagcggaagt aaaaagccac aatgactcca 3541 gcagtaatac aacgtccact acgacattaa ctacatcgtc gaatcttttg ttgagcagtg 3601 taccgaaaaa gtcccattta ttggtggcag atgttaaaga tgacaaactc caaagccact 3661 cacagataca ggcacctaaa tcgtcccatc atgtgccggc gaacaattgc gatgtggact 3721 tgtcatcgtc gccctcctat caagagcaca aaaagtactc agaaaaaagt catggaatta 3781 gtgtagaatc acgtcatggt attatagaat acgaaggttc ccccagacgc attggacaaa 3841 tgggcaacac aaataacgat gaggatcatc atcaccgggt aaacagtggt aaaacccaag 3901 caaatgttgc aaataaaacc aatcatcata atgtcatctc caccaacccc gcctcaggga 3961 cggcggcagc tatggccacc acaccagcgc cagcgacagc aaatgtggca agcaattctc 4021 ccaagcagca ctatgcggcc agaccaggtt ttccacagcg tatcatatcc ccacaacgtg 4081 agacaactcc accgattatg ctgctaaatt acaatggcaa aagtcaacag cagctgcagc 4141 agcaacacca tcagcaattg aattcccaat cgttgcctca acaccaccag catcagtcgc 4201 caacgaggga caacaatgcc gaagatacca gcaatgatgt atcggaaatt ggcacaatat 4261 ctgacctggc aacgccagag gccattagcc atatgacagc gacggcgggt ggcatacaca 4321 tgggaacggt cggcggcggc agcggtggca tgtgcgaaag tcgtgtctcc acatcaccct 4381 cgccaccatt gccatcctca ttggatatag aaaatggttc ggtgtcggca tcagccacta 4441 ctgcagcacc cccgactgcc acaacatcaa tgacagtcag ttccagctca tgcggcaccc 4501 cttcgagcaa tgcaaccaca gcgccaccca ccaacacttt agccttgacg acaatgacat 4561 ccttaaacaa tgttgccaac acgtcggcga cattaacgac gtccaatggt ggtggtatcc 4621 cagtggcagc atcaacagct cctgcacccg ctacgccaac gatgggcgtc attgtcagca 4681 gcaacccctt gactataccc agcaagtcat caacctttga ttacctttac gaattctcag 4741 aaacgcgcaa ggtactcgaa gagtttttca agtgcccctc taacgatgac aagcccatca 4801 tagagaatag cagtgatgtc gatagtatcg acatacaata tgaattccac agcaatctca 4861 ctcgtggtga cattgaggag gatgaaggcg atggcgatgt ggaggccgat gacgatgaag 4921 atgaaatcca attggatggt gacaatgacg aggacattga gaataacggt gatggtgatg 4981 cagagacgcc ccaacaccac caacaacagc agcaactgca tggacacaat catcagcagc 5041 tgcaacaaca attgcatcaa cagcacacac agaacaatca tcatggccta aatcatcatt 5101 caagttttcg aaatcacctc caatcgccca cacaattcac ctatcgtcca tataacgaag 5161 atgatgatga cgatatcgat ctggacaatg atggcggggt gggtcaccac gaggatggcc 5221 aacactatca ggatatccac caacatcagc aacaggaaca acaagagaat catcacaatt 5281 tctcattact gaacaatcgc cacagcaata gtagcagcac acgccagcac aactcacggc 5341 gccactttac tggcagccca ttgatgcgcg attttgattt ctttttggac tcggcaagtc 5401 gcagtagctg cgaacaaata gatcaacaaa tcgatggcat caatcacaat caaatgaata 5461 ccggaaatcg acaaaattat cgctactccc cagagacaac cgattatgat tcaaattgtg 5521 gtgatttgga tagtctctcg ggtgaaatga atggcggcgt atctacttcc tgttccaatt 5581 atgctaaatt ctatgcatca agcatgcccg tgctggagga tggtctttcc tcgggtcaca 5641 catctgacac cgagaacaat aatcagaata atttgttaaa tcaacaaaac tctggcatac 5701 atcacacgcc aataggtggt ggcatatcta tgttgatgga tatgaagcgg gtctccacca 5761 acaacagcat taatagcaac agtaacagca aagatggcgt aggcggcagt gtaagcggcg 5821 gaagtgtggc taatgagaaa cagaatgcaa caatgtcacc taatattctg catgactcgt 5881 tcatgcgtaa aaatgagagc cccattaacg ggttactgga cgagagcatg cgcgaagtgg 5941 tgcgtgttaa gccggacata cgagacacac gggaacgaga gataatagga caaagtccca 6001 atgcgatgag caataacaaa gtattcaaaa atattgatcc tgacttggat tctttgtatt 6061 cgataagtgt gtttcatcgc aatgatatgg tgcaaatgac tcctccaccc ccagctccag 6121 caccacatcg caagcccaat gttctgtcag ctgagcctga tattctgcag cccacaccgt 6181 acagggacct gcggcccggt actaacaatt ccaattcacc cactaaaacc aacattactg 6241 caactacttt gacctctagc aatagcagta gtaatgctat gcagaacaac tctccgacgc 6301 aacaagctca aagtataaaa cgtgcagcac aacaacaaca acaagcgcca ccaccattgc 6361 cagaacgtaa tgcaccacgt tccccatcgc ctgtgatgaa ttccccagtg tggctctcac 6421 gccatctaga ggttagttcc aacaaaggcc ttttagaatc gccctcagaa aaccattcaa 6481 aaaatctgag cgccgatgag gatgatgtag atacagactt ggaaacagat cgcttgcttg 6541 gtcaccaacg cctcgatgac cagggctact atgatgagaa caagacgtgg gatcggaaac 6601 ctacgagatc gttactctca aagatctctc ccaagcaggt gccaagcacc aaaactcgta 6661 atggttacaa tgccttactc tcgtccactc cggaaatccc accgccagtt ccgccaaaaa 6721 attcctccaa caaacttttg gacattggtg gttcgatttc ttcgccggag cacagtgata 6781 aatcgcccat aaagtctata gacatacaag attgtggcct cactctcggc tcccccggcg 6841 gttcagtggg ttccggccaa atgaaaaagg acgaaatcgg aggaggaggc ccagccagtg 6901 gcaatagcag caccgccagc ggcaacattg tgaatggcgg cacgggcaac gcaggaggca 6961 ccggcagcag tgttggatcc ggtggcagca caacaggcga gaaaaaagtt aaaaagagta 7021 agaacaaaga aggcggtgca gtgctgatcg aaggtgtcct cttccgggca aaatatttgg 7081 gctccactca gttggtgtgc gagggccaac ccacaaaatc cacccgcatg atgcaggctg 7141 aggaggcagt atcaaggata aaggcacctg atggtgatgt gcaacccagc acagaggtgg 7201 atctgtttat atccactgaa aagataatgg tcctaaatac tgatctcaag gagattatga 7261 tggatcatgc gttacgcaca atttcctaca tagccgatat tggagatttg gtggtattaa 7321 tggcccgccg cagatttgtg cctcaggaca tcgatgatgc ccccaaaccg aatcgaacgc 7381 ccaaaatgat atgtcacgtc tttgagagtg acgaagccca attcatagcc caatcgattg 7441 ggcaagcctt ccaggtggcc tacatggagt tccttaaagc gaatggaatt gaagatcatc 7501 gttttgttaa ggaaatggac taccaggaag ttctcaatag ccaggaaatt ttcggcgatg 7561 aattggaaat attcgccaag aaggaactac agaaggaggt ggtggtgccc aaggccaagg 7621 gcgaaatatt gggtgtagtg attgtcgaat cgggttgggg ctctatgctg cccactgtag 7681 taatagcgaa tcttatgtcc tcgggcgcag cggctcgttg tggtcaattg aatataggcg 7741 atcagctgat agccatcaat ggtctaagct tggttggctt gccattatcc acatgccaga 7801 cttatataaa aaataccaaa aatcaaactg tggtaaaatt caccgtggtg ccatgtccac 7861 ctgtggttga ggtgaaaatc aagagacccg aaactaaata tcaacttggt ttcagcgtgc 7921 aaaatggtgt gatttgtagt ttactacgag gcggtattgc cgaacgagga ggtgtccgag 7981 tgggccatag gattattgaa attaataacc aaagtgtagt tgccgtacct catgagaaaa 8041 ttgtaaatct tttagccacg tccgttggag agattttaat gaaaaccatg cctacatcaa 8101 tgttccgcct attaaccggc caggagaatc caatttatat ataaataaat aataaacaaa 8161 atttaaatgc aaacaaatat atatatatat atatatatat atatatatat atatatatac 8221 atttatatat atacaaacaa atgaaaaaac aattaatttt taggagaaca tataaccaaa 8281 cctaaataag taaaccaaaa ttatatacag aaagttaaaa caaaagcgta aacacactca 8341 cacacaaacc agtcaagtaa tttgcaactc taactagtct aaataaaaat taaataattt 8401 acactaattt attaatgaaa gctgtaactg tctctttcta ttatctactt atacctatat 8461 acagtcctct ttagaattca tataaaatat ttataaatta aaaaaaaata aaaataataa 8521 aagaaaaatt tggaaaaaga aagcagaagt tattgtaaat cttgatcaca taattatata 8581 tgatttatat attaaaatta ttattatata caatttataa atatatataa ataactatat 8641 acataactat atatatagaa caagaataca ataaaagatg atgataaaac tgttaactaa 8701 ttacttgact aatgtcaata gcagattaat tggaaacttt tagtattaca acaaaataca 8761 agaacacctc cccacaataa gctccaaacc tgtcctagtc aatgcgctat attgtctttc 8821 tgtattctgt cctaatgcta ttaaattatt tactcgtata tcctgtgttt aatgaccact 8881 ataaccaagg ctatttattg caaaaaccga tttaaaacga aacaaacatt tatgtataac 8941 caattctctt aaatactcag aaactaaaca acaaaaacta caaaaaaaaa tatattgcat 9001 agacgtccat atatagagct acaacagatc gaccgaaccc ccgattcaat atgaaatgct 9061 ttagtaacaa ttttgaaaat gtaaccattt aaatatgtat taggtagttc cggttctctc 9121 taacaagaca gacactctca cacacacaga gatacaccca cacatgcata tacatacatt 9181 ccacacaata aaaattatat acacttgtat tgattgattc actcactgat tcgtatgtac 9241 ttaaactaat accattatca ataattgaag aaaaaaagga aataataaga aacaaaacca 9301 aaattgatat gaaaccaata aacaaacact cgcttgaata atgaaaataa ataaaattat 9361 ttgaatttcg atta