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LOCUS XM_059366198 3778 bp mRNA linear INV 02-SEP-2023 subunit B1 (LOC106092761), transcript variant X6, mRNA. ACCESSION XM_059366198 VERSION XM_059366198.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3778 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3778 /gene="LOC106092761" /note="katanin p80 WD40 repeat-containing subunit B1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106092761" CDS 852..3065 /gene="LOC106092761" /codon_start=1 /product="katanin p80 WD40 repeat-containing subunit B1 isoform X5" /protein_id="XP_059222181.1" /db_xref="GeneID:106092761" /translation="MALARKLTERIYEIKAHNGNVTCLDVGETGRVLVTGGNDRNVNL WAIGQTECFMSLTGHNRPIDCVRFAYNDDFVYSADDIGIIRRWDLNAQTICSTLNGHM KSVRTLDFNPSGEYVVSGSNDTTVRLWDVRNQNNCMKIYRGHISHVNSVKFSPDGLWI ASAGTEGSVIIWDIRKSKQIMEFCDKPAGAAITCIQFHPFEFLLAVGRVDGTVSIFDL ETKLCVTRTDATSLFYGHPIKCITFSDNGECLFVGTAAAISIIGWEPDREFDHIQSAW TALGDMKIVNRRLICGSHEQEYVSIDALSVNRVFPFYNPSNNTTPAFSHNSTTRKSFS RGNQKLRLSIGGTKPSRLVEENEENRSPSLDGHSSPNLSLELVDENPLENAIHSPMLP NANTHPLNNGHHGNHSVNSNFTDFENSFTSMSGSSVSINVPLKKTASPSPYHYPSIAS STAYSSLGVLNFDGPSSLKMPGERGDLYHKYDHYTDPFNQDSEINFNESFPPVINNYD NTEMVEDFPINQGSTIPPGSVANSSTGPANGASSNSIPISYRADPSLLTHTGFNQKSF NNRMDDVPEIEMLSATHEQVYQELSNRNATLQIIRNSTRSHDVLSALRQAIKMGRTIF VDLLGAILEKTSSWNLDLCILLLPEIYELLQSQHKFHYTRACDTLRVILSNFLPIIQD NLDPWVNGLGVDVSREERHRKCLECQRWLLQIRNLPESNHFGSTLTQLQNMIVNI" polyA_site 3778 /gene="LOC106092761" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tatatatata tatatatata tatacaattg aaatatacgc gtatgtaaat tttgcattgt 61 tcagtgcttc atttataaaa ttcgatcaac attaaaagtg attttaatgt acgcgatgtg 121 ctgtcacaag tgaaaaaatt gaatagtgtc tgtctatgtg tccattaatt cagcggagtc 181 gctagtttgc taatttaaaa cgaatatcaa aaagtaaaga aggaaattca ctttgggcta 241 aaagagaaat tggggaaaat acaataaaac ctcaaaataa atgaaacatc cgcacatccg 301 catactgttc tggtatacat aggtgtaaaa ataatacaat tgaagtgata agtaaaaaga 361 gaaaaaatcc aattgcagca agtagcgtcg tcagtttgct tgctttcgac aaatgtaaaa 421 aattcttgtg ctaatttggt tcgaagatct aaatgtggca ggcatatcta tgtagaagca 481 ttcagtgctc taaagtttta aagtaaacga ataagcaaaa atttataata gtatccccaa 541 tttcccatgt ccaatcaata tacctacagc ttaaaagaag aaaaagctat tcgatagtca 601 gtaagtgagt gagtgtgtga atgactaagt gccgacgaaa gagtgaggtg agcgtgacag 661 tgttggcaag agaaaaagcc aaacagctta ataaattcag taaaaaatta caacgcgttt 721 atttacaagg caaaaaaaga atcgacgact ttaccgccgt catcgaagaa tacgccataa 781 aacaacaata aaaggaataa aatataccaa aatacccagt ttaaatccca ataaaaagtg 841 gctaataagt gatggcatta gcgcgtaaat taaccgaaag aatatatgag ataaaagcac 901 ataatggcaa cgtcacttgt ttggatgttg gtgaaacagg ccgtgtttta gttaccggtg 961 gcaatgatcg caatgtcaat ttgtgggcaa taggacaaac agaatgtttt atgtcattga 1021 cgggccacaa ccgacccata gattgtgttc gttttgccta caatgatgac tttgtatatt 1081 ctgctgatga tataggtatc atcaggcggt gggatctaaa tgcccaaaca atatgctcca 1141 cactgaatgg tcatatgaaa agtgtgagga ccttggattt caacccgtca ggagaatatg 1201 ttgtgtccgg aagcaatgac accacagtaa ggctttggga tgtccgaaat caaaacaatt 1261 gcatgaaaat ctatcgtgga cacatctcgc atgtaaattc agtgaaattc tcacccgatg 1321 gcctgtggat tgcatctgct ggtacggagg gctctgtcat tatctgggac atacgaaaga 1381 gcaaacagat tatggaattt tgtgataagc cagctggtgc tgccatcact tgcattcaat 1441 ttcatccatt cgaatttctg ttggctgtgg gccgtgtcga tggcactgtc agcattttcg 1501 atttagaaac aaaactgtgt gttacgcgta cagatgccac aagtctattt tatggccatc 1561 ccattaagtg tataactttt agtgacaatg gcgaatgttt gtttgtcggc actgcagcgg 1621 ctatttcgat tattggttgg gaaccagatc gcgaatttga tcatatacaa tcagcatgga 1681 cagcattggg tgatatgaaa attgttaata ggcgattgat atgtggctcg catgaacagg 1741 agtatgttag cattgatgct cttagtgtaa atcgtgtttt tccgttttac aatccatcca 1801 ataatacaac acctgccttt agtcacaatt ccacaactcg caagagtttt tcgagaggca 1861 atcagaagct gcgtctatcg attggtggaa caaaaccgtc ccggttggtt gaggagaatg 1921 aagaaaaccg tagtcctagt ttagatggtc actcttcgcc gaatcttagt ctagagctgg 1981 tggatgaaaa cccccttgag aatgccatac attcgcctat gttaccaaat gctaacactc 2041 atcctctcaa taatggacat catggcaatc attctgtgaa tagtaatttt acagatttcg 2101 aaaatagttt cacctccatg agtggcagta gtgttagcat caatgtaccc ttaaagaaga 2161 cggcatcgcc gtccccgtat cactatccgt ccatagcttc tagtacagcc tatagcagtt 2221 taggagtttt gaacttcgat ggacccagct cattgaaaat gcccggcgaa cgaggtgatt 2281 tgtatcacaa atacgatcat tatacagatc cgttcaacca ggatagtgag ataaatttta 2341 acgaaagttt cccgcctgtt attaacaact acgacaacac tgaaatggtg gaggattttc 2401 ccataaatca aggctctaca ataccgccag gatcagtggc aaactcatcg acaggaccag 2461 ctaatggagc cagcagcaat tcgattccta taagttatcg cgctgacccg tcattactta 2521 cccacaccgg tttcaaccaa aaaagcttta ataatcgcat ggacgatgtg ccggagatcg 2581 aaatgctgtc agcaacacac gaacaagtgt atcaggagct aagtaatcgt aatgcaacat 2641 tacagattat acgcaattca acaagatctc atgacgtcct ttccgccctc cgccaagcca 2701 ttaaaatggg tcggactatt tttgtagatc tattaggggc tatattagaa aaaacatcat 2761 catggaattt agatttatgt attctactat taccggaaat atatgaactt cttcaaagtc 2821 aacataaatt tcattacacg agggcttgtg atacactacg tgttatactt tcaaacttct 2881 tgccaattat tcaggataac cttgatccat gggttaatgg tttgggtgtt gatgtcagtc 2941 gggaggaaag gcatcgtaaa tgtctagaat gccaacggtg gttgttgcag atacgtaact 3001 tgcccgagtc aaatcatttt ggcagtacac taacgcagct acagaatatg attgttaata 3061 tttaaccaca gcattaccgt cagaaataac gcaccaccca cgcaacacat ccctagtttg 3121 tatacttatt taactatata ttataatcta ttgtctttat tataatccat atacaactta 3181 catcaattcc ccacatttgg ctttaaaaaa atgtctgtgt ttatttcctg tttttttttt 3241 tcattaattt ttgttaattt attaatacaa ttgtcaaata gaagtaaaaa caaaaaatat 3301 atactcaagc agagaaaagt ttcaaatgtt ctcgacataa aataaatgga gaaaaaatgt 3361 catttcaatt tggcttaatc tcatccatgc tacttcttcc cagttatccc atttgtgatt 3421 tcttcaattg gttaataata gcagctgcag gcagcaaaat ttcagtcaaa ttaactgctc 3481 tgtccctgtt tggtttttgt ttgatagcag taagcaacaa ccacaaaact gatctgattt 3541 tataacacca aaactaattt tatgtagatg ttatagttta atttttttta aataaataaa 3601 ttgttgtttt agttattgca aattaacaca gtagtcccaa atgaaagcta gattttagct 3661 atcctaagtt ttgtttttta agttacgtat gtacctagct gtactgtatt ttgtaatatc 3721 attggttttg tgagcgtcgt ataatataaa gatttgtatg catgcatgtg tgatttta