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LOCUS XM_059366168 3531 bp mRNA linear INV 02-SEP-2023 (LOC106095997), transcript variant X2, mRNA. ACCESSION XM_059366168 VERSION XM_059366168.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3531 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3531 /gene="LOC106095997" /note="AP-1 complex subunit gamma-1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins" /db_xref="GeneID:106095997" CDS 347..3178 /gene="LOC106095997" /codon_start=1 /product="AP-1 complex subunit gamma-1 isoform X2" /protein_id="XP_059222151.1" /db_xref="GeneID:106095997" /translation="MYPYYEQDWSVLPPDNNRRFNPAFNMATIRQAFSEAVERVRMPT PTRLRDLIRQIRAARTAAEERAVVNKECAYIRTTFREEDPVWRCRNIAKLLYIHMLGY PAHFGQLECLKLTASTRFTDKRIGYLGAMLLLDERQDVHLLITNCLKNDLNSSTQFVV GLALCTLGAIASPEMARDLASEVERLMKSPNTYIRKKAILCAFRVIRRVPELMEIFLP ATRSLLSEKNHGILITGVTLITEMCENSADTLMHFKKIVPNLVRILKNLILGGYSPEH DVSGVSDPFLQVKILRLLRILGHNDTDASEAMNDILAQVATNTETSKNVGNTILYETV LSIMDIRSEGGLRVLAVNILGRFLLNSDKNIRYVALNTLLRTVHADTSAVQRHRTTIL ECLKDPDVSIRKRAMELSFALINGQNIRTMTKELLLFLEKADPEFKAQCSSGMILAAE RYSPNTRWHLDTQLSVLIAAGNYVRDDVVSSTIQLVSSSPAIEQTYITTRFWESLQVA NHCEDKQPLLQVAVWAIGEYGDMFMYSANDDDFERPSESELIAMYHKFLTSAQVSTTS KQYALVSLAKLSTRLQSCVEEIQALITSFGSHLNVDLQQRGVEFSQLFGSYKHLRPPL LEKMPAMQVSRMSSQNGESSGSYDDQSPDLIENGLGDDQIVTESNMNTMSDNTNILLD LLGGSDLTTPTQDLSVQKKNTLNANNDTTTTSNNQDFLDLLGLDMSSTQSSTAANVTS NVVSTANMNNVLMGSAGVGGGGGGGGGLLGDLGNIIPTTATAPTNGNDLSSIRAAASI NMPSLDLATANSLVNDPLANTAASNNVSVPQGPKLTALNKNGVLVQLVPVKMNDSMQI YMTTTNSSTTTLEQYLFQAAVPKSFTLQMLSPSGSVLAPGGVITQEMRVVSTSNATLR MRIRISYVADGVNVLEQTEVSGFPDTTPE" polyA_site 3531 /gene="LOC106095997" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctgttcaaaa gaaaacaaaa ccactgaaat gacgaggagt ttatagaaaa aaaagtaaga 61 taacataaaa acgcgtttgt tatcaaaaga aactctttgc agacctaaaa acgaaatgat 121 cgctgttggt gttggtaata atgatatggt gtaaataacc gtcatactcc ccgtagaaaa 181 ataacaatat attaatatta tgttaaataa aaaacgtgtc gtcattcatt cttaagcaac 241 aaaaaaatta tatcgatgaa aattgtgcct attgcagttg gaatttgcaa cgcatttttg 301 aattaaagtc tcagtgatct aattatatat cgacaataat ttaaaaatgt atccatacta 361 tgaacaggat tggagcgttt taccacctga taataataga agattcaatc cggcctttaa 421 tatggccaca atacggcaag ccttctctga ggctgtggaa agagtgagga tgccgacacc 481 tacacgttta agagatctca taagacagat acgtgcagct cgcacagctg cagaggaacg 541 tgctgttgtt aataaagaat gtgcctacat acgcaccact tttcgtgaag aggatccagt 601 atggaggtgt cgaaatattg ccaaattact gtacatacac atgctgggct acccggcgca 661 ttttggccaa ttggaatgtt tgaaacttac cgccagcaca cgttttaccg ataaacggat 721 tggttacctg ggagccatgc tattgttgga tgaacgtcaa gatgttcatt tgctcataac 781 aaattgctta aagaatgatt taaacagttc aacacaattt gttgtgggat tggctttatg 841 cacactgggt gctattgcct cacctgaaat ggcacgtgat ttggccagcg aggtggaacg 901 tctcatgaaa tcaccaaaca catacattcg caaaaaagca attctttgcg cctttcgtgt 961 tattcgacgt gtacccgaat taatggaaat tttcttaccg gccacacgct cgctgttgag 1021 tgaaaagaat catggtattt taattactgg cgtcacatta attacggaaa tgtgtgaaaa 1081 tagtgccgac acgttaatgc attttaaaaa gattgtgccg aatttagttc gcatcttgaa 1141 aaacctcata ttgggaggtt attcgcccga acatgatgta agcggcgtaa gcgatccatt 1201 tttacaagtg aaaattttac gtctgttacg catattgggt cacaatgaca cggatgcctc 1261 ggaggccatg aacgatatac tggcacaggt ggccacaaat acggagacga gtaaaaatgt 1321 cggcaatacc atattgtatg agactgtttt gtcaataatg gatatacgat cggaaggtgg 1381 cttacgtgtt ttggctgtaa atattttggg ccgattccta ttgaactcgg acaaaaatat 1441 acgttatgtg gctttgaata cacttttgcg tacagtacat gcagatacgt ccgctgtaca 1501 gcgacatcgt actacaattt tggagtgcct caaagatcct gatgtgtcga tacgaaaacg 1561 tgctatggaa ttgtcatttg ctttgataaa tggccaaaat atacgcacga tgacaaagga 1621 gcttttgtta ttcttggaaa aagctgatcc cgaattcaag gctcaatgta gttcgggtat 1681 gatattggcg gcggaacgtt attcgccaaa tacaagatgg catctggaca cacaattaag 1741 tgtcttaata gcggctggta attatgtacg tgatgatgtc gtttcgtcga caatacagct 1801 tgtctccagc agtccagcga ttgagcaaac ctatataacc acacgctttt gggaatcttt 1861 acaagtggcc aatcattgtg aagataaaca gccattatta caggtggccg tttgggccat 1921 tggtgaatat ggtgatatgt ttatgtatag cgcaaatgat gatgattttg aacgtccatc 1981 agaaagtgaa ttgattgcaa tgtatcataa atttttaaca tctgctcaag tttcaaccac 2041 cagtaagcaa tatgctttag tgtcattagc caagctaagc acccgactcc agagttgtgt 2101 agaagaaatt caagcattaa ttacctcatt tggcagccat ttaaatgtgg atttacagca 2161 aagaggtgta gagttctctc aactatttgg ctcatataaa catttgcgtc cacctctact 2221 ggagaaaatg ccagcaatgc aagttagtcg catgtcctca caaaacggcg agagcagcgg 2281 ttcatatgat gatcaaagtc ctgatctaat tgaaaatggt ttgggtgacg atcaaatcgt 2341 cactgaaagc aatatgaata ccatgagtga taacactaat atccttttag atctattggg 2401 tggatcagat ttaacaacac caacacaaga tttatctgta caaaagaaaa atacgctcaa 2461 cgccaacaat gataccacaa caacatcgaa taatcaagat ttccttgatt tactcggttt 2521 ggacatgtct tcgactcaat catccacagc agcgaatgtt acctccaatg ttgtcagcac 2581 tgccaacatg aacaatgtgc tgatgggcag tgcaggtgtt ggtggtggtg gtggtggtgg 2641 cggcggtctt ttgggtgatt tgggtaatat cattccaacg acagccaccg cgcctacaaa 2701 tggcaatgat ctgtcatcaa ttagggctgc cgctagtata aatatgcctt cgttggacct 2761 agccacagcg aattctctcg tcaatgatcc cctagctaat acagcagctt caaataatgt 2821 tagtgtgcct caaggtccga agttgacagc tctgaacaag aatggtgttt tggttcaatt 2881 agtcccagtt aagatgaatg atagtatgca aatatatatg accactacga atagttcaac 2941 aacaacgttg gaacaatatc tatttcaggc ggcagttcct aaaagtttta cattgcaaat 3001 gctatcgcct tccggctctg tactagcacc agggggtgtt ataacgcaag aaatgcgcgt 3061 tgtcagtaca tcaaatgcta ctctacgcat gcgcatacgc atatcatatg tcgccgatgg 3121 agtgaatgtt ttagagcaaa cagaagtaag tggttttccc gacacaaccc ccgaatagaa 3181 cttagtttag gatgagcaat tattttaata aatgcaagga agcaaaataa cataacgcta 3241 aatactaaaa cataaacaaa agataatgca gtataatatt aatataaaaa taatacttaa 3301 taattaaaca ttaccataca caataataat aataataaaa ataaaacaaa accaatagtg 3361 atgataacat gaaacgttaa cgtaaaaata atttagcaaa aaatcaaaca ctcacattaa 3421 gaacaggtaa agaaatttaa caagaagaaa aatcatccaa gaacaaggaa ataacgatcg 3481 tatatactga agaaaagaaa aactccctcc cttttgcgat acaaaaataa a