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LOCUS XM_044396301 5120 bp mRNA linear INV 09-DEC-2024 family B member 1 (LOC108064232), transcript variant X1, mRNA. ACCESSION XM_044396301 VERSION XM_044396301.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044396301.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5120 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5120 /gene="LOC108064232" /note="pleckstrin homology-like domain family B member 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108064232" CDS 480..4208 /gene="LOC108064232" /codon_start=1 /product="pleckstrin homology-like domain family B member 1 isoform X1" /protein_id="XP_044252236.1" /db_xref="GeneID:108064232" /translation="MSLTKKDPSLRVAASDPHLVSLGGGRLSTAVTIHYIHIGDTTIG SAASCSISLNGSGVRPLHCTIYRSDANEVTLVPEKDSRLLIDGSPILEETKLSQGAMI TIGNSNYLRFNNPDEAQMMRSAMGSNERISMPQIDFTQSARQAHELSQSLELESFYES IINPINHQTSSSAATTYELECPKVFTSDLVTVNMPAKDVLGQKYASFARNLAENHRNE KQLNNQFAKGVGGSHGGYWNVPSNAAIYKEQQQQQQDLLTKVNNDRYDRYPKAGGLQI YSMNGVNSDINNGGAELEDMLKICTEYADRNNSTIAPSSQHNTSSTSSITSSPIVQNR IKTNGSLPRDKNKSPFPQQAGGSGGSTANVSLLSSSSGYENVRLLGPNRVEINGQIHV PASAGGGGGSSGAPPTAAVRSSHENLNQNPNSATKYVPQSPRTKIRTNCMSPKKDVSF GNAFALAISPPPQASMAVVSASKPIAIPIPIPMVKPPLAPKPPAPNQQRDYDQLFKSF ERKQQQLDRMVPAKRSNKNINNLTLNLQSLESQTQSPKPSRKPAPAPRSIHLEQRQRR ELIQRRKQLKQELAELPPSAGIEGLELELGEQPLAASASPRLQLQALQNRVRRLEAQR NATRVMEENQQAKLKQSIEMKQDQLKKLRAMLKQKPNNACLKEELQLVCESLESDRKT FEDLEFQYFEEESEHHASHEEFKRQEQRLALEAELAALRIQIGPDEEEEPPGSQPSSP GSTGSNLVNGVMSQSLFGSAELLCPKRRNQEDLMSKSINENMFYHHKIEANTSTPKRL PLQLFEDLGGGSCEQISFNLSLQGDRFEVNPLERRVPSQDDIDRSCKVANDAPISTSQ GASTKIFDSIKEIERNRKLLLAQQGHQVIEHERQKMYDLKKKSHDEARTQYLLSTQQS MEQQQQQLESDANGGKDAKLFERTEMQKLNQKPGDTVDEQVQKNGGDKENNVQNRKST GSSPTTTATTTTGTTPQQQRHSQPELEHHAIALGIGGGAGGGGGVGGGNQMVVRSPRP LSEANNCDAAIEAPKFGNGMDSSSSPAVDNKRASSNSQDTASAGSGSGNSGSGGSTAS ERKRILPKHQRPLTRYLPIFSPDLNLRHHIETAGHQIDLCPHVFVDAHSCRGYLHKLG ATFHAWSRRWFVLDRQRSALIYYSDKSERKPRGGAYFATIDEVYLDHLNASKSGRPHC TFIVKTKKRSYNLQAASDSAARIWIDAIITGAQGNLDY" misc_feature 480..845 /gene="LOC108064232" /note="forkhead associated (FHA) domain superfamily; Region: FHA; cl00062" /db_xref="CDD:469597" misc_feature order(609..614,654..659,663..665,717..719,723..725) /gene="LOC108064232" /note="phosphopeptide binding site [polypeptide binding]; other site" /db_xref="CDD:438765" misc_feature 1971..>2534 /gene="LOC108064232" /note="Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; Region: YhaN; COG4717" /db_xref="CDD:443752" misc_feature 3888..4190 /gene="LOC108064232" /note="Pleckstrin homology-like domain; Region: PH-like; cl17171" /db_xref="CDD:473070" polyA_site 5120 /gene="LOC108064232" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttgtgtttgt tgctttgctg aattcggttg aggaaaacgc ttgtaaagtt caattatcgt 61 cggcgtattt atttaccttt ttgcgcccaa ctcaccgcgt tctgttttga ttcctttttt 121 ttgccaatcg agtgcctgtt gccttcctac actgagagaa atctgaatat acacgataat 181 gcgggcgaag cggtggaatt taattgcaaa tcgcatttta tccttggctg attgcggttt 241 ccttttcgcc gttgttgttt ttgttgttgt gtgcagcaaa taaaactcgt ttcacgcgcc 301 agtgtgtatg tgtgtgtgag cgcggagtgt gcgtgtgttg gtgtgttgtt tgtttgtttg 361 cgcggctttt tttttgtgat tactgttttt gttattattg gatgcaaatt tgacaaaaac 421 agtgacaatt tcgaggaatt caacaagaaa cagcaacagt tgacgccgga gaacgtaaga 481 tgtccttgac gaaaaaggat ccgtcgctga gagtcgccgc ctcggatccg catctcgttt 541 ctctgggcgg cggacggctg agcaccgccg tcaccatcca ctacatacac ataggtgata 601 cgacgattgg atcggcagcc agttgcagca tctcgttgaa tggaagtggc gttcgtccgc 661 tgcactgcac catctacagg agcgacgcca acgaagtgac cctggtgccg gagaaggatt 721 cccgcctgct gatcgacggg tctccgattc tggaggagac gaagctcagc cagggggcga 781 tgatcacgat cggcaactcc aactacctga ggttcaacaa tccggacgag gcgcagatga 841 tgcgctcggc gatgggctcc aacgagcgga tctcgatgcc ccagatcgat ttcacgcaat 901 cggcgcggca ggcgcacgag ctgagtcaat cgctggagct ggaatccttc tacgagagca 961 tcataaatcc aatcaaccat cagacatcct cctccgccgc caccacctac gaactggagt 1021 gccccaaggt cttcacctcc gacctggtca ccgtcaacat gccggccaag gatgtgctgg 1081 gccagaaata cgccagcttt gcccgcaatc tcgccgagaa tcatcgcaac gagaagcagc 1141 tgaacaacca gttcgccaag ggagtgggtg gcagtcacgg tggctactgg aatgtgccca 1201 gcaatgcggc gatctacaag gagcagcagc agcagcaaca ggatctcctc acgaaggtga 1261 acaacgatcg ctacgatcgt tatcccaagg cgggtggcct gcagatctac tcgatgaacg 1321 gcgtgaatag cgatatcaac aatggaggag ccgaactgga ggatatgctc aagatctgca 1381 cggaatatgc cgatcggaat aatagcacca tagcacccag cagccaacac aatacttcga 1441 gtacatccag cattacgtcg tcaccgattg tccagaatcg cattaaaacc aacggttcgt 1501 tgccgcgcga caagaacaag tcaccgtttc cacagcaggc aggaggatca ggaggcagca 1561 cggcgaatgt ttctctgttg agcagctcgt cgggctacga gaatgtccgg ctgttgggac 1621 cgaatcgtgt ggagatcaat gggcaaatcc atgtgccagc ctcagcaggc ggagggggcg 1681 gatccagtgg agcgcctccc acggcggccg taaggtccag tcatgagaat cttaaccaga 1741 acccgaactc ggccacaaag tatgtgcccc agagtccgag gaccaagatc cgcaccaact 1801 gcatgtcgcc caagaaggat gtgtccttcg gcaacgcctt cgccctggcc atcagtccac 1861 cgcctcaggc ttccatggca gtggtctccg cctccaaacc catagccata cccattccca 1921 ttcccatggt gaagccaccg ctggcaccca agccaccggc tcccaatcag cagcgcgact 1981 acgatcagct cttcaagtcc ttcgagcgca agcagcagca actggatcga atggtgcccg 2041 ccaagcggag caacaagaac atcaacaatc tcaccctgaa tctccagtcc ctggagtccc 2101 agacgcagtc gcccaagccg agcaggaagc cagcgccggc accgcgcagc attcacctgg 2161 agcaacgcca gcggcgggag ctcatccagc ggcgcaagca gctcaagcag gagctggccg 2221 aactgccgcc ctcggcggga atcgagggac tcgagttgga actgggtgag cagcccctgg 2281 ccgccagtgc ctcgccgcga ctgcaactgc aggccctgca gaatcgcgta cgccgcctgg 2341 aggcccaaag gaacgccact cgcgtcatgg aggagaatca gcaggccaag ttgaagcagt 2401 ccatcgaaat gaagcaggat cagttgaaga aactgcgagc catgttgaag cagaaaccga 2461 acaacgcctg cctgaaggag gagctgcagc tggtgtgcga gtccctggag agcgatagaa 2521 agacttttga ggacctggag tttcagtatt tcgaggagga gtccgagcac catgccagcc 2581 acgaggagtt caagcgacag gagcagcgtc tggccctgga agccgaactg gccgctctgc 2641 gcattcaaat cggaccggat gaggaggagg agccgcccgg ctcgcagccc agctcgccag 2701 gatccaccgg cagcaatctg gtcaacggcg tgatgtcgca gtccctgttc ggctccgctg 2761 aactgctctg cccgaagcga cggaaccaag aggatctgat gtcgaagagc atcaacgaga 2821 atatgttcta ccatcacaag atcgaggcca acaccagcac gcccaagcgt ctgccgctcc 2881 agctgttcga ggatttgggc ggcggcagct gcgagcagat cagcttcaat ctctcgctgc 2941 agggcgatcg cttcgaggtg aatcctttgg agcgacgcgt gccctcgcag gacgacatcg 3001 atcgcagctg caaggtggcc aacgatgcgc ccatctccac cagtcagggg gcgagcacca 3061 agatcttcga cagcatcaag gagatcgaaa ggaatcgcaa gcttctgctg gcccagcagg 3121 gtcatcaggt aatcgagcac gagcggcaga agatgtacga tctgaagaag aagagccacg 3181 acgaggcccg cacccagtat ctactctcca cccagcaatc gatggagcag caacagcagc 3241 aactggaatc ggatgccaac ggcggcaaag atgcgaaatt attcgagagg accgagatgc 3301 aaaagctcaa tcagaaacca ggtgacacag tggatgagca ggtgcaaaag aacggtggcg 3361 ataaggagaa taatgtgcag aacagaaaat caaccggcag cagtcccaca acaacagcaa 3421 caacaacaac tggaacgaca cctcaacagc aacgccattc gcagccggaa ttggagcacc 3481 atgccattgc cctgggaata ggaggaggtg ccggaggagg aggaggagtc ggcggtggca 3541 accaaatggt ggtccgcagt ccacgcccgc tgtccgaggc caacaactgc gatgcggcca 3601 tcgaggcgcc caagttcggc aacggaatgg actcctcctc gtcgccggca gtggacaaca 3661 agcgggcgag cagcaattca caggataccg catcggcggg cagcggaagc gggaacagcg 3721 gcagtggcgg cagcacggcc agcgaacgga agcgcatcct gccgaagcac cagcgcccgc 3781 tcacccgcta cctgcccatc ttctcgccgg atctgaatct gcggcaccac atcgagaccg 3841 ccggccacca gatcgatctg tgtccgcatg tctttgtgga cgcccacagt tgtcgcggtt 3901 acctccacaa gctgggtgcc acgtttcacg cctggtcgcg gcgctggttt gtcctggatc 3961 gccagaggag cgccctaatc tactactccg ataagtcgga gaggaagccg aggggcgggg 4021 cttactttgc aaccatcgac gaggtctatc tggatcattt gaacgcctcg aagagcggac 4081 gaccgcattg cacgttcatt gtgaagacga agaagcgaag ctacaacctg caggccgcct 4141 ccgattcggc ggcccgtatt tggatcgatg ccatcatcac cggagcccag ggtaatctgg 4201 actactagag gattacggat tctcttctgc ccagtgcaca gtctcagcat tagatgggaa 4261 agattttttt aatttataag ctcaaataac tataacaaag aaacaaaagt agccatgtaa 4321 gaccaaaaaa caattgctca acacagcgag cgaagggcaa aaggaacccg taactttctc 4381 ttctttttgg cgaactaacg aaatccgaga tttcagtact ggaccaaagt caagaacgta 4441 ttttttatag acctatacct agattatgta atgtacattt tactttgtca tattgtggtt 4501 aagaactatt tttctatcgg taggtttaga tttagaaatg aatgtaaatc aaggacagcc 4561 ccatgctact aacaccgcca tttaaaaacc taatcatatg gataccctta tagtgctttg 4621 accaatggtg gcagtgcccc gatattactg aagttttaac ctctatggtt ttcatttttt 4681 ttcggcgaac tgatattatt ggtcaaacat ctatataatc gcataaatat cataaaccct 4741 agactaaact ttatacatat acgaattgta taacgattta aatgtaacaa ccaaaatgac 4801 tcttgaacac ttgaagtttc atcgtgaatt tacctattaa ctttataata ttgtatgcct 4861 atgaattata ttttgtaaaa aatataccat atattttgat aaatgtataa ttgaaggaat 4921 aagatcgaga gaaatgggga caaactattt gcccatcact acgcctaaga ctaaaactga 4981 actttgaacg atttgctcag gcagctggaa aggataatca aaagcaaaac agaaactgag 5041 aagcatgaaa ctaattctaa agaataacta taaatctgta taacaataca agctagttaa 5101 taaaaataat tgtttttttt