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LOCUS XM_044396258 6829 bp mRNA linear INV 09-DEC-2024 (LOC108067704), transcript variant X1, mRNA. ACCESSION XM_044396258 VERSION XM_044396258.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044396258.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6829 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6829 /gene="LOC108067704" /note="uncharacterized LOC108067704; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108067704" CDS 1167..4712 /gene="LOC108067704" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_044252193.1" /db_xref="GeneID:108067704" /translation="MESDEQQQEVVGGSAPLCRICITTHHQQPNNNTNNTTASPANLP MIPIFGEDALWQKITTLANVKISKNDTLPQQVCVACAKSAISACVFKKKCEEADHFYR QQLRLQKIEGADPLETSASAGDQAKSSGCSSGSGSSSASGSGSGSSSSSSSSSDDEDE DNDQDQEQDQEQELDEVEAGEAGHKRLQNGYSPVINGHRGDGVQEEELMDDHHHAAGH EEEEQDEQDHHRNGLELAEVNPEDEDDDDVEEVNPMNHHHHHHDNNDDDGEITGHAGH PKEPFDFNSIRLMQEYMQHQMNKFPNGSAAGGHPDMELDLDQQQHHHHHHDDDDEDMS LPLIPEIELITPGDEAPADASNHNDLDLVNGVGVGVGVVQGMRGPGFQCPHCYQIFEM KQILKAHMQSVHGAPGPVYECSNCRKTYFYKRFLEKHIRRGRCVKKRRNQTRPMQCSD CHVLFPTGHHLGWHKRTGCPSKAAKMPLQQLFKQNIVQFNNFPKRIAAGGGGGGGGGA ARKPTAPELHINNRKLGLANKRKGRTRIKLDAKKIALAKQLILREATTTVIANELNIS RTFAWRLRKSLVNGVSLHERVVDPSQEEQHLQQLQQQQHHHHQQLQLQQQEEQQQQQR EREQHHLSSLPYSHLGLGLIKEERQDSEDEEQQQQQRQHHHHSLGLVDECGADEIGAE ETAGYMGDEDAVSGLLHNGGYDPDPDSDPIEHDPFEGTENHEHPANGSVSPAAKLVPP SGVPVPVPVQVHAAAAAAAAARSDVEVYKRLLAESQHFPHIVNAQQLQMQQQHRERER EQRDRERAREREREREQLQQQQKVHNGGMPMLTRYPPAVMHALPVNLSLRSMPPHMNS NESNGSSSSNTAAPVPVPVAGSSAATSTGATPTGKKPRKPNVFIDDEKYAMAKLLVAQ NSSTMEIARALNVSQMTAWKVRDAILKGVPLSYRNKRSDGRHSEEFSVKEQQQQQQQQ QEQQQRQQEMQRQQQQQMEQMELIKQQRQQQELLLQQQQQQQQQQQQQQQQQQQQLRH HSTPADTSHYQQQAAPKMLHPRRRLKAAERELRDKEITREILELIKEDSNIQYWKVSA RLAEKGINISPSSVCQKLKSMGIHRRWKPGDKPPMLAISQLKAATVAAAAAAAGLAGV GGSAGLAGNSFGLADDGYEQQQFDMGGHFLSAFTR" misc_feature 1215..1475 /gene="LOC108067704" /note="Zinc-finger associated domain (zf-AD); Region: zf-AD; smart00868" /db_xref="CDD:214871" misc_feature 2313..2378 /gene="LOC108067704" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(2328..2330,2334..2336,2340..2342,2346..2351, 2358..2363,2370..2372,2418..2420,2424..2426,2436..2441, 2448..2453,2523..2525,2529..2531,2535..2537,2541..2546, 2553..2558,2565..2567) /gene="LOC108067704" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 2403..2459 /gene="LOC108067704" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 2508..2567 /gene="LOC108067704" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" polyA_site 6829 /gene="LOC108067704" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgcatttttg ttttggttct cgacgtgaac ggacgtgtgt gctcgtgtga tgcggcgcca 61 gttggcaggt acggtacagg tagcgtagtt tacctttgcc gctctacaaa agtcaaataa 121 caataacaac aacaacaaca acgacggcga taatcgcagc aacaacaacg acaattgcaa 181 caataggcgc attcttaatt gtgtttacct ttgattgtca ttcgccagcg ttacatacac 241 agactcacag agataaacat acattttata actgcgattt gactgcgtgc gtgtgtcgtc 301 gcgtctcctc tcgccccccg cccgtcgccc ctctattttg tttgtttgtt tttggttctt 361 gttctctcgg gttttccttc aattggaatg tgcagcgaaa agaacgacgg caagaagaaa 421 agccaggcgc aaagaacaaa tcaaatcaga gcaacggttt taaaatttat ataagcacta 481 acataattta ctattctcgc aaacacacac acacacatcg acgaccacag acattcaagg 541 caactacttt aaaaaaagca gtaataaata caattttaca cattcacatt ccattttgat 601 tctgttgtgt gtgaaaaact tataagagaa aaacaacaaa aacaacgaaa accaacggca 661 aataacaaaa agtatcaacg gcaacaataa caacaacaac aacagtgagc agcatagcaa 721 agcagcgaag tcaacgtcaa aaccgaagaa gaagaagcaa gataaataca tagcaatttc 781 gactaaataa agtttaccaa acgtcgtcgg tacaatcgga acgttccgtt cctgcgtttc 841 agttcttcct ttccgttcgt tccgcgcgct cctctctcgc gtgagagaga gtgctgccac 901 ttgttgccgg ctcggcttgg ggacactctc tcttcccatt ccatcattcc atcgaagcac 961 ggatacgata acgctaccga ttgatccaat ccgatcggat ccgatctgtt cgatccacat 1021 ccacccacta ccggcggaga tttggaagca gtagacgcct gaaccattgg aagaggcatg 1081 cagttgatgg ccagcggtta ctcctgcagc agctccatct ccttcagatc cttcagttcc 1141 agttccctcc ggtccaaact ctcgcgatgg agagcgatga acagcagcag gaggttgtgg 1201 gcggaagtgc accgttatgt cgcatctgca tcaccaccca ccatcagcag ccgaacaaca 1261 acaccaacaa cacgacagca tccccagcca acctgccaat gatacccatc ttcggggagg 1321 atgcgctctg gcagaagatt accacgctgg ccaacgtcaa gatcagcaag aacgacactc 1381 taccgcaaca ggtgtgcgtc gcctgtgcca agtcggctat ttcggcctgc gtgttcaaga 1441 agaagtgcga ggaggcggac catttttacc gccagcaact gaggctccag aagatcgagg 1501 gcgcggatcc gctggagacg agcgcctccg ccggcgacca ggccaaaagc agcggctgca 1561 gcagcggcag cgggagcagc agcgccagcg gcagtggcag cggcagttcc tccagcagca 1621 gttcctcctc cgacgacgag gacgaggaca atgatcagga tcaagagcag gatcaggaac 1681 aggaactgga tgaagtggag gccggggagg ctggccacaa gcggctgcag aatggctaca 1741 gcccggttat caatggccat cgaggtgatg gcgttcagga ggaggagctg atggatgacc 1801 atcatcacgc agctggccac gaagaggagg aacaggatga gcaggatcac catcgcaatg 1861 ggctggagtt ggcggaggta aatcccgagg atgaggacga tgacgacgtg gaggaggtaa 1921 atccaatgaa ccaccaccat caccaccacg ataataacga cgacgatggc gaaataaccg 1981 gccatgccgg gcatcccaag gaaccgttcg acttcaactc gattcgcctg atgcaggagt 2041 acatgcagca tcagatgaac aagttcccca atggctccgc cgccggtggt cacccggata 2101 tggagctcga tctcgaccag cagcagcatc atcatcatca tcatgatgac gatgacgagg 2161 acatgtcgct gccgctgata cccgagatcg agttgatcac accgggcgat gaggcgccag 2221 cggatgcctc gaatcacaat gacttggact tggtcaatgg cgtgggcgtg ggtgtgggcg 2281 tggtccaggg gatgcgggga ccgggcttcc agtgccccca ctgctatcag atcttcgaga 2341 tgaagcagat cctcaaggcg cacatgcaga gtgtccatgg agcaccggga ccggtgtacg 2401 agtgcagcaa ctgccgcaag acctatttct acaagcgttt cctcgagaag cacatacgac 2461 gtggtcgctg tgtgaagaag cgtcgcaatc aaactcggcc catgcagtgc tccgattgtc 2521 atgtcctctt ccccacgggc caccatttgg gctggcataa gcgcaccggc tgcccctcga 2581 aggcggccaa aatgcccctg cagcagcttt tcaagcagaa cattgtgcag ttcaacaatt 2641 tccccaagcg gattgccgcc ggcggaggag gaggaggagg agggggagcg gcacgcaaac 2701 caacggctcc cgagctgcac atcaacaatc gcaaactggg cttggccaac aagcgaaagg 2761 gacgcactcg catcaagctg gacgccaaga agattgccct ggccaagcag ttgatactgc 2821 gcgaggccac caccacggtg attgccaacg agctgaacat ctcgcgcacc ttcgcctggc 2881 gcctgcgcaa aagcctggtc aacggtgtca gtctgcatga gcgcgtcgtg gatccctcgc 2941 aggaggagca gcacctgcaa cagctgcagc agcagcagca tcatcaccat cagcagttgc 3001 aattgcagca gcaggaggaa cagcaacagc agcaacgcga acgggaacaa catcacttga 3061 gcagccttcc ctacagccac cttggcctgg gtctcatcaa agaggagcgg caggacagcg 3121 aggatgagga gcagcagcag cagcagcggc agcatcacca tcactcgctc ggtctggtgg 3181 acgagtgcgg agcggatgag attggggccg aggaaacggc tggctatatg ggcgatgagg 3241 atgccgtgag cggcctgctc cacaatggag gctacgaccc ggatcccgat tccgatccca 3301 tcgagcacga tcccttcgag ggcaccgaga accatgagca tcctgcgaac ggttcggttt 3361 cgcccgcagc gaaacttgtg ccgccatcgg gggttccggt accggtgcct gttcaggtcc 3421 atgctgctgc cgccgccgcc gccgccgctc ggagcgatgt ggaggtctac aagcggctgc 3481 tggccgagtc gcagcacttt ccccacatcg tcaacgccca gcagttgcag atgcagcagc 3541 agcaccgcga gcgggagagg gagcagcggg atcgcgagcg ggcaagggaa agggagaggg 3601 aaagggagca actgcagcag cagcagaagg tccacaacgg tggaatgccg atgctcactc 3661 gttatccgcc cgccgtcatg cacgccctgc ccgtcaacct gtccctgcgc tccatgcccc 3721 cccacatgaa tagcaacgag agcaacggca gctccagcag caacacggcg gccccagttc 3781 ccgttcctgt tgccggctca tcggcagcca cctcgactgg cgccacgccg actggcaaga 3841 agccccgcaa gccgaacgtt ttcatcgacg acgagaagta cgccatggcc aagttgttgg 3901 tggcccagaa ctcctccacc atggagatag ccagggccct caatgtatcc caaatgacgg 3961 cctggaaggt gcgcgatgcc attctcaagg gagtgccgct ctcctatcgc aacaagcgat 4021 ccgatggcag gcattcggag gagtttagcg tcaaggagca gcagcagcaa cagcagcaac 4081 aacaggagca acagcaacgc caacaggaga tgcagcgaca gcagcaacag caaatggaac 4141 aaatggagct aatcaaacag cagcgtcagc aacaggagtt gctactccag cagcagcagc 4201 aacagcaaca gcagcagcaa caacagcagc agcagcagca acaacaactg cgtcatcaca 4261 gcacaccggc ggacacatca cactatcagc aacaggcggc gccaaagatg ctgcatcctc 4321 gccgccgcct aaaagcagcg gaacgcgagc tgcgcgacaa ggagatcaca cgcgaaatac 4381 tcgagctgat caaggaggac agcaatatac agtactggaa ggtgtcggct cgcctggccg 4441 agaagggcat caatatatcg ccctcgtccg tctgccagaa gctcaagtcg atgggcatcc 4501 accggcgctg gaagccgggc gacaagccac ccatgctggc gataagtcag ctcaaagcgg 4561 ccactgtggc ggccgcagcg gcggcagctg gcctggccgg cgtcggcgga agcgccggat 4621 tggccggcaa cagctttggc ctggcagacg acggctacga gcagcagcag ttcgacatgg 4681 gcgggcactt tctcagtgcc tttacgcgct agaccagaag tcctgcccat ctgggcctac 4741 atttaaatac tacagtggat tgtaggcatc gtaggcatca tttgactggg aaattgtagg 4801 tctaaagagc tgagttttaa gttattgaag cctttgaggg ttgattttgg tttaagatac 4861 atttctttta tgaacaaaat tataagtagc caatataaaa ataattctac tcggcagctg 4921 tttagtttta tgttgaatgt cattgagaaa ttcattgcag atctaccatt tcccaggcga 4981 aatgcctaga aatttgccca caattaccac tgtgagttta acatatatac atttttgttt 5041 ttcgagccac cctaatccat atgcatagac cagcacagca acaacaaggt gtatttttta 5101 tatagtattt gaaagagaga gagcgcgctt gaaatgtatt tgtatttgta atcgttatga 5161 gatagcatat attgtatgat tctgtattag atttatatat ccaatatata tgctaagcat 5221 tcctagaatg tcacacacac acacacaaag aaaatgaaaa agaaaaacgc ccattccaag 5281 cgaggaaatg atttcctttc tttaagttca gtagcttcct tttcctcttc ctccatccac 5341 acacacacac acaaacacac ttagctgata atgtaataat ttaattaaca tatttattga 5401 tcgtatgtcc ttgtgagtgt gtgtgtgtgc gctttaactg agaaatgtat ttaaagattt 5461 tcaccatttt taatttattt attttactca cgcatacaca cacacacaca tataagcaat 5521 tattcagtac tgaactttaa tttagttaaa ttaatgcatc aaacgaagaa ataacaatca 5581 gaacaaagca aacggaagca gaacaaacag cagctagaga gaaagttaag aaagctagca 5641 acataagtgc aattataaac tacatgtgta aacctaaaga accagaagaa tgtaaaatgt 5701 tttacgtgtg accgaaatag aagataggag agcgagagaa ggggagaaag agagggaaaa 5761 ttgtctatcc aatttaagac cttagcacca ctgaacattt tagaaccaac tttcatatct 5821 tcagatatcc taaactaaaa gatatcttca ttttaaaacg ctaactgatg aaaaacttgt 5881 gttttttggt taaaagtgta gaaagaaatg ttcaaattta aaataagttt aggtcaatta 5941 aaacaacatt tagtttttac tttagaacga cttttataca ttcccaaaga cataccaaaa 6001 ttttgtttag cactataaac aggctgaaaa tcgaaacatc acccacaaaa agtttgtttt 6061 ttgtgtgtgt ttacagtggt gttgagccat tagttaataa ctttgattgg gagaaccaat 6121 ttaaggttta cacttcactc cccaactttc ctcctcttct ttctcctggt cgttttccat 6181 atagacagct actccgaatc catcctccca accaagcccc aatttatgta agaaagctat 6241 ggaaacaagg caaacgatca atttttgaaa acgtcgtagc aaattgttag ttaaaaatga 6301 gaagaaaact aaataacaca aaagatcaaa agaaaaaaga tggaaaaata tgaagacaag 6361 ctgaggactc agaactgtat ttatttacag tcaattttag gaacatttat tttattatta 6421 ttattttttt gttgttgtgg atgaaattct attcgtctgc gatttatttt tgtatagctt 6481 ttaaggtccg aagttagagc aaaagagata gcaagagaga gcgagtgaag gttgatatag 6541 tatttttttt atatttttgt acaatttgaa attgtaactg ctttttatca atcaatcaat 6601 gaatgattcc ctccctccac caacccacac acacacacat acacacgcat actgtgcaaa 6661 gtattttcta tattcattac atataaatat atccatatat aactaaacta aatttataaa 6721 atagtttttt tttgtttttt ttttttacat catatatata tttagccgca gcttataaaa 6781 tagatttaaa aataaaaaat gattacaatt tttttgtatg aaatgcaaa