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LOCUS XM_044396251 6663 bp mRNA linear INV 09-DEC-2024 transcript variant X12, mRNA. ACCESSION XM_044396251 VERSION XM_044396251.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044396251.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6663 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6663 /gene="OtopLa" /note="Otopetrin-like a; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108058416" CDS 812..3610 /gene="OtopLa" /codon_start=1 /product="proton channel OtopLc isoform X9" /protein_id="XP_044252186.1" /db_xref="GeneID:108058416" /translation="MQRCPYIHEMRERLLDQPRETLQLENMERANLLDNRQSASESNQ LQGDGYHTSPAHQRTPLVPHDLGEDFNLDFDDDFPIDARRPKNAKTSLFIVTSLVYAI LLIVVCIAYVISDVTTHRLPVLYYETFFTYLYGVSILFLLYVFCFLLQESSCCNGGNG GSKPKPQPKEKKSKKAKNADPADSKDAKGSKDSGKAAKGAAYQEAPVDAEVAVTPKNV RKRKTTHSDLTHGSFFLRVGAIAFGLGAMIYIGLEFGSFFEIPFDSPCHHILIGVNPL LQMIFTFMQMYFIFMNARLNIHRFKVIARFGLMHVVATNICVWIRTLVKESLLEITIY HQKNEPEAGASSIAHSIRQHALRHAGTVLRTHAGPNSEFEVLDGEDILPKDVYKSDNV LSKLVRNTVDGISKSLGMGGDLTSTSSTTSTTTRAPFTTPNYQWHSTTMARKLKKFIT SATTAATTAAGGSGTTTTSSTTISPSTTTSTIDPSSSTTTTTTTFSPFSTTTATNNNL ETSSGLQRLLSSSANPPSLAPVDGFGSAVTPTSVSGSGSFMDSFLSSTLSPASSTEGS ASIMNNLFGQQGPMENSFQTYSDLGHEEVTGLVSFENLESLDNIYPAALSSNIGTLNS TACGRIDIMGTIVYDSAPYLYPFIIEYSLIGAVVLYVMWKHIGRYPGRMNDEDLEHRL EVMLSRRAVAMAQQQRSGRVDCVGSSKGLFFGLLLLVGALICLILFFVLVRHQQFSLL AIYLADASHCILMAFAILAIIVGFIRVKNLKFRCEEQSNLNDILLRISAFGLFTYSVF SIIAGSLKVLESEPSLLVTTTGGVAVFQVILQLLFIADVSRRRVHLPEHDRSKPGRQI VTFLLICNVAMFAIYTFEAQKVFANPVSRYVQLEFYGFVPWSIIQRITLPLCIFHRFH SAVTLAEIWKTTYKARLE" misc_feature 1511..>1954 /gene="OtopLa" /note="Region: Otopetrin; pfam03189" /db_xref="CDD:460840" misc_feature <2639..3550 /gene="OtopLa" /note="Region: Otopetrin; pfam03189" /db_xref="CDD:460840" polyA_site 6663 /gene="OtopLa" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgaacttttg cgagtgatgg aagacaagtt gtctcttctc agaccgtgag agacaaaagt 61 gctgggaaat aactaaaaat taaatcagca aaactaccga ataacgaata aaaacagaaa 121 gtgcgtcgtc gtccattttg tgtgtgttgt gcgtgtgtgc gtgtgtccat gtccttttgt 181 atttcgtatt ttggcccaca acgcaggaca ataatagcct aaatcaaccc gaaacaaaac 241 cgaaataata aaacaaaaac gcgcgcaaaa ccacgacccc ctctccacgc caaaacatct 301 tgttcttctt ctcgagcgga agcaaaacaa aaacaacagg acaacgccaa aagaaagtag 361 aaaagagaag cgaaatagaa agaagcaaga ggaagcgacc ccaaaagcac acacatatga 421 tctgaacggc aggatataac cccaaaaaaa acgaccaatc tgcgcaacca aaagtcttaa 481 accttcaact gctgctgcaa accgtatgac tgatttatca agttgagcaa accgtagcga 541 ttacctccct aagtacttta tactagctta caagcataaa catagtatat aaacccgcat 601 ttacggccgg atatatatta cgaatggcaa ggcaatagat ccaaatatat gtattggatt 661 gattatatcg taaaaagcta gaactgctgc attttgaaac tcccgtagat agtgtctaca 721 ctttagcata tatacatata tatttatctg atagataggg aagagcagag gagcagagaa 781 gggtcggaag agagagagag aggagcaagg aatgcagcgg tgtccctaca ttcatgagat 841 gcgcgaaaga ttactggacc agccacggga gacacttcaa ctggagaaca tggagcgggc 901 caatctgctc gacaaccgcc aatcggcatc cgaatccaac cagctgcagg gcgatggcta 961 tcacacgagt cctgcacacc agcgcactcc actagtgcct cacgatctcg gcgaggactt 1021 caatttggat ttcgacgatg actttccgat cgacgcccga cgaccgaaaa atgccaagac 1081 atcgctgttc atcgtgacca gtctggtgta cgcgatccta ctgatcgtcg tctgcattgc 1141 atacgtaatc agcgatgtaa ccacccaccg actgccggtt ctctactacg agacattctt 1201 cacatatctc tacggcgtca gcatactctt cctcctttac gtcttctgtt tcctgctgca 1261 ggagagctct tgctgcaatg gcggcaatgg tggcagcaaa ccgaaacccc aacccaagga 1321 gaagaagtcg aagaaagcca aaaatgccga tccggccgat tcgaaggatg cgaagggctc 1381 taaggactcg ggcaaggcag ccaagggcgc cgcatatcag gaagcacccg tggatgccga 1441 ggtggccgtc accccaaaga atgtgcgcaa gcgcaagaca acccatagtg acctgacgca 1501 cggtagcttt tttctgcgcg taggagccat tgctttcgga ttgggcgcca tgatttatat 1561 tggcctggag tttggatcgt tcttcgaaat acccttcgat tcgccatgcc atcacattct 1621 gatcggcgta aacccactgc tccaaatgat attcaccttc atgcagatgt atttcatatt 1681 catgaatgcc cggctgaaca tccaccgctt caaggtgatc gcccgctttg gcctgatgca 1741 cgtggtggcc accaacatat gcgtgtggat tcgcacgctg gtcaaggaat cgctgctcga 1801 gattacgatc tatcaccaga agaacgaacc ggaggcggga gcctcctcca ttgcccattc 1861 gatacggcag catgccctgc gtcatgctgg cactgtgctg agaactcatg cgggacccaa 1921 tagcgagttc gaggttctcg acggcgagga cattctgccc aaggatgtgt acaaaagcga 1981 caatgtgctg tcgaagctgg ttcgcaatac agtggatggt atttccaaga gtctgggaat 2041 gggtggtgat ctaaccagca ctagtagcac cacctcgacg acgacgaggg ctccgtttac 2101 cactccgaac taccaatggc acagcactac tatggcccgc aagttgaaga agtttatcac 2161 cagcgccacc acagcggcga ccacggcggc gggcggcagt ggcaccacca ccaccagtag 2221 caccaccatc tcaccttcga ccaccaccag taccattgac ccatcatcga gcaccaccac 2281 caccaccacc accttcagtc catttagcac caccactgcc acgaataata atctcgagac 2341 cagcagcggc ctgcagcgcc ttctatcatc cagcgctaat ccgccgagcc tggcgccagt 2401 cgatgggttc ggttccgctg ttacgcctac ttccgtttcc ggttcgggat cctttatgga 2461 ttccttcctg tccagcacct tgagcccggc aagcagcacc gaaggctcgg ccagcataat 2521 gaacaacctg ttcggccagc agggacccat ggagaatagc ttccaaacgt attcggatct 2581 gggccacgaa gaggtcaccg ggctggttag cttcgagaat ttggagagcc tggacaatat 2641 ctacccggcg gccctgtcct ccaatatcgg cacactcaac tccaccgcct gcggaaggat 2701 cgatataatg ggcaccattg tctacgattc ggcgccgtat ctgtatccat ttattatcga 2761 atactcgctg atcggggcgg tggttttgta tgtcatgtgg aagcatatcg gtcgctatcc 2821 cggcaggatg aacgatgagg acttggagca ccggctggag gtgatgctat cgcgcagggc 2881 ggtggccatg gcgcagcagc agcgatccgg acgcgttgac tgcgtcggct cgtcgaaggg 2941 cctgttcttt gggctcctgc tgctggtcgg agcgctcatc tgcctgatac tcttcttcgt 3001 cttggtgcgc catcagcagt tctcgctgtt ggccatttac ctcgccgacg ccagccactg 3061 cattctgatg gcctttgcca tactggccat tatagttgga tttatcaggg tcaagaacct 3121 gaagttccgc tgcgaggagc agtcgaacct gaacgacata ttgctgcgca tatcggcctt 3181 tggcctgttc acctactcgg tgttcagcat catcgccggc agcctgaagg tcctggagag 3241 cgagccgagc ctgctggtga cgaccaccgg gggcgtggcc gtcttccagg tgatcctgca 3301 gctgctcttc atcgccgatg tgtcccgccg ccgcgtccac ctgccggagc acgatcgcag 3361 caagccgggc cgccagatag tcaccttcct tctcatctgc aacgtggcca tgttcgccat 3421 ctacacattc gaagctcaaa aagtattcgc caatcctgta agtagatatg ttcagctgga 3481 gttctacggc tttgtgccct ggtcgatcat ccagcgcatc acactgcccc tgtgcatatt 3541 ccatcgattc cacagcgccg tgacactcgc cgagatctgg aagaccacct acaaggcacg 3601 cctggagtaa gatgtctata taggccgatg tgggagttat gaaaaaatgc accaaaccaa 3661 aatgtagcga gcccagaacg caaatagaaa tcaagtgaag agttagtttc taattacgta 3721 ttaaaaacat atatgcgtac tacatataat atacatatta tacattaatg cagatatgat 3781 tattattttt ttgtttgaca accaaagcaa agcgaaacga aatgagaaac gaaacgaacg 3841 aaccgatttg ttgattttgc cctgctttcc ttttttactt tgttaactcg tggaggactt 3901 aagaacttaa gaactaagtc atagcgttta cagtttaccc gaaggaaaac cacggcacac 3961 gtttttaatc tgagttacgt atttaatttt agttttagtt tagtttaaca cactgcaata 4021 tcttgttact aaatcgatga attcaaatta atattaattt cttaattgtt taacccttat 4081 ccgcttcggc agaaacagaa accaaaaaga aatcgattaa aaaattcaca taacaaataa 4141 gattgaaatt actataaacc aaaaaacaaa aaaggttgtt tacttttcgc gtattttttc 4201 gcgactgtga aaagtcaaga atcccgggaa aagcgaacat gaatgaacac gaactaaaac 4261 acaaaacagg gacacaaaaa gcaatgccat gaagaacgcg gccacaggaa acggaaacga 4321 aaggactttc ttaataaatt tgatctgact tttccgcaaa acaaccaata aacagtaaca 4381 gccgaaacaa caacaaactg tgatgaattt atttgattta ctggtattat ttaattttat 4441 ttccgttttg ttctctcgac ttgatttaat cacttaacct cttttgttat tttattctca 4501 gcttcacact tcactcactg agtcgacgca acttttgtaa gaatttagaa acaatggcga 4561 taagacaact tcatggccaa ttgtaaaaac aaattccccg aaacaccata aaagaaaaac 4621 ataaaatacg acaaaaaaaa tcaagagaaa actaagaaaa ttgtggcatt taatggccaa 4681 aaatacaaaa aaaaaaaaaa acaaacaatt tttaatatac attatataaa agtttataaa 4741 tgtccatttt ttgattatta gtagtgatgt taaaaaaaaa cataattaac gtaaacataa 4801 taatatatgt atgtatgtta tagcaaagaa tcggataaac caagacattc ttaagctaca 4861 ctcgaagaaa gaaatcagag aacttgtgaa ccaaacgaac aaaatctttc caagtgaatc 4921 cccgcattta tgaatgaaca tttttagata aagcgaaatg gagaaatcaa gtggagtgac 4981 aggaagagaa gggagaaacc attgacaagc atcaatttgt ttacagcaat gttaaaaaaa 5041 aaaaacgaaa cgaacatttt gaaagatata tatgccacgt atatctataa atatatgtat 5101 actaacccac caaattcaaa gtatttcaac gttttataca aggagacgat gcgcaagaca 5161 agagatcggg gcagctaacg acctgtccca ctcggatccc gaatcccgaa cccaagttcc 5221 tctaccccta ttaacccgaa aatcaaaaac ctcatcccaa ttacagctgc aatctaagtc 5281 agaaagcatc agtttgccaa agaccaaaga agataaagac aaagacgtta ccgaaaggcg 5341 ataaatcgat aaattgcgaa tccgattata atctgtaatc ataatccagt cttcaagtct 5401 acatatatat aatgcatgtt aactgtagac gctggttcaa gcagttcaag aagaatacgt 5461 atacaatact cgtaatccaa tcaaatgtaa tgtggtagca aaagcatagg taagccaagt 5521 cgaaaaatcg aacaaaccat taaagtagct cagcacacac acactcagtc actcacacga 5581 tcgatcactc atggatctgg gtattcagta ttcagtatcg agtattcagt attcagtatt 5641 cggtgaatca tatatccaaa cgtttgcgaa ttaaattcag tttgaaactt gtacttgcgt 5701 aggctcttag acattttact tgaatgcata cgcttcataa gtcacataca tacatatata 5761 tatatatatt taactataca tatatatata taaatataaa tttaaaaaag aattgttttt 5821 ttccttaaca tttagttaaa cgtaagattg aatcatattt tacgccgtac aaccgaacag 5881 aaaaaaagtg agcagaaaga aatatttatt aaatgtttca actaagttgt ataattataa 5941 gtgagaattt acataatgga attatgtatc tgtatctaag ccagacaaaa aaaaaacaaa 6001 aaacactgaa aacatttttg ggaaagcggc gaaagtaaaa aagagttggg aattcgaatt 6061 cgattaacgt taaaatattc agacagaaac ttaacgcaca agaacaaaag agatcaacac 6121 caaaagcagc tgctaaatcc caagaaaaca gaaaaccaaa tacaacatga acaatttata 6181 tgctcgtaag tatatagaca atttcaataa ctgataaaaa tatatataca agaaaaaaag 6241 cgaaatttac atgcaattca aatacatttt ccataaccgc atcaactaaa caacaattac 6301 aaacgaatta aagtggatga aaacgattcg aggaatgaat attataaatt atggatgtgc 6361 gaacgaaaac gccacaaaaa ccaaaaattg taagccattt tttaatcatt gtcgcattta 6421 agatatgata aacgagaacg aaatacaaaa ttcaaaaatt tctcagttct aaaaacacac 6481 gttcagaatc acactgacat tcgctcaata cattgagttc attgcataac gaatacaaaa 6541 attgacatac atacaacata aaaatgaagt aaacaaaaca tttgatggta aacgaacgta 6601 cagatgacat acaagtaatt ttaaattgaa taaaaactag tattaaatat gtacaacaaa 6661 aaa