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LOCUS XM_044396250 6669 bp mRNA linear INV 09-DEC-2024 transcript variant X7, mRNA. ACCESSION XM_044396250 VERSION XM_044396250.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044396250.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6669 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6669 /gene="OtopLa" /note="Otopetrin-like a; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108058416" CDS 812..3616 /gene="OtopLa" /codon_start=1 /product="proton channel OtopLc isoform X5" /protein_id="XP_044252185.1" /db_xref="GeneID:108058416" /translation="MQRCPYIHEMRERLLDQPRETLQLENMERANLLDNRQSASESNQ VGTVVKLQGDGYHTSPAHQRTPLVPHDLGEDFNLDFDDDFPIDARRPKNAKTSLFIVT SLVYAILLIVVCIAYVISDVTTHRLPVLYYETFFTYLYGVSILFLLYVFCFLLQESSC CNGGNGGSKPKPQPKEKKSKKAKNADPADSKDAKGSKDSGKAAKGAAYQEAPVDAEVA VTPKNVRKRKTTHSDLTHGSFFLRVGAIAFGLGAMIYIGLEFGSFFEIPFDSPCHHIL IGVNPLLQMIFTFMQMYFIFMNARLNIHRFKVIARFGLMHVVATNICVWIRTLVKESL LEITIYHQKNEPEAGASSIAHSIRQHALRHAGTVLRTHAGPNSEFEVLDGEDILPKDV YKSDNVLSKLVRNTVDGISKSLGMGGDLTSTSSTTSTTTRAPFTTPNYQWHSTTMARK LKKFITSATTAATTAAGGSGTTTTSSTTISPSTTTSTIDPSSSTTTTTTTFSPFSTTT ATNNNLETSSGLQRLLSSSANPPSLAPVDGFGSAVTPTSVSGSGSFMDSFLSSTLSPA SSTEGSASIMNNLFGQQGPMENSFQTYSDLGHEEVTGLVSFENLESLDNIYPAALSSN IGTLNSTACGRIDIMGTIVYDSAPYLYPFIIEYSLIGAVVLYVMWKHIGRYPGRMNDE DLEHRLEVMLSRRAVAMAQQQRSGRVDCVGSSKGLFFGLLLLVGALICLILFFVLVRH QQFSLLAIYLADASHCILMAFAILAIIVGFIRVKNLKFRCEEQSNLNDILLRISAFGL FTYSVFSIIAGSLKVLESEPSLLVTTTGGVAVFQVILQLLFIADVSRRRVHLPEHDRS KPGRQIVTFLLICNVAMFAIYTFEAQKVFANPVQLEFYGFVPWSIIQRITLPLCIFHR FHSAVTLAEIWKTTYKARLE" misc_feature 1529..>1972 /gene="OtopLa" /note="Region: Otopetrin; pfam03189" /db_xref="CDD:460840" misc_feature <2657..3556 /gene="OtopLa" /note="Region: Otopetrin; pfam03189" /db_xref="CDD:460840" polyA_site 6669 /gene="OtopLa" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgaacttttg cgagtgatgg aagacaagtt gtctcttctc agaccgtgag agacaaaagt 61 gctgggaaat aactaaaaat taaatcagca aaactaccga ataacgaata aaaacagaaa 121 gtgcgtcgtc gtccattttg tgtgtgttgt gcgtgtgtgc gtgtgtccat gtccttttgt 181 atttcgtatt ttggcccaca acgcaggaca ataatagcct aaatcaaccc gaaacaaaac 241 cgaaataata aaacaaaaac gcgcgcaaaa ccacgacccc ctctccacgc caaaacatct 301 tgttcttctt ctcgagcgga agcaaaacaa aaacaacagg acaacgccaa aagaaagtag 361 aaaagagaag cgaaatagaa agaagcaaga ggaagcgacc ccaaaagcac acacatatga 421 tctgaacggc aggatataac cccaaaaaaa acgaccaatc tgcgcaacca aaagtcttaa 481 accttcaact gctgctgcaa accgtatgac tgatttatca agttgagcaa accgtagcga 541 ttacctccct aagtacttta tactagctta caagcataaa catagtatat aaacccgcat 601 ttacggccgg atatatatta cgaatggcaa ggcaatagat ccaaatatat gtattggatt 661 gattatatcg taaaaagcta gaactgctgc attttgaaac tcccgtagat agtgtctaca 721 ctttagcata tatacatata tatttatctg atagataggg aagagcagag gagcagagaa 781 gggtcggaag agagagagag aggagcaagg aatgcagcgg tgtccctaca ttcatgagat 841 gcgcgaaaga ttactggacc agccacggga gacacttcaa ctggagaaca tggagcgggc 901 caatctgctc gacaaccgcc aatcggcatc cgaatccaac caggtcggca ctgtggtcaa 961 gctgcagggc gatggctatc acacgagtcc tgcacaccag cgcactccac tagtgcctca 1021 cgatctcggc gaggacttca atttggattt cgacgatgac tttccgatcg acgcccgacg 1081 accgaaaaat gccaagacat cgctgttcat cgtgaccagt ctggtgtacg cgatcctact 1141 gatcgtcgtc tgcattgcat acgtaatcag cgatgtaacc acccaccgac tgccggttct 1201 ctactacgag acattcttca catatctcta cggcgtcagc atactcttcc tcctttacgt 1261 cttctgtttc ctgctgcagg agagctcttg ctgcaatggc ggcaatggtg gcagcaaacc 1321 gaaaccccaa cccaaggaga agaagtcgaa gaaagccaaa aatgccgatc cggccgattc 1381 gaaggatgcg aagggctcta aggactcggg caaggcagcc aagggcgccg catatcagga 1441 agcacccgtg gatgccgagg tggccgtcac cccaaagaat gtgcgcaagc gcaagacaac 1501 ccatagtgac ctgacgcacg gtagcttttt tctgcgcgta ggagccattg ctttcggatt 1561 gggcgccatg atttatattg gcctggagtt tggatcgttc ttcgaaatac ccttcgattc 1621 gccatgccat cacattctga tcggcgtaaa cccactgctc caaatgatat tcaccttcat 1681 gcagatgtat ttcatattca tgaatgcccg gctgaacatc caccgcttca aggtgatcgc 1741 ccgctttggc ctgatgcacg tggtggccac caacatatgc gtgtggattc gcacgctggt 1801 caaggaatcg ctgctcgaga ttacgatcta tcaccagaag aacgaaccgg aggcgggagc 1861 ctcctccatt gcccattcga tacggcagca tgccctgcgt catgctggca ctgtgctgag 1921 aactcatgcg ggacccaata gcgagttcga ggttctcgac ggcgaggaca ttctgcccaa 1981 ggatgtgtac aaaagcgaca atgtgctgtc gaagctggtt cgcaatacag tggatggtat 2041 ttccaagagt ctgggaatgg gtggtgatct aaccagcact agtagcacca cctcgacgac 2101 gacgagggct ccgtttacca ctccgaacta ccaatggcac agcactacta tggcccgcaa 2161 gttgaagaag tttatcacca gcgccaccac agcggcgacc acggcggcgg gcggcagtgg 2221 caccaccacc accagtagca ccaccatctc accttcgacc accaccagta ccattgaccc 2281 atcatcgagc accaccacca ccaccaccac cttcagtcca tttagcacca ccactgccac 2341 gaataataat ctcgagacca gcagcggcct gcagcgcctt ctatcatcca gcgctaatcc 2401 gccgagcctg gcgccagtcg atgggttcgg ttccgctgtt acgcctactt ccgtttccgg 2461 ttcgggatcc tttatggatt ccttcctgtc cagcaccttg agcccggcaa gcagcaccga 2521 aggctcggcc agcataatga acaacctgtt cggccagcag ggacccatgg agaatagctt 2581 ccaaacgtat tcggatctgg gccacgaaga ggtcaccggg ctggttagct tcgagaattt 2641 ggagagcctg gacaatatct acccggcggc cctgtcctcc aatatcggca cactcaactc 2701 caccgcctgc ggaaggatcg atataatggg caccattgtc tacgattcgg cgccgtatct 2761 gtatccattt attatcgaat actcgctgat cggggcggtg gttttgtatg tcatgtggaa 2821 gcatatcggt cgctatcccg gcaggatgaa cgatgaggac ttggagcacc ggctggaggt 2881 gatgctatcg cgcagggcgg tggccatggc gcagcagcag cgatccggac gcgttgactg 2941 cgtcggctcg tcgaagggcc tgttctttgg gctcctgctg ctggtcggag cgctcatctg 3001 cctgatactc ttcttcgtct tggtgcgcca tcagcagttc tcgctgttgg ccatttacct 3061 cgccgacgcc agccactgca ttctgatggc ctttgccata ctggccatta tagttggatt 3121 tatcagggtc aagaacctga agttccgctg cgaggagcag tcgaacctga acgacatatt 3181 gctgcgcata tcggcctttg gcctgttcac ctactcggtg ttcagcatca tcgccggcag 3241 cctgaaggtc ctggagagcg agccgagcct gctggtgacg accaccgggg gcgtggccgt 3301 cttccaggtg atcctgcagc tgctcttcat cgccgatgtg tcccgccgcc gcgtccacct 3361 gccggagcac gatcgcagca agccgggccg ccagatagtc accttccttc tcatctgcaa 3421 cgtggccatg ttcgccatct acacattcga agctcaaaaa gtattcgcca atcctgttca 3481 gctggagttc tacggctttg tgccctggtc gatcatccag cgcatcacac tgcccctgtg 3541 catattccat cgattccaca gcgccgtgac actcgccgag atctggaaga ccacctacaa 3601 ggcacgcctg gagtaagatg tctatatagg ccgatgtggg agttatgaaa aaatgcacca 3661 aaccaaaatg tagcgagccc agaacgcaaa tagaaatcaa gtgaagagtt agtttctaat 3721 tacgtattaa aaacatatat gcgtactaca tataatatac atattataca ttaatgcaga 3781 tatgattatt atttttttgt ttgacaacca aagcaaagcg aaacgaaatg agaaacgaaa 3841 cgaacgaacc gatttgttga ttttgccctg ctttcctttt ttactttgtt aactcgtgga 3901 ggacttaaga acttaagaac taagtcatag cgtttacagt ttacccgaag gaaaaccacg 3961 gcacacgttt ttaatctgag ttacgtattt aattttagtt ttagtttagt ttaacacact 4021 gcaatatctt gttactaaat cgatgaattc aaattaatat taatttctta attgtttaac 4081 ccttatccgc ttcggcagaa acagaaacca aaaagaaatc gattaaaaaa ttcacataac 4141 aaataagatt gaaattacta taaaccaaaa aacaaaaaag gttgtttact tttcgcgtat 4201 tttttcgcga ctgtgaaaag tcaagaatcc cgggaaaagc gaacatgaat gaacacgaac 4261 taaaacacaa aacagggaca caaaaagcaa tgccatgaag aacgcggcca caggaaacgg 4321 aaacgaaagg actttcttaa taaatttgat ctgacttttc cgcaaaacaa ccaataaaca 4381 gtaacagccg aaacaacaac aaactgtgat gaatttattt gatttactgg tattatttaa 4441 ttttatttcc gttttgttct ctcgacttga tttaatcact taacctcttt tgttatttta 4501 ttctcagctt cacacttcac tcactgagtc gacgcaactt ttgtaagaat ttagaaacaa 4561 tggcgataag acaacttcat ggccaattgt aaaaacaaat tccccgaaac accataaaag 4621 aaaaacataa aatacgacaa aaaaaatcaa gagaaaacta agaaaattgt ggcatttaat 4681 ggccaaaaat acaaaaaaaa aaaaaaacaa acaattttta atatacatta tataaaagtt 4741 tataaatgtc cattttttga ttattagtag tgatgttaaa aaaaaacata attaacgtaa 4801 acataataat atatgtatgt atgttatagc aaagaatcgg ataaaccaag acattcttaa 4861 gctacactcg aagaaagaaa tcagagaact tgtgaaccaa acgaacaaaa tctttccaag 4921 tgaatccccg catttatgaa tgaacatttt tagataaagc gaaatggaga aatcaagtgg 4981 agtgacagga agagaaggga gaaaccattg acaagcatca atttgtttac agcaatgtta 5041 aaaaaaaaaa acgaaacgaa cattttgaaa gatatatatg ccacgtatat ctataaatat 5101 atgtatacta acccaccaaa ttcaaagtat ttcaacgttt tatacaagga gacgatgcgc 5161 aagacaagag atcggggcag ctaacgacct gtcccactcg gatcccgaat cccgaaccca 5221 agttcctcta cccctattaa cccgaaaatc aaaaacctca tcccaattac agctgcaatc 5281 taagtcagaa agcatcagtt tgccaaagac caaagaagat aaagacaaag acgttaccga 5341 aaggcgataa atcgataaat tgcgaatccg attataatct gtaatcataa tccagtcttc 5401 aagtctacat atatataatg catgttaact gtagacgctg gttcaagcag ttcaagaaga 5461 atacgtatac aatactcgta atccaatcaa atgtaatgtg gtagcaaaag cataggtaag 5521 ccaagtcgaa aaatcgaaca aaccattaaa gtagctcagc acacacacac tcagtcactc 5581 acacgatcga tcactcatgg atctgggtat tcagtattca gtatcgagta ttcagtattc 5641 agtattcggt gaatcatata tccaaacgtt tgcgaattaa attcagtttg aaacttgtac 5701 ttgcgtaggc tcttagacat tttacttgaa tgcatacgct tcataagtca catacataca 5761 tatatatata tatatttaac tatacatata tatatataaa tataaattta aaaaagaatt 5821 gtttttttcc ttaacattta gttaaacgta agattgaatc atattttacg ccgtacaacc 5881 gaacagaaaa aaagtgagca gaaagaaata tttattaaat gtttcaacta agttgtataa 5941 ttataagtga gaatttacat aatggaatta tgtatctgta tctaagccag acaaaaaaaa 6001 aacaaaaaac actgaaaaca tttttgggaa agcggcgaaa gtaaaaaaga gttgggaatt 6061 cgaattcgat taacgttaaa atattcagac agaaacttaa cgcacaagaa caaaagagat 6121 caacaccaaa agcagctgct aaatcccaag aaaacagaaa accaaataca acatgaacaa 6181 tttatatgct cgtaagtata tagacaattt caataactga taaaaatata tatacaagaa 6241 aaaaagcgaa atttacatgc aattcaaata cattttccat aaccgcatca actaaacaac 6301 aattacaaac gaattaaagt ggatgaaaac gattcgagga atgaatatta taaattatgg 6361 atgtgcgaac gaaaacgcca caaaaaccaa aaattgtaag ccatttttta atcattgtcg 6421 catttaagat atgataaacg agaacgaaat acaaaattca aaaatttctc agttctaaaa 6481 acacacgttc agaatcacac tgacattcgc tcaatacatt gagttcattg cataacgaat 6541 acaaaaattg acatacatac aacataaaaa tgaagtaaac aaaacatttg atggtaaacg 6601 aacgtacaga tgacatacaa gtaattttaa attgaataaa aactagtatt aaatatgtac 6661 aacaaaaaa