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LOCUS XM_044396249 6681 bp mRNA linear INV 09-DEC-2024 transcript variant X6, mRNA. ACCESSION XM_044396249 VERSION XM_044396249.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044396249.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6681 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6681 /gene="OtopLa" /note="Otopetrin-like a; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108058416" CDS 812..3628 /gene="OtopLa" /codon_start=1 /product="proton channel OtopLc isoform X4" /protein_id="XP_044252184.1" /db_xref="GeneID:108058416" /translation="MQRCPYIHEMRERLLDQPRETLQLENMERANLLDNRQSASESNQ LQGDGYHTSPAHQRTPLVPHDLGEDFNLDFDDDFPIDARRPKNAKTSLFIVTSLVYAI LLIVVCIAYVISDVTTHRLPVLYYETFFTYLYGVSILFLLYVFCFLLQESSCCNGGNG GSKPKPQPKEKKSKKAKNADPADSKDAKGSKDSGKAAKGAAYQEAPVDAEVAVTPKNV RKRKTTHSDLTHGSFFLRVGAIAFGLGAMIYIGLEFGSFFEIPFDSPCHHILIGVNPL LQMIFTFMQMYFIFMNARTRPPFQLNIHRFKVIARFGLMHVVATNICVWIRTLVKESL LEITIYHQKNEPEAGASSIAHSIRQHALRHAGTVLRTHAGPNSEFEVLDGEDILPKDV YKSDNVLSKLVRNTVDGISKSLGMGGDLTSTSSTTSTTTRAPFTTPNYQWHSTTMARK LKKFITSATTAATTAAGGSGTTTTSSTTISPSTTTSTIDPSSSTTTTTTTFSPFSTTT ATNNNLETSSGLQRLLSSSANPPSLAPVDGFGSAVTPTSVSGSGSFMDSFLSSTLSPA SSTEGSASIMNNLFGQQGPMENSFQTYSDLGHEEVTGLVSFENLESLDNIYPAALSSN IGTLNSTACGRIDIMGTIVYDSAPYLYPFIIEYSLIGAVVLYVMWKHIGRYPGRMNDE DLEHRLEVMLSRRAVAMAQQQRSGRVDCVGSSKGLFFGLLLLVGALICLILFFVLVRH QQFSLLAIYLADASHCILMAFAILAIIVGFIRVKNLKFRCEEQSNLNDILLRISAFGL FTYSVFSIIAGSLKVLESEPSLLVTTTGGVAVFQVILQLLFIADVSRRRVHLPEHDRS KPGRQIVTFLLICNVAMFAIYTFEAQKVFANPVSRYVQLEFYGFVPWSIIQRITLPLC IFHRFHSAVTLAEIWKTTYKARLE" misc_feature 1511..>1972 /gene="OtopLa" /note="Region: Otopetrin; pfam03189" /db_xref="CDD:460840" misc_feature <2657..3568 /gene="OtopLa" /note="Region: Otopetrin; pfam03189" /db_xref="CDD:460840" polyA_site 6681 /gene="OtopLa" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgaacttttg cgagtgatgg aagacaagtt gtctcttctc agaccgtgag agacaaaagt 61 gctgggaaat aactaaaaat taaatcagca aaactaccga ataacgaata aaaacagaaa 121 gtgcgtcgtc gtccattttg tgtgtgttgt gcgtgtgtgc gtgtgtccat gtccttttgt 181 atttcgtatt ttggcccaca acgcaggaca ataatagcct aaatcaaccc gaaacaaaac 241 cgaaataata aaacaaaaac gcgcgcaaaa ccacgacccc ctctccacgc caaaacatct 301 tgttcttctt ctcgagcgga agcaaaacaa aaacaacagg acaacgccaa aagaaagtag 361 aaaagagaag cgaaatagaa agaagcaaga ggaagcgacc ccaaaagcac acacatatga 421 tctgaacggc aggatataac cccaaaaaaa acgaccaatc tgcgcaacca aaagtcttaa 481 accttcaact gctgctgcaa accgtatgac tgatttatca agttgagcaa accgtagcga 541 ttacctccct aagtacttta tactagctta caagcataaa catagtatat aaacccgcat 601 ttacggccgg atatatatta cgaatggcaa ggcaatagat ccaaatatat gtattggatt 661 gattatatcg taaaaagcta gaactgctgc attttgaaac tcccgtagat agtgtctaca 721 ctttagcata tatacatata tatttatctg atagataggg aagagcagag gagcagagaa 781 gggtcggaag agagagagag aggagcaagg aatgcagcgg tgtccctaca ttcatgagat 841 gcgcgaaaga ttactggacc agccacggga gacacttcaa ctggagaaca tggagcgggc 901 caatctgctc gacaaccgcc aatcggcatc cgaatccaac cagctgcagg gcgatggcta 961 tcacacgagt cctgcacacc agcgcactcc actagtgcct cacgatctcg gcgaggactt 1021 caatttggat ttcgacgatg actttccgat cgacgcccga cgaccgaaaa atgccaagac 1081 atcgctgttc atcgtgacca gtctggtgta cgcgatccta ctgatcgtcg tctgcattgc 1141 atacgtaatc agcgatgtaa ccacccaccg actgccggtt ctctactacg agacattctt 1201 cacatatctc tacggcgtca gcatactctt cctcctttac gtcttctgtt tcctgctgca 1261 ggagagctct tgctgcaatg gcggcaatgg tggcagcaaa ccgaaacccc aacccaagga 1321 gaagaagtcg aagaaagcca aaaatgccga tccggccgat tcgaaggatg cgaagggctc 1381 taaggactcg ggcaaggcag ccaagggcgc cgcatatcag gaagcacccg tggatgccga 1441 ggtggccgtc accccaaaga atgtgcgcaa gcgcaagaca acccatagtg acctgacgca 1501 cggtagcttt tttctgcgcg taggagccat tgctttcgga ttgggcgcca tgatttatat 1561 tggcctggag tttggatcgt tcttcgaaat acccttcgat tcgccatgcc atcacattct 1621 gatcggcgta aacccactgc tccaaatgat attcaccttc atgcagatgt atttcatatt 1681 catgaatgcc cggactaggc cgccatttca gctgaacatc caccgcttca aggtgatcgc 1741 ccgctttggc ctgatgcacg tggtggccac caacatatgc gtgtggattc gcacgctggt 1801 caaggaatcg ctgctcgaga ttacgatcta tcaccagaag aacgaaccgg aggcgggagc 1861 ctcctccatt gcccattcga tacggcagca tgccctgcgt catgctggca ctgtgctgag 1921 aactcatgcg ggacccaata gcgagttcga ggttctcgac ggcgaggaca ttctgcccaa 1981 ggatgtgtac aaaagcgaca atgtgctgtc gaagctggtt cgcaatacag tggatggtat 2041 ttccaagagt ctgggaatgg gtggtgatct aaccagcact agtagcacca cctcgacgac 2101 gacgagggct ccgtttacca ctccgaacta ccaatggcac agcactacta tggcccgcaa 2161 gttgaagaag tttatcacca gcgccaccac agcggcgacc acggcggcgg gcggcagtgg 2221 caccaccacc accagtagca ccaccatctc accttcgacc accaccagta ccattgaccc 2281 atcatcgagc accaccacca ccaccaccac cttcagtcca tttagcacca ccactgccac 2341 gaataataat ctcgagacca gcagcggcct gcagcgcctt ctatcatcca gcgctaatcc 2401 gccgagcctg gcgccagtcg atgggttcgg ttccgctgtt acgcctactt ccgtttccgg 2461 ttcgggatcc tttatggatt ccttcctgtc cagcaccttg agcccggcaa gcagcaccga 2521 aggctcggcc agcataatga acaacctgtt cggccagcag ggacccatgg agaatagctt 2581 ccaaacgtat tcggatctgg gccacgaaga ggtcaccggg ctggttagct tcgagaattt 2641 ggagagcctg gacaatatct acccggcggc cctgtcctcc aatatcggca cactcaactc 2701 caccgcctgc ggaaggatcg atataatggg caccattgtc tacgattcgg cgccgtatct 2761 gtatccattt attatcgaat actcgctgat cggggcggtg gttttgtatg tcatgtggaa 2821 gcatatcggt cgctatcccg gcaggatgaa cgatgaggac ttggagcacc ggctggaggt 2881 gatgctatcg cgcagggcgg tggccatggc gcagcagcag cgatccggac gcgttgactg 2941 cgtcggctcg tcgaagggcc tgttctttgg gctcctgctg ctggtcggag cgctcatctg 3001 cctgatactc ttcttcgtct tggtgcgcca tcagcagttc tcgctgttgg ccatttacct 3061 cgccgacgcc agccactgca ttctgatggc ctttgccata ctggccatta tagttggatt 3121 tatcagggtc aagaacctga agttccgctg cgaggagcag tcgaacctga acgacatatt 3181 gctgcgcata tcggcctttg gcctgttcac ctactcggtg ttcagcatca tcgccggcag 3241 cctgaaggtc ctggagagcg agccgagcct gctggtgacg accaccgggg gcgtggccgt 3301 cttccaggtg atcctgcagc tgctcttcat cgccgatgtg tcccgccgcc gcgtccacct 3361 gccggagcac gatcgcagca agccgggccg ccagatagtc accttccttc tcatctgcaa 3421 cgtggccatg ttcgccatct acacattcga agctcaaaaa gtattcgcca atcctgtaag 3481 tagatatgtt cagctggagt tctacggctt tgtgccctgg tcgatcatcc agcgcatcac 3541 actgcccctg tgcatattcc atcgattcca cagcgccgtg acactcgccg agatctggaa 3601 gaccacctac aaggcacgcc tggagtaaga tgtctatata ggccgatgtg ggagttatga 3661 aaaaatgcac caaaccaaaa tgtagcgagc ccagaacgca aatagaaatc aagtgaagag 3721 ttagtttcta attacgtatt aaaaacatat atgcgtacta catataatat acatattata 3781 cattaatgca gatatgatta ttattttttt gtttgacaac caaagcaaag cgaaacgaaa 3841 tgagaaacga aacgaacgaa ccgatttgtt gattttgccc tgctttcctt ttttactttg 3901 ttaactcgtg gaggacttaa gaacttaaga actaagtcat agcgtttaca gtttacccga 3961 aggaaaacca cggcacacgt ttttaatctg agttacgtat ttaattttag ttttagttta 4021 gtttaacaca ctgcaatatc ttgttactaa atcgatgaat tcaaattaat attaatttct 4081 taattgttta acccttatcc gcttcggcag aaacagaaac caaaaagaaa tcgattaaaa 4141 aattcacata acaaataaga ttgaaattac tataaaccaa aaaacaaaaa aggttgttta 4201 cttttcgcgt attttttcgc gactgtgaaa agtcaagaat cccgggaaaa gcgaacatga 4261 atgaacacga actaaaacac aaaacaggga cacaaaaagc aatgccatga agaacgcggc 4321 cacaggaaac ggaaacgaaa ggactttctt aataaatttg atctgacttt tccgcaaaac 4381 aaccaataaa cagtaacagc cgaaacaaca acaaactgtg atgaatttat ttgatttact 4441 ggtattattt aattttattt ccgttttgtt ctctcgactt gatttaatca cttaacctct 4501 tttgttattt tattctcagc ttcacacttc actcactgag tcgacgcaac ttttgtaaga 4561 atttagaaac aatggcgata agacaacttc atggccaatt gtaaaaacaa attccccgaa 4621 acaccataaa agaaaaacat aaaatacgac aaaaaaaatc aagagaaaac taagaaaatt 4681 gtggcattta atggccaaaa atacaaaaaa aaaaaaaaac aaacaatttt taatatacat 4741 tatataaaag tttataaatg tccatttttt gattattagt agtgatgtta aaaaaaaaca 4801 taattaacgt aaacataata atatatgtat gtatgttata gcaaagaatc ggataaacca 4861 agacattctt aagctacact cgaagaaaga aatcagagaa cttgtgaacc aaacgaacaa 4921 aatctttcca agtgaatccc cgcatttatg aatgaacatt tttagataaa gcgaaatgga 4981 gaaatcaagt ggagtgacag gaagagaagg gagaaaccat tgacaagcat caatttgttt 5041 acagcaatgt taaaaaaaaa aaacgaaacg aacattttga aagatatata tgccacgtat 5101 atctataaat atatgtatac taacccacca aattcaaagt atttcaacgt tttatacaag 5161 gagacgatgc gcaagacaag agatcggggc agctaacgac ctgtcccact cggatcccga 5221 atcccgaacc caagttcctc tacccctatt aacccgaaaa tcaaaaacct catcccaatt 5281 acagctgcaa tctaagtcag aaagcatcag tttgccaaag accaaagaag ataaagacaa 5341 agacgttacc gaaaggcgat aaatcgataa attgcgaatc cgattataat ctgtaatcat 5401 aatccagtct tcaagtctac atatatataa tgcatgttaa ctgtagacgc tggttcaagc 5461 agttcaagaa gaatacgtat acaatactcg taatccaatc aaatgtaatg tggtagcaaa 5521 agcataggta agccaagtcg aaaaatcgaa caaaccatta aagtagctca gcacacacac 5581 actcagtcac tcacacgatc gatcactcat ggatctgggt attcagtatt cagtatcgag 5641 tattcagtat tcagtattcg gtgaatcata tatccaaacg tttgcgaatt aaattcagtt 5701 tgaaacttgt acttgcgtag gctcttagac attttacttg aatgcatacg cttcataagt 5761 cacatacata catatatata tatatattta actatacata tatatatata aatataaatt 5821 taaaaaagaa ttgttttttt ccttaacatt tagttaaacg taagattgaa tcatatttta 5881 cgccgtacaa ccgaacagaa aaaaagtgag cagaaagaaa tatttattaa atgtttcaac 5941 taagttgtat aattataagt gagaatttac ataatggaat tatgtatctg tatctaagcc 6001 agacaaaaaa aaaacaaaaa acactgaaaa catttttggg aaagcggcga aagtaaaaaa 6061 gagttgggaa ttcgaattcg attaacgtta aaatattcag acagaaactt aacgcacaag 6121 aacaaaagag atcaacacca aaagcagctg ctaaatccca agaaaacaga aaaccaaata 6181 caacatgaac aatttatatg ctcgtaagta tatagacaat ttcaataact gataaaaata 6241 tatatacaag aaaaaaagcg aaatttacat gcaattcaaa tacattttcc ataaccgcat 6301 caactaaaca acaattacaa acgaattaaa gtggatgaaa acgattcgag gaatgaatat 6361 tataaattat ggatgtgcga acgaaaacgc cacaaaaacc aaaaattgta agccattttt 6421 taatcattgt cgcatttaag atatgataaa cgagaacgaa atacaaaatt caaaaatttc 6481 tcagttctaa aaacacacgt tcagaatcac actgacattc gctcaataca ttgagttcat 6541 tgcataacga atacaaaaat tgacatacat acaacataaa aatgaagtaa acaaaacatt 6601 tgatggtaaa cgaacgtaca gatgacatac aagtaatttt aaattgaata aaaactagta 6661 ttaaatatgt acaacaaaaa a