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LOCUS XM_044396247 6687 bp mRNA linear INV 09-DEC-2024 transcript variant X4, mRNA. ACCESSION XM_044396247 VERSION XM_044396247.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044396247.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6687 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6687 /gene="OtopLa" /note="Otopetrin-like a; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108058416" CDS 812..3634 /gene="OtopLa" /codon_start=1 /product="proton channel OtopLc isoform X2" /protein_id="XP_044252182.1" /db_xref="GeneID:108058416" /translation="MQRCPYIHEMRERLLDQPRETLQLENMERANLLDNRQSASESNQ VGTVVKLQGDGYHTSPAHQRTPLVPHDLGEDFNLDFDDDFPIDARRPKNAKTSLFIVT SLVYAILLIVVCIAYVISDVTTHRLPVLYYETFFTYLYGVSILFLLYVFCFLLQESSC CNGGNGGSKPKPQPKEKKSKKAKNADPADSKDAKGSKDSGKAAKGAAYQEAPVDAEVA VTPKNVRKRKTTHSDLTHGSFFLRVGAIAFGLGAMIYIGLEFGSFFEIPFDSPCHHIL IGVNPLLQMIFTFMQMYFIFMNARTRPPFQLNIHRFKVIARFGLMHVVATNICVWIRT LVKESLLEITIYHQKNEPEAGASSIAHSIRQHALRHAGTVLRTHAGPNSEFEVLDGED ILPKDVYKSDNVLSKLVRNTVDGISKSLGMGGDLTSTSSTTSTTTRAPFTTPNYQWHS TTMARKLKKFITSATTAATTAAGGSGTTTTSSTTISPSTTTSTIDPSSSTTTTTTTFS PFSTTTATNNNLETSSGLQRLLSSSANPPSLAPVDGFGSAVTPTSVSGSGSFMDSFLS STLSPASSTEGSASIMNNLFGQQGPMENSFQTYSDLGHEEVTGLVSFENLESLDNIYP AALSSNIGTLNSTACGRIDIMGTIVYDSAPYLYPFIIEYSLIGAVVLYVMWKHIGRYP GRMNDEDLEHRLEVMLSRRAVAMAQQQRSGRVDCVGSSKGLFFGLLLLVGALICLILF FVLVRHQQFSLLAIYLADASHCILMAFAILAIIVGFIRVKNLKFRCEEQSNLNDILLR ISAFGLFTYSVFSIIAGSLKVLESEPSLLVTTTGGVAVFQVILQLLFIADVSRRRVHL PEHDRSKPGRQIVTFLLICNVAMFAIYTFEAQKVFANPVQLEFYGFVPWSIIQRITLP LCIFHRFHSAVTLAEIWKTTYKARLE" misc_feature 1529..>1990 /gene="OtopLa" /note="Region: Otopetrin; pfam03189" /db_xref="CDD:460840" misc_feature <2675..3574 /gene="OtopLa" /note="Region: Otopetrin; pfam03189" /db_xref="CDD:460840" polyA_site 6687 /gene="OtopLa" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgaacttttg cgagtgatgg aagacaagtt gtctcttctc agaccgtgag agacaaaagt 61 gctgggaaat aactaaaaat taaatcagca aaactaccga ataacgaata aaaacagaaa 121 gtgcgtcgtc gtccattttg tgtgtgttgt gcgtgtgtgc gtgtgtccat gtccttttgt 181 atttcgtatt ttggcccaca acgcaggaca ataatagcct aaatcaaccc gaaacaaaac 241 cgaaataata aaacaaaaac gcgcgcaaaa ccacgacccc ctctccacgc caaaacatct 301 tgttcttctt ctcgagcgga agcaaaacaa aaacaacagg acaacgccaa aagaaagtag 361 aaaagagaag cgaaatagaa agaagcaaga ggaagcgacc ccaaaagcac acacatatga 421 tctgaacggc aggatataac cccaaaaaaa acgaccaatc tgcgcaacca aaagtcttaa 481 accttcaact gctgctgcaa accgtatgac tgatttatca agttgagcaa accgtagcga 541 ttacctccct aagtacttta tactagctta caagcataaa catagtatat aaacccgcat 601 ttacggccgg atatatatta cgaatggcaa ggcaatagat ccaaatatat gtattggatt 661 gattatatcg taaaaagcta gaactgctgc attttgaaac tcccgtagat agtgtctaca 721 ctttagcata tatacatata tatttatctg atagataggg aagagcagag gagcagagaa 781 gggtcggaag agagagagag aggagcaagg aatgcagcgg tgtccctaca ttcatgagat 841 gcgcgaaaga ttactggacc agccacggga gacacttcaa ctggagaaca tggagcgggc 901 caatctgctc gacaaccgcc aatcggcatc cgaatccaac caggtcggca ctgtggtcaa 961 gctgcagggc gatggctatc acacgagtcc tgcacaccag cgcactccac tagtgcctca 1021 cgatctcggc gaggacttca atttggattt cgacgatgac tttccgatcg acgcccgacg 1081 accgaaaaat gccaagacat cgctgttcat cgtgaccagt ctggtgtacg cgatcctact 1141 gatcgtcgtc tgcattgcat acgtaatcag cgatgtaacc acccaccgac tgccggttct 1201 ctactacgag acattcttca catatctcta cggcgtcagc atactcttcc tcctttacgt 1261 cttctgtttc ctgctgcagg agagctcttg ctgcaatggc ggcaatggtg gcagcaaacc 1321 gaaaccccaa cccaaggaga agaagtcgaa gaaagccaaa aatgccgatc cggccgattc 1381 gaaggatgcg aagggctcta aggactcggg caaggcagcc aagggcgccg catatcagga 1441 agcacccgtg gatgccgagg tggccgtcac cccaaagaat gtgcgcaagc gcaagacaac 1501 ccatagtgac ctgacgcacg gtagcttttt tctgcgcgta ggagccattg ctttcggatt 1561 gggcgccatg atttatattg gcctggagtt tggatcgttc ttcgaaatac ccttcgattc 1621 gccatgccat cacattctga tcggcgtaaa cccactgctc caaatgatat tcaccttcat 1681 gcagatgtat ttcatattca tgaatgcccg gactaggccg ccatttcagc tgaacatcca 1741 ccgcttcaag gtgatcgccc gctttggcct gatgcacgtg gtggccacca acatatgcgt 1801 gtggattcgc acgctggtca aggaatcgct gctcgagatt acgatctatc accagaagaa 1861 cgaaccggag gcgggagcct cctccattgc ccattcgata cggcagcatg ccctgcgtca 1921 tgctggcact gtgctgagaa ctcatgcggg acccaatagc gagttcgagg ttctcgacgg 1981 cgaggacatt ctgcccaagg atgtgtacaa aagcgacaat gtgctgtcga agctggttcg 2041 caatacagtg gatggtattt ccaagagtct gggaatgggt ggtgatctaa ccagcactag 2101 tagcaccacc tcgacgacga cgagggctcc gtttaccact ccgaactacc aatggcacag 2161 cactactatg gcccgcaagt tgaagaagtt tatcaccagc gccaccacag cggcgaccac 2221 ggcggcgggc ggcagtggca ccaccaccac cagtagcacc accatctcac cttcgaccac 2281 caccagtacc attgacccat catcgagcac caccaccacc accaccacct tcagtccatt 2341 tagcaccacc actgccacga ataataatct cgagaccagc agcggcctgc agcgccttct 2401 atcatccagc gctaatccgc cgagcctggc gccagtcgat gggttcggtt ccgctgttac 2461 gcctacttcc gtttccggtt cgggatcctt tatggattcc ttcctgtcca gcaccttgag 2521 cccggcaagc agcaccgaag gctcggccag cataatgaac aacctgttcg gccagcaggg 2581 acccatggag aatagcttcc aaacgtattc ggatctgggc cacgaagagg tcaccgggct 2641 ggttagcttc gagaatttgg agagcctgga caatatctac ccggcggccc tgtcctccaa 2701 tatcggcaca ctcaactcca ccgcctgcgg aaggatcgat ataatgggca ccattgtcta 2761 cgattcggcg ccgtatctgt atccatttat tatcgaatac tcgctgatcg gggcggtggt 2821 tttgtatgtc atgtggaagc atatcggtcg ctatcccggc aggatgaacg atgaggactt 2881 ggagcaccgg ctggaggtga tgctatcgcg cagggcggtg gccatggcgc agcagcagcg 2941 atccggacgc gttgactgcg tcggctcgtc gaagggcctg ttctttgggc tcctgctgct 3001 ggtcggagcg ctcatctgcc tgatactctt cttcgtcttg gtgcgccatc agcagttctc 3061 gctgttggcc atttacctcg ccgacgccag ccactgcatt ctgatggcct ttgccatact 3121 ggccattata gttggattta tcagggtcaa gaacctgaag ttccgctgcg aggagcagtc 3181 gaacctgaac gacatattgc tgcgcatatc ggcctttggc ctgttcacct actcggtgtt 3241 cagcatcatc gccggcagcc tgaaggtcct ggagagcgag ccgagcctgc tggtgacgac 3301 caccgggggc gtggccgtct tccaggtgat cctgcagctg ctcttcatcg ccgatgtgtc 3361 ccgccgccgc gtccacctgc cggagcacga tcgcagcaag ccgggccgcc agatagtcac 3421 cttccttctc atctgcaacg tggccatgtt cgccatctac acattcgaag ctcaaaaagt 3481 attcgccaat cctgttcagc tggagttcta cggctttgtg ccctggtcga tcatccagcg 3541 catcacactg cccctgtgca tattccatcg attccacagc gccgtgacac tcgccgagat 3601 ctggaagacc acctacaagg cacgcctgga gtaagatgtc tatataggcc gatgtgggag 3661 ttatgaaaaa atgcaccaaa ccaaaatgta gcgagcccag aacgcaaata gaaatcaagt 3721 gaagagttag tttctaatta cgtattaaaa acatatatgc gtactacata taatatacat 3781 attatacatt aatgcagata tgattattat ttttttgttt gacaaccaaa gcaaagcgaa 3841 acgaaatgag aaacgaaacg aacgaaccga tttgttgatt ttgccctgct ttcctttttt 3901 actttgttaa ctcgtggagg acttaagaac ttaagaacta agtcatagcg tttacagttt 3961 acccgaagga aaaccacggc acacgttttt aatctgagtt acgtatttaa ttttagtttt 4021 agtttagttt aacacactgc aatatcttgt tactaaatcg atgaattcaa attaatatta 4081 atttcttaat tgtttaaccc ttatccgctt cggcagaaac agaaaccaaa aagaaatcga 4141 ttaaaaaatt cacataacaa ataagattga aattactata aaccaaaaaa caaaaaaggt 4201 tgtttacttt tcgcgtattt tttcgcgact gtgaaaagtc aagaatcccg ggaaaagcga 4261 acatgaatga acacgaacta aaacacaaaa cagggacaca aaaagcaatg ccatgaagaa 4321 cgcggccaca ggaaacggaa acgaaaggac tttcttaata aatttgatct gacttttccg 4381 caaaacaacc aataaacagt aacagccgaa acaacaacaa actgtgatga atttatttga 4441 tttactggta ttatttaatt ttatttccgt tttgttctct cgacttgatt taatcactta 4501 acctcttttg ttattttatt ctcagcttca cacttcactc actgagtcga cgcaactttt 4561 gtaagaattt agaaacaatg gcgataagac aacttcatgg ccaattgtaa aaacaaattc 4621 cccgaaacac cataaaagaa aaacataaaa tacgacaaaa aaaatcaaga gaaaactaag 4681 aaaattgtgg catttaatgg ccaaaaatac aaaaaaaaaa aaaaacaaac aatttttaat 4741 atacattata taaaagttta taaatgtcca ttttttgatt attagtagtg atgttaaaaa 4801 aaaacataat taacgtaaac ataataatat atgtatgtat gttatagcaa agaatcggat 4861 aaaccaagac attcttaagc tacactcgaa gaaagaaatc agagaacttg tgaaccaaac 4921 gaacaaaatc tttccaagtg aatccccgca tttatgaatg aacattttta gataaagcga 4981 aatggagaaa tcaagtggag tgacaggaag agaagggaga aaccattgac aagcatcaat 5041 ttgtttacag caatgttaaa aaaaaaaaac gaaacgaaca ttttgaaaga tatatatgcc 5101 acgtatatct ataaatatat gtatactaac ccaccaaatt caaagtattt caacgtttta 5161 tacaaggaga cgatgcgcaa gacaagagat cggggcagct aacgacctgt cccactcgga 5221 tcccgaatcc cgaacccaag ttcctctacc cctattaacc cgaaaatcaa aaacctcatc 5281 ccaattacag ctgcaatcta agtcagaaag catcagtttg ccaaagacca aagaagataa 5341 agacaaagac gttaccgaaa ggcgataaat cgataaattg cgaatccgat tataatctgt 5401 aatcataatc cagtcttcaa gtctacatat atataatgca tgttaactgt agacgctggt 5461 tcaagcagtt caagaagaat acgtatacaa tactcgtaat ccaatcaaat gtaatgtggt 5521 agcaaaagca taggtaagcc aagtcgaaaa atcgaacaaa ccattaaagt agctcagcac 5581 acacacactc agtcactcac acgatcgatc actcatggat ctgggtattc agtattcagt 5641 atcgagtatt cagtattcag tattcggtga atcatatatc caaacgtttg cgaattaaat 5701 tcagtttgaa acttgtactt gcgtaggctc ttagacattt tacttgaatg catacgcttc 5761 ataagtcaca tacatacata tatatatata tatttaacta tacatatata tatataaata 5821 taaatttaaa aaagaattgt ttttttcctt aacatttagt taaacgtaag attgaatcat 5881 attttacgcc gtacaaccga acagaaaaaa agtgagcaga aagaaatatt tattaaatgt 5941 ttcaactaag ttgtataatt ataagtgaga atttacataa tggaattatg tatctgtatc 6001 taagccagac aaaaaaaaaa caaaaaacac tgaaaacatt tttgggaaag cggcgaaagt 6061 aaaaaagagt tgggaattcg aattcgatta acgttaaaat attcagacag aaacttaacg 6121 cacaagaaca aaagagatca acaccaaaag cagctgctaa atcccaagaa aacagaaaac 6181 caaatacaac atgaacaatt tatatgctcg taagtatata gacaatttca ataactgata 6241 aaaatatata tacaagaaaa aaagcgaaat ttacatgcaa ttcaaataca ttttccataa 6301 ccgcatcaac taaacaacaa ttacaaacga attaaagtgg atgaaaacga ttcgaggaat 6361 gaatattata aattatggat gtgcgaacga aaacgccaca aaaaccaaaa attgtaagcc 6421 attttttaat cattgtcgca tttaagatat gataaacgag aacgaaatac aaaattcaaa 6481 aatttctcag ttctaaaaac acacgttcag aatcacactg acattcgctc aatacattga 6541 gttcattgca taacgaatac aaaaattgac atacatacaa cataaaaatg aagtaaacaa 6601 aacatttgat ggtaaacgaa cgtacagatg acatacaagt aattttaaat tgaataaaaa 6661 ctagtattaa atatgtacaa caaaaaa