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LOCUS XM_044396246 6448 bp mRNA linear INV 09-DEC-2024 transcript variant X3, mRNA. ACCESSION XM_044396246 VERSION XM_044396246.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044396246.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6448 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6448 /gene="OtopLa" /note="Otopetrin-like a; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108058416" CDS 561..3395 /gene="OtopLa" /codon_start=1 /product="proton channel OtopLc isoform X1" /protein_id="XP_044252181.1" /db_xref="GeneID:108058416" /translation="MQRCPYIHEMRERLLDQPRETLQLENMERANLLDNRQSASESNQ VGTVVKLQGDGYHTSPAHQRTPLVPHDLGEDFNLDFDDDFPIDARRPKNAKTSLFIVT SLVYAILLIVVCIAYVISDVTTHRLPVLYYETFFTYLYGVSILFLLYVFCFLLQESSC CNGGNGGSKPKPQPKEKKSKKAKNADPADSKDAKGSKDSGKAAKGAAYQEAPVDAEVA VTPKNVRKRKTTHSDLTHGSFFLRVGAIAFGLGAMIYIGLEFGSFFEIPFDSPCHHIL IGVNPLLQMIFTFMQMYFIFMNARTRPPFQLNIHRFKVIARFGLMHVVATNICVWIRT LVKESLLEITIYHQKNEPEAGASSIAHSIRQHALRHAGTVLRTHAGPNSEFEVLDGED ILPKDVYKSDNVLSKLVRNTVDGISKSLGMGGDLTSTSSTTSTTTRAPFTTPNYQWHS TTMARKLKKFITSATTAATTAAGGSGTTTTSSTTISPSTTTSTIDPSSSTTTTTTTFS PFSTTTATNNNLETSSGLQRLLSSSANPPSLAPVDGFGSAVTPTSVSGSGSFMDSFLS STLSPASSTEGSASIMNNLFGQQGPMENSFQTYSDLGHEEVTGLVSFENLESLDNIYP AALSSNIGTLNSTACGRIDIMGTIVYDSAPYLYPFIIEYSLIGAVVLYVMWKHIGRYP GRMNDEDLEHRLEVMLSRRAVAMAQQQRSGRVDCVGSSKGLFFGLLLLVGALICLILF FVLVRHQQFSLLAIYLADASHCILMAFAILAIIVGFIRVKNLKFRCEEQSNLNDILLR ISAFGLFTYSVFSIIAGSLKVLESEPSLLVTTTGGVAVFQVILQLLFIADVSRRRVHL PEHDRSKPGRQIVTFLLICNVAMFAIYTFEAQKVFANPVSRYVQLEFYGFVPWSIIQR ITLPLCIFHRFHSAVTLAEIWKTTYKARLE" misc_feature 1278..>1739 /gene="OtopLa" /note="Region: Otopetrin; pfam03189" /db_xref="CDD:460840" misc_feature <2424..3335 /gene="OtopLa" /note="Region: Otopetrin; pfam03189" /db_xref="CDD:460840" polyA_site 6448 /gene="OtopLa" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgaacttttg cgagtgatgg aagacaagtt gtctcttctc agaccgtgag agacaaaagt 61 gctgggaaat aactaaaaat taaatcagca aaactaccga ataacgaata aaaacagaaa 121 gtgcgtcgtc gtccattttg tgtgtgttgt gcgtgtgtgc gtgtgtccat gtccttttgt 181 atttcgtatt ttggcccaca acgcaggaca ataatagcct aaatcaaccc gaaacaaaac 241 cgaaataata aaacaaaaac gcgcgcaaaa ccacgacccc ctctccacgc caaaacatct 301 tgttcttctt ctcgagcgga agcaaaacaa aaacaacagg acaacgccaa aagaaagtag 361 aaaagagaag cgaaatagaa agaagcaaga ggaagcgacc ccaaaagcac acacatatga 421 tctgaacggc aggatataac cccaaaaaaa acgaccaatc tgcgcaacca aaagtcttaa 481 accttcaact gctgctgcaa accataggga agagcagagg agcagagaag ggtcggaaga 541 gagagagaga ggagcaagga atgcagcggt gtccctacat tcatgagatg cgcgaaagat 601 tactggacca gccacgggag acacttcaac tggagaacat ggagcgggcc aatctgctcg 661 acaaccgcca atcggcatcc gaatccaacc aggtcggcac tgtggtcaag ctgcagggcg 721 atggctatca cacgagtcct gcacaccagc gcactccact agtgcctcac gatctcggcg 781 aggacttcaa tttggatttc gacgatgact ttccgatcga cgcccgacga ccgaaaaatg 841 ccaagacatc gctgttcatc gtgaccagtc tggtgtacgc gatcctactg atcgtcgtct 901 gcattgcata cgtaatcagc gatgtaacca cccaccgact gccggttctc tactacgaga 961 cattcttcac atatctctac ggcgtcagca tactcttcct cctttacgtc ttctgtttcc 1021 tgctgcagga gagctcttgc tgcaatggcg gcaatggtgg cagcaaaccg aaaccccaac 1081 ccaaggagaa gaagtcgaag aaagccaaaa atgccgatcc ggccgattcg aaggatgcga 1141 agggctctaa ggactcgggc aaggcagcca agggcgccgc atatcaggaa gcacccgtgg 1201 atgccgaggt ggccgtcacc ccaaagaatg tgcgcaagcg caagacaacc catagtgacc 1261 tgacgcacgg tagctttttt ctgcgcgtag gagccattgc tttcggattg ggcgccatga 1321 tttatattgg cctggagttt ggatcgttct tcgaaatacc cttcgattcg ccatgccatc 1381 acattctgat cggcgtaaac ccactgctcc aaatgatatt caccttcatg cagatgtatt 1441 tcatattcat gaatgcccgg actaggccgc catttcagct gaacatccac cgcttcaagg 1501 tgatcgcccg ctttggcctg atgcacgtgg tggccaccaa catatgcgtg tggattcgca 1561 cgctggtcaa ggaatcgctg ctcgagatta cgatctatca ccagaagaac gaaccggagg 1621 cgggagcctc ctccattgcc cattcgatac ggcagcatgc cctgcgtcat gctggcactg 1681 tgctgagaac tcatgcggga cccaatagcg agttcgaggt tctcgacggc gaggacattc 1741 tgcccaagga tgtgtacaaa agcgacaatg tgctgtcgaa gctggttcgc aatacagtgg 1801 atggtatttc caagagtctg ggaatgggtg gtgatctaac cagcactagt agcaccacct 1861 cgacgacgac gagggctccg tttaccactc cgaactacca atggcacagc actactatgg 1921 cccgcaagtt gaagaagttt atcaccagcg ccaccacagc ggcgaccacg gcggcgggcg 1981 gcagtggcac caccaccacc agtagcacca ccatctcacc ttcgaccacc accagtacca 2041 ttgacccatc atcgagcacc accaccacca ccaccacctt cagtccattt agcaccacca 2101 ctgccacgaa taataatctc gagaccagca gcggcctgca gcgccttcta tcatccagcg 2161 ctaatccgcc gagcctggcg ccagtcgatg ggttcggttc cgctgttacg cctacttccg 2221 tttccggttc gggatccttt atggattcct tcctgtccag caccttgagc ccggcaagca 2281 gcaccgaagg ctcggccagc ataatgaaca acctgttcgg ccagcaggga cccatggaga 2341 atagcttcca aacgtattcg gatctgggcc acgaagaggt caccgggctg gttagcttcg 2401 agaatttgga gagcctggac aatatctacc cggcggccct gtcctccaat atcggcacac 2461 tcaactccac cgcctgcgga aggatcgata taatgggcac cattgtctac gattcggcgc 2521 cgtatctgta tccatttatt atcgaatact cgctgatcgg ggcggtggtt ttgtatgtca 2581 tgtggaagca tatcggtcgc tatcccggca ggatgaacga tgaggacttg gagcaccggc 2641 tggaggtgat gctatcgcgc agggcggtgg ccatggcgca gcagcagcga tccggacgcg 2701 ttgactgcgt cggctcgtcg aagggcctgt tctttgggct cctgctgctg gtcggagcgc 2761 tcatctgcct gatactcttc ttcgtcttgg tgcgccatca gcagttctcg ctgttggcca 2821 tttacctcgc cgacgccagc cactgcattc tgatggcctt tgccatactg gccattatag 2881 ttggatttat cagggtcaag aacctgaagt tccgctgcga ggagcagtcg aacctgaacg 2941 acatattgct gcgcatatcg gcctttggcc tgttcaccta ctcggtgttc agcatcatcg 3001 ccggcagcct gaaggtcctg gagagcgagc cgagcctgct ggtgacgacc accgggggcg 3061 tggccgtctt ccaggtgatc ctgcagctgc tcttcatcgc cgatgtgtcc cgccgccgcg 3121 tccacctgcc ggagcacgat cgcagcaagc cgggccgcca gatagtcacc ttccttctca 3181 tctgcaacgt ggccatgttc gccatctaca cattcgaagc tcaaaaagta ttcgccaatc 3241 ctgtaagtag atatgttcag ctggagttct acggctttgt gccctggtcg atcatccagc 3301 gcatcacact gcccctgtgc atattccatc gattccacag cgccgtgaca ctcgccgaga 3361 tctggaagac cacctacaag gcacgcctgg agtaagatgt ctatataggc cgatgtggga 3421 gttatgaaaa aatgcaccaa accaaaatgt agcgagccca gaacgcaaat agaaatcaag 3481 tgaagagtta gtttctaatt acgtattaaa aacatatatg cgtactacat ataatataca 3541 tattatacat taatgcagat atgattatta tttttttgtt tgacaaccaa agcaaagcga 3601 aacgaaatga gaaacgaaac gaacgaaccg atttgttgat tttgccctgc tttccttttt 3661 tactttgtta actcgtggag gacttaagaa cttaagaact aagtcatagc gtttacagtt 3721 tacccgaagg aaaaccacgg cacacgtttt taatctgagt tacgtattta attttagttt 3781 tagtttagtt taacacactg caatatcttg ttactaaatc gatgaattca aattaatatt 3841 aatttcttaa ttgtttaacc cttatccgct tcggcagaaa cagaaaccaa aaagaaatcg 3901 attaaaaaat tcacataaca aataagattg aaattactat aaaccaaaaa acaaaaaagg 3961 ttgtttactt ttcgcgtatt ttttcgcgac tgtgaaaagt caagaatccc gggaaaagcg 4021 aacatgaatg aacacgaact aaaacacaaa acagggacac aaaaagcaat gccatgaaga 4081 acgcggccac aggaaacgga aacgaaagga ctttcttaat aaatttgatc tgacttttcc 4141 gcaaaacaac caataaacag taacagccga aacaacaaca aactgtgatg aatttatttg 4201 atttactggt attatttaat tttatttccg ttttgttctc tcgacttgat ttaatcactt 4261 aacctctttt gttattttat tctcagcttc acacttcact cactgagtcg acgcaacttt 4321 tgtaagaatt tagaaacaat ggcgataaga caacttcatg gccaattgta aaaacaaatt 4381 ccccgaaaca ccataaaaga aaaacataaa atacgacaaa aaaaatcaag agaaaactaa 4441 gaaaattgtg gcatttaatg gccaaaaata caaaaaaaaa aaaaaacaaa caatttttaa 4501 tatacattat ataaaagttt ataaatgtcc attttttgat tattagtagt gatgttaaaa 4561 aaaaacataa ttaacgtaaa cataataata tatgtatgta tgttatagca aagaatcgga 4621 taaaccaaga cattcttaag ctacactcga agaaagaaat cagagaactt gtgaaccaaa 4681 cgaacaaaat ctttccaagt gaatccccgc atttatgaat gaacattttt agataaagcg 4741 aaatggagaa atcaagtgga gtgacaggaa gagaagggag aaaccattga caagcatcaa 4801 tttgtttaca gcaatgttaa aaaaaaaaaa cgaaacgaac attttgaaag atatatatgc 4861 cacgtatatc tataaatata tgtatactaa cccaccaaat tcaaagtatt tcaacgtttt 4921 atacaaggag acgatgcgca agacaagaga tcggggcagc taacgacctg tcccactcgg 4981 atcccgaatc ccgaacccaa gttcctctac ccctattaac ccgaaaatca aaaacctcat 5041 cccaattaca gctgcaatct aagtcagaaa gcatcagttt gccaaagacc aaagaagata 5101 aagacaaaga cgttaccgaa aggcgataaa tcgataaatt gcgaatccga ttataatctg 5161 taatcataat ccagtcttca agtctacata tatataatgc atgttaactg tagacgctgg 5221 ttcaagcagt tcaagaagaa tacgtataca atactcgtaa tccaatcaaa tgtaatgtgg 5281 tagcaaaagc ataggtaagc caagtcgaaa aatcgaacaa accattaaag tagctcagca 5341 cacacacact cagtcactca cacgatcgat cactcatgga tctgggtatt cagtattcag 5401 tatcgagtat tcagtattca gtattcggtg aatcatatat ccaaacgttt gcgaattaaa 5461 ttcagtttga aacttgtact tgcgtaggct cttagacatt ttacttgaat gcatacgctt 5521 cataagtcac atacatacat atatatatat atatttaact atacatatat atatataaat 5581 ataaatttaa aaaagaattg tttttttcct taacatttag ttaaacgtaa gattgaatca 5641 tattttacgc cgtacaaccg aacagaaaaa aagtgagcag aaagaaatat ttattaaatg 5701 tttcaactaa gttgtataat tataagtgag aatttacata atggaattat gtatctgtat 5761 ctaagccaga caaaaaaaaa acaaaaaaca ctgaaaacat ttttgggaaa gcggcgaaag 5821 taaaaaagag ttgggaattc gaattcgatt aacgttaaaa tattcagaca gaaacttaac 5881 gcacaagaac aaaagagatc aacaccaaaa gcagctgcta aatcccaaga aaacagaaaa 5941 ccaaatacaa catgaacaat ttatatgctc gtaagtatat agacaatttc aataactgat 6001 aaaaatatat atacaagaaa aaaagcgaaa tttacatgca attcaaatac attttccata 6061 accgcatcaa ctaaacaaca attacaaacg aattaaagtg gatgaaaacg attcgaggaa 6121 tgaatattat aaattatgga tgtgcgaacg aaaacgccac aaaaaccaaa aattgtaagc 6181 cattttttaa tcattgtcgc atttaagata tgataaacga gaacgaaata caaaattcaa 6241 aaatttctca gttctaaaaa cacacgttca gaatcacact gacattcgct caatacattg 6301 agttcattgc ataacgaata caaaaattga catacataca acataaaaat gaagtaaaca 6361 aaacatttga tggtaaacga acgtacagat gacatacaag taattttaaa ttgaataaaa 6421 actagtatta aatatgtaca acaaaaaa