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LOCUS XM_044396245 6466 bp mRNA linear INV 09-DEC-2024 transcript variant X2, mRNA. ACCESSION XM_044396245 VERSION XM_044396245.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044396245.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6466 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6466 /gene="OtopLa" /note="Otopetrin-like a; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108058416" CDS 579..3413 /gene="OtopLa" /codon_start=1 /product="proton channel OtopLc isoform X1" /protein_id="XP_044252180.1" /db_xref="GeneID:108058416" /translation="MQRCPYIHEMRERLLDQPRETLQLENMERANLLDNRQSASESNQ VGTVVKLQGDGYHTSPAHQRTPLVPHDLGEDFNLDFDDDFPIDARRPKNAKTSLFIVT SLVYAILLIVVCIAYVISDVTTHRLPVLYYETFFTYLYGVSILFLLYVFCFLLQESSC CNGGNGGSKPKPQPKEKKSKKAKNADPADSKDAKGSKDSGKAAKGAAYQEAPVDAEVA VTPKNVRKRKTTHSDLTHGSFFLRVGAIAFGLGAMIYIGLEFGSFFEIPFDSPCHHIL IGVNPLLQMIFTFMQMYFIFMNARTRPPFQLNIHRFKVIARFGLMHVVATNICVWIRT LVKESLLEITIYHQKNEPEAGASSIAHSIRQHALRHAGTVLRTHAGPNSEFEVLDGED ILPKDVYKSDNVLSKLVRNTVDGISKSLGMGGDLTSTSSTTSTTTRAPFTTPNYQWHS TTMARKLKKFITSATTAATTAAGGSGTTTTSSTTISPSTTTSTIDPSSSTTTTTTTFS PFSTTTATNNNLETSSGLQRLLSSSANPPSLAPVDGFGSAVTPTSVSGSGSFMDSFLS STLSPASSTEGSASIMNNLFGQQGPMENSFQTYSDLGHEEVTGLVSFENLESLDNIYP AALSSNIGTLNSTACGRIDIMGTIVYDSAPYLYPFIIEYSLIGAVVLYVMWKHIGRYP GRMNDEDLEHRLEVMLSRRAVAMAQQQRSGRVDCVGSSKGLFFGLLLLVGALICLILF FVLVRHQQFSLLAIYLADASHCILMAFAILAIIVGFIRVKNLKFRCEEQSNLNDILLR ISAFGLFTYSVFSIIAGSLKVLESEPSLLVTTTGGVAVFQVILQLLFIADVSRRRVHL PEHDRSKPGRQIVTFLLICNVAMFAIYTFEAQKVFANPVSRYVQLEFYGFVPWSIIQR ITLPLCIFHRFHSAVTLAEIWKTTYKARLE" misc_feature 1296..>1757 /gene="OtopLa" /note="Region: Otopetrin; pfam03189" /db_xref="CDD:460840" misc_feature <2442..3353 /gene="OtopLa" /note="Region: Otopetrin; pfam03189" /db_xref="CDD:460840" polyA_site 6466 /gene="OtopLa" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgaacttttg cgagtgatgg aagacaagtt gtctcttctc agaccgtgag agacaaaagt 61 gctgggaaat aactaaaaat taaatcagca aaactaccga ataacgaata aaaacagaaa 121 gtgcgtcgtc gtccattttg tgtgtgttgt gcgtgtgtgc gtgtgtccat gtccttttgt 181 atttcgtatt ttggcccaca acgcaggaca ataatagcct aaatcaaccc gaaacaaaac 241 cgaaataata aaacaaaaac gcgcgcaaaa ccacgacccc ctctccacgc caaaacatct 301 tgttcttctt ctcgagcgga agcaaaacaa aaacaacagg acaacgccaa aagaaagtag 361 aaaagagaag cgaaatagaa agaagcaaga ggaagcgacc ccaaaagcac acacatatga 421 tctgaacggc aggatataac cccaaaaaaa acgaccaatc tgcgcaacca aaagtcttaa 481 accttcaact gctgctgcaa accgtatgac tgatttatca aatagggaag agcagaggag 541 cagagaaggg tcggaagaga gagagagagg agcaaggaat gcagcggtgt ccctacattc 601 atgagatgcg cgaaagatta ctggaccagc cacgggagac acttcaactg gagaacatgg 661 agcgggccaa tctgctcgac aaccgccaat cggcatccga atccaaccag gtcggcactg 721 tggtcaagct gcagggcgat ggctatcaca cgagtcctgc acaccagcgc actccactag 781 tgcctcacga tctcggcgag gacttcaatt tggatttcga cgatgacttt ccgatcgacg 841 cccgacgacc gaaaaatgcc aagacatcgc tgttcatcgt gaccagtctg gtgtacgcga 901 tcctactgat cgtcgtctgc attgcatacg taatcagcga tgtaaccacc caccgactgc 961 cggttctcta ctacgagaca ttcttcacat atctctacgg cgtcagcata ctcttcctcc 1021 tttacgtctt ctgtttcctg ctgcaggaga gctcttgctg caatggcggc aatggtggca 1081 gcaaaccgaa accccaaccc aaggagaaga agtcgaagaa agccaaaaat gccgatccgg 1141 ccgattcgaa ggatgcgaag ggctctaagg actcgggcaa ggcagccaag ggcgccgcat 1201 atcaggaagc acccgtggat gccgaggtgg ccgtcacccc aaagaatgtg cgcaagcgca 1261 agacaaccca tagtgacctg acgcacggta gcttttttct gcgcgtagga gccattgctt 1321 tcggattggg cgccatgatt tatattggcc tggagtttgg atcgttcttc gaaataccct 1381 tcgattcgcc atgccatcac attctgatcg gcgtaaaccc actgctccaa atgatattca 1441 ccttcatgca gatgtatttc atattcatga atgcccggac taggccgcca tttcagctga 1501 acatccaccg cttcaaggtg atcgcccgct ttggcctgat gcacgtggtg gccaccaaca 1561 tatgcgtgtg gattcgcacg ctggtcaagg aatcgctgct cgagattacg atctatcacc 1621 agaagaacga accggaggcg ggagcctcct ccattgccca ttcgatacgg cagcatgccc 1681 tgcgtcatgc tggcactgtg ctgagaactc atgcgggacc caatagcgag ttcgaggttc 1741 tcgacggcga ggacattctg cccaaggatg tgtacaaaag cgacaatgtg ctgtcgaagc 1801 tggttcgcaa tacagtggat ggtatttcca agagtctggg aatgggtggt gatctaacca 1861 gcactagtag caccacctcg acgacgacga gggctccgtt taccactccg aactaccaat 1921 ggcacagcac tactatggcc cgcaagttga agaagtttat caccagcgcc accacagcgg 1981 cgaccacggc ggcgggcggc agtggcacca ccaccaccag tagcaccacc atctcacctt 2041 cgaccaccac cagtaccatt gacccatcat cgagcaccac caccaccacc accaccttca 2101 gtccatttag caccaccact gccacgaata ataatctcga gaccagcagc ggcctgcagc 2161 gccttctatc atccagcgct aatccgccga gcctggcgcc agtcgatggg ttcggttccg 2221 ctgttacgcc tacttccgtt tccggttcgg gatcctttat ggattccttc ctgtccagca 2281 ccttgagccc ggcaagcagc accgaaggct cggccagcat aatgaacaac ctgttcggcc 2341 agcagggacc catggagaat agcttccaaa cgtattcgga tctgggccac gaagaggtca 2401 ccgggctggt tagcttcgag aatttggaga gcctggacaa tatctacccg gcggccctgt 2461 cctccaatat cggcacactc aactccaccg cctgcggaag gatcgatata atgggcacca 2521 ttgtctacga ttcggcgccg tatctgtatc catttattat cgaatactcg ctgatcgggg 2581 cggtggtttt gtatgtcatg tggaagcata tcggtcgcta tcccggcagg atgaacgatg 2641 aggacttgga gcaccggctg gaggtgatgc tatcgcgcag ggcggtggcc atggcgcagc 2701 agcagcgatc cggacgcgtt gactgcgtcg gctcgtcgaa gggcctgttc tttgggctcc 2761 tgctgctggt cggagcgctc atctgcctga tactcttctt cgtcttggtg cgccatcagc 2821 agttctcgct gttggccatt tacctcgccg acgccagcca ctgcattctg atggcctttg 2881 ccatactggc cattatagtt ggatttatca gggtcaagaa cctgaagttc cgctgcgagg 2941 agcagtcgaa cctgaacgac atattgctgc gcatatcggc ctttggcctg ttcacctact 3001 cggtgttcag catcatcgcc ggcagcctga aggtcctgga gagcgagccg agcctgctgg 3061 tgacgaccac cgggggcgtg gccgtcttcc aggtgatcct gcagctgctc ttcatcgccg 3121 atgtgtcccg ccgccgcgtc cacctgccgg agcacgatcg cagcaagccg ggccgccaga 3181 tagtcacctt ccttctcatc tgcaacgtgg ccatgttcgc catctacaca ttcgaagctc 3241 aaaaagtatt cgccaatcct gtaagtagat atgttcagct ggagttctac ggctttgtgc 3301 cctggtcgat catccagcgc atcacactgc ccctgtgcat attccatcga ttccacagcg 3361 ccgtgacact cgccgagatc tggaagacca cctacaaggc acgcctggag taagatgtct 3421 atataggccg atgtgggagt tatgaaaaaa tgcaccaaac caaaatgtag cgagcccaga 3481 acgcaaatag aaatcaagtg aagagttagt ttctaattac gtattaaaaa catatatgcg 3541 tactacatat aatatacata ttatacatta atgcagatat gattattatt tttttgtttg 3601 acaaccaaag caaagcgaaa cgaaatgaga aacgaaacga acgaaccgat ttgttgattt 3661 tgccctgctt tcctttttta ctttgttaac tcgtggagga cttaagaact taagaactaa 3721 gtcatagcgt ttacagttta cccgaaggaa aaccacggca cacgttttta atctgagtta 3781 cgtatttaat tttagtttta gtttagttta acacactgca atatcttgtt actaaatcga 3841 tgaattcaaa ttaatattaa tttcttaatt gtttaaccct tatccgcttc ggcagaaaca 3901 gaaaccaaaa agaaatcgat taaaaaattc acataacaaa taagattgaa attactataa 3961 accaaaaaac aaaaaaggtt gtttactttt cgcgtatttt ttcgcgactg tgaaaagtca 4021 agaatcccgg gaaaagcgaa catgaatgaa cacgaactaa aacacaaaac agggacacaa 4081 aaagcaatgc catgaagaac gcggccacag gaaacggaaa cgaaaggact ttcttaataa 4141 atttgatctg acttttccgc aaaacaacca ataaacagta acagccgaaa caacaacaaa 4201 ctgtgatgaa tttatttgat ttactggtat tatttaattt tatttccgtt ttgttctctc 4261 gacttgattt aatcacttaa cctcttttgt tattttattc tcagcttcac acttcactca 4321 ctgagtcgac gcaacttttg taagaattta gaaacaatgg cgataagaca acttcatggc 4381 caattgtaaa aacaaattcc ccgaaacacc ataaaagaaa aacataaaat acgacaaaaa 4441 aaatcaagag aaaactaaga aaattgtggc atttaatggc caaaaataca aaaaaaaaaa 4501 aaaacaaaca atttttaata tacattatat aaaagtttat aaatgtccat tttttgatta 4561 ttagtagtga tgttaaaaaa aaacataatt aacgtaaaca taataatata tgtatgtatg 4621 ttatagcaaa gaatcggata aaccaagaca ttcttaagct acactcgaag aaagaaatca 4681 gagaacttgt gaaccaaacg aacaaaatct ttccaagtga atccccgcat ttatgaatga 4741 acatttttag ataaagcgaa atggagaaat caagtggagt gacaggaaga gaagggagaa 4801 accattgaca agcatcaatt tgtttacagc aatgttaaaa aaaaaaaacg aaacgaacat 4861 tttgaaagat atatatgcca cgtatatcta taaatatatg tatactaacc caccaaattc 4921 aaagtatttc aacgttttat acaaggagac gatgcgcaag acaagagatc ggggcagcta 4981 acgacctgtc ccactcggat cccgaatccc gaacccaagt tcctctaccc ctattaaccc 5041 gaaaatcaaa aacctcatcc caattacagc tgcaatctaa gtcagaaagc atcagtttgc 5101 caaagaccaa agaagataaa gacaaagacg ttaccgaaag gcgataaatc gataaattgc 5161 gaatccgatt ataatctgta atcataatcc agtcttcaag tctacatata tataatgcat 5221 gttaactgta gacgctggtt caagcagttc aagaagaata cgtatacaat actcgtaatc 5281 caatcaaatg taatgtggta gcaaaagcat aggtaagcca agtcgaaaaa tcgaacaaac 5341 cattaaagta gctcagcaca cacacactca gtcactcaca cgatcgatca ctcatggatc 5401 tgggtattca gtattcagta tcgagtattc agtattcagt attcggtgaa tcatatatcc 5461 aaacgtttgc gaattaaatt cagtttgaaa cttgtacttg cgtaggctct tagacatttt 5521 acttgaatgc atacgcttca taagtcacat acatacatat atatatatat atttaactat 5581 acatatatat atataaatat aaatttaaaa aagaattgtt tttttcctta acatttagtt 5641 aaacgtaaga ttgaatcata ttttacgccg tacaaccgaa cagaaaaaaa gtgagcagaa 5701 agaaatattt attaaatgtt tcaactaagt tgtataatta taagtgagaa tttacataat 5761 ggaattatgt atctgtatct aagccagaca aaaaaaaaac aaaaaacact gaaaacattt 5821 ttgggaaagc ggcgaaagta aaaaagagtt gggaattcga attcgattaa cgttaaaata 5881 ttcagacaga aacttaacgc acaagaacaa aagagatcaa caccaaaagc agctgctaaa 5941 tcccaagaaa acagaaaacc aaatacaaca tgaacaattt atatgctcgt aagtatatag 6001 acaatttcaa taactgataa aaatatatat acaagaaaaa aagcgaaatt tacatgcaat 6061 tcaaatacat tttccataac cgcatcaact aaacaacaat tacaaacgaa ttaaagtgga 6121 tgaaaacgat tcgaggaatg aatattataa attatggatg tgcgaacgaa aacgccacaa 6181 aaaccaaaaa ttgtaagcca ttttttaatc attgtcgcat ttaagatatg ataaacgaga 6241 acgaaataca aaattcaaaa atttctcagt tctaaaaaca cacgttcaga atcacactga 6301 cattcgctca atacattgag ttcattgcat aacgaataca aaaattgaca tacatacaac 6361 ataaaaatga agtaaacaaa acatttgatg gtaaacgaac gtacagatga catacaagta 6421 attttaaatt gaataaaaac tagtattaaa tatgtacaac aaaaaa