Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_044396244 6699 bp mRNA linear INV 09-DEC-2024 transcript variant X1, mRNA. ACCESSION XM_044396244 VERSION XM_044396244.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044396244.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6699 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6699 /gene="OtopLa" /note="Otopetrin-like a; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108058416" CDS 812..3646 /gene="OtopLa" /codon_start=1 /product="proton channel OtopLc isoform X1" /protein_id="XP_044252179.1" /db_xref="GeneID:108058416" /translation="MQRCPYIHEMRERLLDQPRETLQLENMERANLLDNRQSASESNQ VGTVVKLQGDGYHTSPAHQRTPLVPHDLGEDFNLDFDDDFPIDARRPKNAKTSLFIVT SLVYAILLIVVCIAYVISDVTTHRLPVLYYETFFTYLYGVSILFLLYVFCFLLQESSC CNGGNGGSKPKPQPKEKKSKKAKNADPADSKDAKGSKDSGKAAKGAAYQEAPVDAEVA VTPKNVRKRKTTHSDLTHGSFFLRVGAIAFGLGAMIYIGLEFGSFFEIPFDSPCHHIL IGVNPLLQMIFTFMQMYFIFMNARTRPPFQLNIHRFKVIARFGLMHVVATNICVWIRT LVKESLLEITIYHQKNEPEAGASSIAHSIRQHALRHAGTVLRTHAGPNSEFEVLDGED ILPKDVYKSDNVLSKLVRNTVDGISKSLGMGGDLTSTSSTTSTTTRAPFTTPNYQWHS TTMARKLKKFITSATTAATTAAGGSGTTTTSSTTISPSTTTSTIDPSSSTTTTTTTFS PFSTTTATNNNLETSSGLQRLLSSSANPPSLAPVDGFGSAVTPTSVSGSGSFMDSFLS STLSPASSTEGSASIMNNLFGQQGPMENSFQTYSDLGHEEVTGLVSFENLESLDNIYP AALSSNIGTLNSTACGRIDIMGTIVYDSAPYLYPFIIEYSLIGAVVLYVMWKHIGRYP GRMNDEDLEHRLEVMLSRRAVAMAQQQRSGRVDCVGSSKGLFFGLLLLVGALICLILF FVLVRHQQFSLLAIYLADASHCILMAFAILAIIVGFIRVKNLKFRCEEQSNLNDILLR ISAFGLFTYSVFSIIAGSLKVLESEPSLLVTTTGGVAVFQVILQLLFIADVSRRRVHL PEHDRSKPGRQIVTFLLICNVAMFAIYTFEAQKVFANPVSRYVQLEFYGFVPWSIIQR ITLPLCIFHRFHSAVTLAEIWKTTYKARLE" misc_feature 1529..>1990 /gene="OtopLa" /note="Region: Otopetrin; pfam03189" /db_xref="CDD:460840" misc_feature <2675..3586 /gene="OtopLa" /note="Region: Otopetrin; pfam03189" /db_xref="CDD:460840" polyA_site 6699 /gene="OtopLa" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgaacttttg cgagtgatgg aagacaagtt gtctcttctc agaccgtgag agacaaaagt 61 gctgggaaat aactaaaaat taaatcagca aaactaccga ataacgaata aaaacagaaa 121 gtgcgtcgtc gtccattttg tgtgtgttgt gcgtgtgtgc gtgtgtccat gtccttttgt 181 atttcgtatt ttggcccaca acgcaggaca ataatagcct aaatcaaccc gaaacaaaac 241 cgaaataata aaacaaaaac gcgcgcaaaa ccacgacccc ctctccacgc caaaacatct 301 tgttcttctt ctcgagcgga agcaaaacaa aaacaacagg acaacgccaa aagaaagtag 361 aaaagagaag cgaaatagaa agaagcaaga ggaagcgacc ccaaaagcac acacatatga 421 tctgaacggc aggatataac cccaaaaaaa acgaccaatc tgcgcaacca aaagtcttaa 481 accttcaact gctgctgcaa accgtatgac tgatttatca agttgagcaa accgtagcga 541 ttacctccct aagtacttta tactagctta caagcataaa catagtatat aaacccgcat 601 ttacggccgg atatatatta cgaatggcaa ggcaatagat ccaaatatat gtattggatt 661 gattatatcg taaaaagcta gaactgctgc attttgaaac tcccgtagat agtgtctaca 721 ctttagcata tatacatata tatttatctg atagataggg aagagcagag gagcagagaa 781 gggtcggaag agagagagag aggagcaagg aatgcagcgg tgtccctaca ttcatgagat 841 gcgcgaaaga ttactggacc agccacggga gacacttcaa ctggagaaca tggagcgggc 901 caatctgctc gacaaccgcc aatcggcatc cgaatccaac caggtcggca ctgtggtcaa 961 gctgcagggc gatggctatc acacgagtcc tgcacaccag cgcactccac tagtgcctca 1021 cgatctcggc gaggacttca atttggattt cgacgatgac tttccgatcg acgcccgacg 1081 accgaaaaat gccaagacat cgctgttcat cgtgaccagt ctggtgtacg cgatcctact 1141 gatcgtcgtc tgcattgcat acgtaatcag cgatgtaacc acccaccgac tgccggttct 1201 ctactacgag acattcttca catatctcta cggcgtcagc atactcttcc tcctttacgt 1261 cttctgtttc ctgctgcagg agagctcttg ctgcaatggc ggcaatggtg gcagcaaacc 1321 gaaaccccaa cccaaggaga agaagtcgaa gaaagccaaa aatgccgatc cggccgattc 1381 gaaggatgcg aagggctcta aggactcggg caaggcagcc aagggcgccg catatcagga 1441 agcacccgtg gatgccgagg tggccgtcac cccaaagaat gtgcgcaagc gcaagacaac 1501 ccatagtgac ctgacgcacg gtagcttttt tctgcgcgta ggagccattg ctttcggatt 1561 gggcgccatg atttatattg gcctggagtt tggatcgttc ttcgaaatac ccttcgattc 1621 gccatgccat cacattctga tcggcgtaaa cccactgctc caaatgatat tcaccttcat 1681 gcagatgtat ttcatattca tgaatgcccg gactaggccg ccatttcagc tgaacatcca 1741 ccgcttcaag gtgatcgccc gctttggcct gatgcacgtg gtggccacca acatatgcgt 1801 gtggattcgc acgctggtca aggaatcgct gctcgagatt acgatctatc accagaagaa 1861 cgaaccggag gcgggagcct cctccattgc ccattcgata cggcagcatg ccctgcgtca 1921 tgctggcact gtgctgagaa ctcatgcggg acccaatagc gagttcgagg ttctcgacgg 1981 cgaggacatt ctgcccaagg atgtgtacaa aagcgacaat gtgctgtcga agctggttcg 2041 caatacagtg gatggtattt ccaagagtct gggaatgggt ggtgatctaa ccagcactag 2101 tagcaccacc tcgacgacga cgagggctcc gtttaccact ccgaactacc aatggcacag 2161 cactactatg gcccgcaagt tgaagaagtt tatcaccagc gccaccacag cggcgaccac 2221 ggcggcgggc ggcagtggca ccaccaccac cagtagcacc accatctcac cttcgaccac 2281 caccagtacc attgacccat catcgagcac caccaccacc accaccacct tcagtccatt 2341 tagcaccacc actgccacga ataataatct cgagaccagc agcggcctgc agcgccttct 2401 atcatccagc gctaatccgc cgagcctggc gccagtcgat gggttcggtt ccgctgttac 2461 gcctacttcc gtttccggtt cgggatcctt tatggattcc ttcctgtcca gcaccttgag 2521 cccggcaagc agcaccgaag gctcggccag cataatgaac aacctgttcg gccagcaggg 2581 acccatggag aatagcttcc aaacgtattc ggatctgggc cacgaagagg tcaccgggct 2641 ggttagcttc gagaatttgg agagcctgga caatatctac ccggcggccc tgtcctccaa 2701 tatcggcaca ctcaactcca ccgcctgcgg aaggatcgat ataatgggca ccattgtcta 2761 cgattcggcg ccgtatctgt atccatttat tatcgaatac tcgctgatcg gggcggtggt 2821 tttgtatgtc atgtggaagc atatcggtcg ctatcccggc aggatgaacg atgaggactt 2881 ggagcaccgg ctggaggtga tgctatcgcg cagggcggtg gccatggcgc agcagcagcg 2941 atccggacgc gttgactgcg tcggctcgtc gaagggcctg ttctttgggc tcctgctgct 3001 ggtcggagcg ctcatctgcc tgatactctt cttcgtcttg gtgcgccatc agcagttctc 3061 gctgttggcc atttacctcg ccgacgccag ccactgcatt ctgatggcct ttgccatact 3121 ggccattata gttggattta tcagggtcaa gaacctgaag ttccgctgcg aggagcagtc 3181 gaacctgaac gacatattgc tgcgcatatc ggcctttggc ctgttcacct actcggtgtt 3241 cagcatcatc gccggcagcc tgaaggtcct ggagagcgag ccgagcctgc tggtgacgac 3301 caccgggggc gtggccgtct tccaggtgat cctgcagctg ctcttcatcg ccgatgtgtc 3361 ccgccgccgc gtccacctgc cggagcacga tcgcagcaag ccgggccgcc agatagtcac 3421 cttccttctc atctgcaacg tggccatgtt cgccatctac acattcgaag ctcaaaaagt 3481 attcgccaat cctgtaagta gatatgttca gctggagttc tacggctttg tgccctggtc 3541 gatcatccag cgcatcacac tgcccctgtg catattccat cgattccaca gcgccgtgac 3601 actcgccgag atctggaaga ccacctacaa ggcacgcctg gagtaagatg tctatatagg 3661 ccgatgtggg agttatgaaa aaatgcacca aaccaaaatg tagcgagccc agaacgcaaa 3721 tagaaatcaa gtgaagagtt agtttctaat tacgtattaa aaacatatat gcgtactaca 3781 tataatatac atattataca ttaatgcaga tatgattatt atttttttgt ttgacaacca 3841 aagcaaagcg aaacgaaatg agaaacgaaa cgaacgaacc gatttgttga ttttgccctg 3901 ctttcctttt ttactttgtt aactcgtgga ggacttaaga acttaagaac taagtcatag 3961 cgtttacagt ttacccgaag gaaaaccacg gcacacgttt ttaatctgag ttacgtattt 4021 aattttagtt ttagtttagt ttaacacact gcaatatctt gttactaaat cgatgaattc 4081 aaattaatat taatttctta attgtttaac ccttatccgc ttcggcagaa acagaaacca 4141 aaaagaaatc gattaaaaaa ttcacataac aaataagatt gaaattacta taaaccaaaa 4201 aacaaaaaag gttgtttact tttcgcgtat tttttcgcga ctgtgaaaag tcaagaatcc 4261 cgggaaaagc gaacatgaat gaacacgaac taaaacacaa aacagggaca caaaaagcaa 4321 tgccatgaag aacgcggcca caggaaacgg aaacgaaagg actttcttaa taaatttgat 4381 ctgacttttc cgcaaaacaa ccaataaaca gtaacagccg aaacaacaac aaactgtgat 4441 gaatttattt gatttactgg tattatttaa ttttatttcc gttttgttct ctcgacttga 4501 tttaatcact taacctcttt tgttatttta ttctcagctt cacacttcac tcactgagtc 4561 gacgcaactt ttgtaagaat ttagaaacaa tggcgataag acaacttcat ggccaattgt 4621 aaaaacaaat tccccgaaac accataaaag aaaaacataa aatacgacaa aaaaaatcaa 4681 gagaaaacta agaaaattgt ggcatttaat ggccaaaaat acaaaaaaaa aaaaaaacaa 4741 acaattttta atatacatta tataaaagtt tataaatgtc cattttttga ttattagtag 4801 tgatgttaaa aaaaaacata attaacgtaa acataataat atatgtatgt atgttatagc 4861 aaagaatcgg ataaaccaag acattcttaa gctacactcg aagaaagaaa tcagagaact 4921 tgtgaaccaa acgaacaaaa tctttccaag tgaatccccg catttatgaa tgaacatttt 4981 tagataaagc gaaatggaga aatcaagtgg agtgacagga agagaaggga gaaaccattg 5041 acaagcatca atttgtttac agcaatgtta aaaaaaaaaa acgaaacgaa cattttgaaa 5101 gatatatatg ccacgtatat ctataaatat atgtatacta acccaccaaa ttcaaagtat 5161 ttcaacgttt tatacaagga gacgatgcgc aagacaagag atcggggcag ctaacgacct 5221 gtcccactcg gatcccgaat cccgaaccca agttcctcta cccctattaa cccgaaaatc 5281 aaaaacctca tcccaattac agctgcaatc taagtcagaa agcatcagtt tgccaaagac 5341 caaagaagat aaagacaaag acgttaccga aaggcgataa atcgataaat tgcgaatccg 5401 attataatct gtaatcataa tccagtcttc aagtctacat atatataatg catgttaact 5461 gtagacgctg gttcaagcag ttcaagaaga atacgtatac aatactcgta atccaatcaa 5521 atgtaatgtg gtagcaaaag cataggtaag ccaagtcgaa aaatcgaaca aaccattaaa 5581 gtagctcagc acacacacac tcagtcactc acacgatcga tcactcatgg atctgggtat 5641 tcagtattca gtatcgagta ttcagtattc agtattcggt gaatcatata tccaaacgtt 5701 tgcgaattaa attcagtttg aaacttgtac ttgcgtaggc tcttagacat tttacttgaa 5761 tgcatacgct tcataagtca catacataca tatatatata tatatttaac tatacatata 5821 tatatataaa tataaattta aaaaagaatt gtttttttcc ttaacattta gttaaacgta 5881 agattgaatc atattttacg ccgtacaacc gaacagaaaa aaagtgagca gaaagaaata 5941 tttattaaat gtttcaacta agttgtataa ttataagtga gaatttacat aatggaatta 6001 tgtatctgta tctaagccag acaaaaaaaa aacaaaaaac actgaaaaca tttttgggaa 6061 agcggcgaaa gtaaaaaaga gttgggaatt cgaattcgat taacgttaaa atattcagac 6121 agaaacttaa cgcacaagaa caaaagagat caacaccaaa agcagctgct aaatcccaag 6181 aaaacagaaa accaaataca acatgaacaa tttatatgct cgtaagtata tagacaattt 6241 caataactga taaaaatata tatacaagaa aaaaagcgaa atttacatgc aattcaaata 6301 cattttccat aaccgcatca actaaacaac aattacaaac gaattaaagt ggatgaaaac 6361 gattcgagga atgaatatta taaattatgg atgtgcgaac gaaaacgcca caaaaaccaa 6421 aaattgtaag ccatttttta atcattgtcg catttaagat atgataaacg agaacgaaat 6481 acaaaattca aaaatttctc agttctaaaa acacacgttc agaatcacac tgacattcgc 6541 tcaatacatt gagttcattg cataacgaat acaaaaattg acatacatac aacataaaaa 6601 tgaagtaaac aaaacatttg atggtaaacg aacgtacaga tgacatacaa gtaattttaa 6661 attgaataaa aactagtatt aaatatgtac aacaaaaaa