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LOCUS XM_044396224 8631 bp mRNA linear INV 09-DEC-2024 paralytic (para), transcript variant X32, mRNA. ACCESSION XM_044396224 VERSION XM_044396224.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044396224.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8631 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8631 /gene="para" /note="sodium voltage-gated channel paralytic; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins" /db_xref="GeneID:108059094" CDS 1397..7792 /gene="para" /codon_start=1 /product="sodium channel protein para isoform X32" /protein_id="XP_044252159.1" /db_xref="GeneID:108059094" /translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK RAEGEIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPLEDIDPFYSNVLT FVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIM PTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMG IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALM GLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYHNRNSSNWYSEDEGISFPLCGNISG AGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWEDLYQLVLRAAGPW HMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAAAAKAA KLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGEKGNDDNNKEKMS IRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGSPFNIRRGSRSSHKYTI RNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLG SRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNTRNQSVGATNGGTTC LDTNHKLEHRDYEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKDVMVLNDIIEQAA GRHSRASDRGEDDDEDGPTFKDKALEVILKGIDVFCVWDCCWVWLKLQEWISLIVFDP FVELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYFFTATFAIEATMKLCAMSPKY YFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMG RTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHKDRFPDGDLPRWNFTDFMHSFMI VFRVLCGEWIESMWDCMYVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSSLSA PTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSEHGDNELELG HDEILADGLIKKGIKEQTQLEVAIGDGMEFTIHGDMKNNKPKKSKYLNNATMIGNSIN HQDNRLEHELNHRGLSLQDDDTASINSYGSHKNRPFKDESHKGSAETMEGEEKRDASK EDLGLDEELDEEGECEEGPLDGDIIIHAHDEDILDEYPADCCPDSYYKKFPILAGDDD SPFWQGWGNLRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYM DRIFTVIFFLEMLIKWLALGFKVYFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFK TMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAG KYFKCEDMNGTKLSHEIIPNRNACESENYTWVNSAMNFDHVGNAYLCLFQVATFKGWI QIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKA GGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDIIIMLF IGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFIEPWNLFD VVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMS LPALFNICLLLFLVMFIFAIFGMSFFMHVKEKSGINDVYNFKTFGQSMILLFQMSTSA GWDGVLDAIINEEACDPPDNDKGYPGNCGSATVGITFLLSYLVISFLIVINMYIAVIL ENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKP NKYKIISMDIPICRGDLMYCVDILDALTKDFFARKGNPIEETGEIGEIAARPDTEGYE PVSSTLWRQREEYCARLIQHAWRKHKARGEGGGGGGGSFEPDPDQVDGDGGGDPDAGE PANDEPADGMAEAPAGGGGGGGGGDGSVNGGGTGTGTGDGAADAADESNVNSPGEDAA SAAAGAATGATAGSPGAGSAGRQTAVLVESDGFVTKNGHKVVIHSRSPSITSRTADV" misc_feature 1814..2668 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 3023..3580 /gene="para" /note="Cytoplasmic domain of voltage-gated Na+ ion channel; Region: Na_trans_cytopl; pfam11933" /db_xref="CDD:463401" misc_feature 3785..4420 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 4496..5230 /gene="para" /note="Sodium ion transport-associated; Region: Na_trans_assoc; pfam06512" /db_xref="CDD:461936" misc_feature 5240..6055 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 6023..6181 /gene="para" /note="Inactivation gate of the voltage-gated sodium channel alpha subunits; Region: Na_channel_gate; cd13433" /db_xref="CDD:240441" misc_feature 6068..6079 /gene="para" /note="putative hydrophobic latch; other site" /db_xref="CDD:240441" misc_feature 6203..6955 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 6986..7129 /gene="para" /note="Voltage-dependent L-type calcium channel, IQ-associated; Region: GPHH; pfam16905" /db_xref="CDD:465306" ORIGIN 1 acagtttcag taaaccacgg agacgaacgg attacgggta acgaatcagc agcaacagtg 61 gcagcagcca tcagccagca gccagagaac aaaaaatatc aaagaaaaaa aaacagcact 121 taccaaaaaa aaaggaaata aaaatagtag tcaaaggagg accaaataaa aaaaacacaa 181 aaaactgaaa gagtaaaacc gaatataaaa acggcttaaa ggctaaaatc tcgagcactg 241 agtcctgtta aaaatatgaa ataaaaaagt tcacacactt gccgagccaa ccatatatat 301 atatatcata ctatatatat ataccatcat acatatatat atatccgata tataagtgcc 361 ttgagcagtg cgcaggcagt ccaaagtcca aagaaagttt tacataagtt ctccctcctc 421 aatcaggcaa cgtttttttt ctatagtttt ttttccgtga gtgtgaccca aaaacaaaaa 481 ataatcaaag agaaggaaag gcagcagcag caagaagaag cacaagcaga ataagaagaa 541 gaagaaaacg gaggagaaga agaaggagaa taagaagaag cagccagcca gccatcagga 601 aaacacaaaa gtcaaaaaac aaactatata gagctgagct ggccccaaaa aaaaagaata 661 tataaaaact ctgggaacaa aacgcaacgt ttgatgaaaa tttttggcaa ctcgtcgcgt 721 cgtcttggtt gttgttaacc acatcctgct aacgccaaag tccgaaaata aaattcaacc 781 caaataccca aaaataacac agatcaaaca aacaaagcaa aaaaaaagca aacaaaataa 841 caaaaaaaaa ccaaaaaaaa aaacaaacaa aaaattcatc ttctacttgt tctaccgctt 901 caactttatt cgtcttcgtc tccgtaataa atatataaaa agtatataca tatatatata 961 tatatatatg catatgtgtg tgagtgcgtc gcgtgtgtgt tggtgcctgt aaatgtgtga 1021 gccacaacaa caacaacagc agcagcagcc agagccagag caacaaccac agcagcagca 1081 acaacaacaa caacaacagt agttaacagc agcaacaatt cttagcagca ataacaatac 1141 aagcaagcac caccacaaca acaagagcag caacaacacc aaaaacagcc acaatagcaa 1201 tcacaataac aacatcaaag gatagagcga gcagccaagc acaacatcga ttgacatcga 1261 ttaacgcatc gtgctaagcg gcgggcgcta atcgaacatg gcgcctcgga tatagttgta 1321 gctttaatgt agcaggcgac atccatgtgc ctcatgcctt ggaaatctaa ggctctcatc 1381 gttggccgca tagacaatga cagaagattc cgactcgata tctgaggaag aacgcagttt 1441 gttccgtccc tttacccgcg aatcattggt gcaaatcgaa caacgcattg ccgctgaaca 1501 tgaaaagcag aaggagctgg aaagaaagag agccgaggga gagatccgat atgatgacga 1561 ggacgaggat gaaggtccac aaccggatcc tacacttgaa cagggtgtgc caatacctgt 1621 tcgattgcag ggcagcttcc cgccggaatt ggcctccact cctctcgagg atatcgatcc 1681 cttctacagc aatgtactga cattcgtagt tgtaagcaaa ggaaaagata tttttcgctt 1741 ttctgcatca aaagcaatgt ggatgctcga tccattcaat ccgatacgtc gtgtggccat 1801 ttacattcta gtgcatccat tattttccct attcatcatc accacaattc tcgtcaactg 1861 catcctgatg ataatgccga caacgcccac ggttgagtcc actgaggtga tattcaccgg 1921 aatctacaca tttgaatcag ctgttaaagt gatggcacga ggtttcattt tatgcccgtt 1981 tacgtatctt agagatgcat ggaattggct ggacttcgta gtaatagctt tagcttatgt 2041 gaccatgggt atagatttag gtaatctagc agccttgcga acgtttaggg tgctgcgagc 2101 gcttaaaacc gtagccattg tgccaggctt gaagaccatc gtcggcgccg tcatcgaatc 2161 ggtgaagaat ctgcgcgatg tgataatcct caccatgttc tccctgtcgg tcttcgcgct 2221 gatgggcctg cagatctaca tgggcgtgct cacgcagaag tgcatcaaga agttcccgct 2281 ggacggctcc tggggcaatc tgaccgacga gaactgggac tatcacaatc gcaacagctc 2341 caattggtac tcggaggacg agggcatctc atttccgctg tgcggcaata tatccggcgc 2401 ggggcaatgc gacgatgact acgtgtgtct gcaggggttt gggccgaatc cgaactacgg 2461 ctacaccagc ttcgattcat tcggctgggc cttcctgtcc gccttccggc tgatgacaca 2521 ggacttctgg gaggacctct accagctggt gttgcgcgcc gccggaccat ggcacatgct 2581 gttctttata gtcatcatct tcctaggttc attctatctt gtgaatttga ttttggccat 2641 tgttgccatg tcgtatgacg aattgcaaaa gaaggccgaa gaagaagagg ctgccgaaga 2701 ggaggcgata cgtgaagcgg aggaggctgc cgccgccaaa gctgccaagc tggaggagcg 2761 ggccaatgcg caggctcagg cagcagcgga tgcggctgcc gccgaagagg ctgcactgca 2821 tccggagatg gccaagagtc cgacgtattc gtgcatcagc tatgagcttt tcgttggcgg 2881 cgagaagggc aacgatgaca acaacaagga gaagatgtcc attcgcagcg tcgaggtgga 2941 gtcggagtcg gtgagcgtta tacaaagaca accagcacct accacagcac accaagctac 3001 caaagttcgt aaagtgagca cgacatcctt atccttacct ggttcaccgt ttaacatacg 3061 caggggatca cgtagttctc acaagtacac gatacggaac ggacgtggcc gctttggtat 3121 acccggtagc gatcgcaagc cgttggtatt gtcaacatat caggatgccc agcagcactt 3181 gccctatgcc gacgactcga atgccgtcac cccgatgtcc gaggagaacg gggccatcat 3241 agtgcccgtg tactatggca acctaggctc tcggcactca tcgtatacct cgcatcagtc 3301 ccgaatatcg tatacctcac atggcgatct actcggcggc atggccgtca tgggcgtcag 3361 cacaatgacc aaggagagca aattgcgcaa ccgcaacaca cgcaatcaat cagtgggcgc 3421 caccaatggc ggcaccacct gcctggacac caatcacaag ctcgagcatc gcgactacga 3481 aatcggtctg gagtgcacgg acgaagctgg caagattaaa catcatgaca atccttttat 3541 cgagcccgtc cagacacaaa cggtggtcga catgaaagat gtgatggtcc tgaatgacat 3601 catcgaacag gccgctggtc ggcacagtcg ggcaagcgat cgcggtgagg acgatgacga 3661 ggacgggccg acgttcaaag acaaggcact cgaagtgatc ctaaagggca tcgatgtgtt 3721 ttgtgtgtgg gactgttgct gggtttggtt gaaattgcag gagtggatct cgctgatcgt 3781 cttcgatccc ttcgtcgagc tcttcatcac gctgtgcatt gtggtcaaca cgatgttcat 3841 ggcgatggat caccacgata tgaacaagga gatggagcgc gtgctcaaga gtggcaacta 3901 tttcttcacg gccacctttg ccatcgaggc caccatgaag ctgtgcgcca tgagccccaa 3961 gtactatttc caggagggct ggaacatctt cgacttcatc atcgtggccc tgtcgctttt 4021 ggagctgggt ctcgagggcg tccagggcct gtccgtcttg cgttcgtttc gattgctgcg 4081 tgtatttaaa ttggccaaat cttggccaac acttaattta ctcatttcga ttatgggacg 4141 caccatgggc gctttgggta atctgacatt tgtactttgc attatcatct tcatctttgc 4201 ggtgatggga atgcaactgt tcggaaagaa ttatcatgat cacaaggacc gtttcccgga 4261 tggcgacctg ccgcgctgga acttcaccga ctttatgcac agcttcatga tcgtgttccg 4321 ggtgctctgc ggcgaatgga tcgagtccat gtgggactgt atgtacgtgg gcgatgtctc 4381 gtgcattccc ttcttcttgg ccaccgttgt catcggcaat cttgtggtac ttaacctttt 4441 cttagccttg cttttgtcca attttggctc atctagctta tcagcgccga ctgccgataa 4501 cgatacgaat aaaatagccg aggccttcaa tcgaattggc cgatttaaaa gttgggttaa 4561 gcgtaatatt gctgattgtt tcaagttaat acgtaacaaa ttgacaaatc aaataagtga 4621 tcaaccatca gagcatggtg acaacgaact ggagctgggg cacgacgaga tcctcgccga 4681 tggcctgatc aagaagggaa tcaaggagca gacgcaactg gaggtggcca tcggggatgg 4741 catggagttc acgatacacg gcgacatgaa gaacaacaag ccgaagaaat ccaaatatct 4801 aaataacgca acgatgattg gcaactcaat taaccaccaa gacaatagac tggaacacga 4861 gctaaaccat agaggtttgt ccttacagga cgacgacact gccagcatta actcatatgg 4921 tagccataag aatcgaccat tcaaggacga gagccacaag ggcagcgccg agacgatgga 4981 gggcgaggag aagcgcgacg ccagcaagga ggatttaggt ctcgacgagg aactggacga 5041 ggagggcgaa tgcgaggagg gcccgctcga cggtgatatc attattcatg cacacgacga 5101 ggatatactc gatgaatatc cagctgattg ctgccccgat tcgtactata agaaatttcc 5161 gatcttagcc ggtgacgatg actcgccgtt ctggcaagga tggggcaatt tacgactgaa 5221 aacttttcaa ttaattgaaa ataaatattt tgaaacagct gttatcacta tgattttaat 5281 gagtagctta gctttggcat tagaagatgt acatctgcca caaagaccca tactgcagga 5341 tattttatac tatatggaca gaatatttac ggttatattc ttcttggaaa tgttaatcaa 5401 gtggttggcg ctcggcttca aagtgtactt caccaacgcg tggtgttggc tcgatttcgt 5461 gattgtcatg gtatcgctta tcaacttcgt tgcttcactt gttggagctg gtggtattca 5521 agccttcaag actatgcgaa cgttaagagc actgagacca ctacgtgcca tgtcccgtat 5581 gcagggcatg agggtcgtcg ttaatgcgct ggtacaagct ataccgtcca tcttcaatgt 5641 gctattggtg tgtctaatat tttggctaat ttttgccata atgggtgtac agctttttgc 5701 tggaaaatat tttaagtgcg aggacatgaa cggcacgaag ctcagccacg agatcatacc 5761 aaatcgcaat gcctgcgaga gcgagaacta cacgtgggtg aattcagcaa tgaatttcga 5821 tcatgtaggt aacgcgtatc tgtgcctttt ccaagtggcc accttcaaag gctggataca 5881 aataatgaac gatgctatcg attcacgaga ggtggacaag caaccaattc gtgaaacgaa 5941 catctacatg tatttatatt tcgtattctt catcatattt ggatcatttt tcacactcaa 6001 tctgttcatt ggtgttatca ttgataattt taatgagcaa aagaaaaaag caggtggatc 6061 attagaaatg ttcatgacag aagatcagaa aaagtactat aatgctatga aaaagatggg 6121 ctctaaaaaa ccattaaaag ccattccaag accaaggtgg cgaccacaag caatagtctt 6181 tgaaatagta accgataaga aattcgatat aatcattatg ttattcattg gtctgaacat 6241 gttcaccatg accctcgatc gttacgatgc gtcggacacg tacaacgcgg tcctagacta 6301 tctcaatgcg atattcgtag ttattttcag ttccgaatgt ctattaaaaa tattcgcttt 6361 acgatatcac tattttattg agccatggaa tttatttgat gtagtagttg tcattttatc 6421 catcttaggt ctcgtactta gcgatattat cgagaagtac ttcgtgtcgc cgaccctgct 6481 ccgagtggtg cgtgtggcga aagtgggtcg agtcctgcga ctggtgaagg gcgccaaggg 6541 catcaggaca ctgctattcg cgttggccat gtcgctgccg gccctcttca acatctgcct 6601 gctgctgttc ctggtcatgt tcatcttcgc catcttcggc atgtcgttct tcatgcacgt 6661 gaaggagaag agcggcatca acgacgtcta caacttcaag acctttggtc agagcatgat 6721 cctgctcttt cagatgtcga cgtcagccgg ttgggatggt gtactggacg ccattatcaa 6781 tgaggaagca tgcgatccac ccgacaacga caaaggctat ccgggcaatt gtggttcagc 6841 gaccgttgga ataacgtttc tcctctcata cctagttata agctttttga tagttattaa 6901 tatgtacatt gctgtcattc tcgagaacta tagtcaggcc accgaggacg tgcaagaggg 6961 tctaaccgac gacgactacg acatgtacta cgagatctgg cagcaattcg atccggaggg 7021 cacccagtat atacgctacg accagctgtc cgaattcctg gacgtgctgg agcccccgct 7081 gcagatccat aagccgaaca agtacaagat catatcgatg gacataccca tctgtcgcgg 7141 cgacctcatg tactgtgtcg acatcctcga cgccctcacg aaagacttct ttgcgcgcaa 7201 gggcaatccg attgaggaga cgggcgagat cggtgagata gccgcccgtc cggacacgga 7261 gggctatgag cccgtctcat cgacgctgtg gcgccagcgg gaggagtact gtgcccgtct 7321 catccagcac gcctggcgga agcacaaggc gcgcggcgag ggcggtggtg gtggtggtgg 7381 gtccttcgag ccggatccgg atcaggtcga tggcgatggt ggtggcgatc cggatgccgg 7441 ggagcctgca aacgacgaac cggcggatgg gatggctgag gcccccgcag gaggaggagg 7501 aggaggagga ggaggagatg gtagtgttaa tggtggagga actggaactg gaactggaga 7561 cggagctgcc gatgctgccg acgagagcaa tgtaaatagt ccgggtgagg atgcagcgtc 7621 ggcggcagca ggagcggcga caggagcgac ggcgggaagt cccggggcgg gcagcgccgg 7681 acgacagacc gccgttctcg tggagagcga cgggttcgtg acgaagaacg gccacaaggt 7741 ggtcatccac tcgcgatcgc cgagcatcac gtcgcgcacg gcggatgtct gagccaggcc 7801 tcgccccccc ctccaagatg cacgcgagta ttagcatgag tacgtgttgg atgttgcatg 7861 ttgcgtgttg cgcgttgggt gcttaaccaa tccagtgcgt catgtgcaac taaacagtga 7921 gctaacaaca acagcgaaca aggcgaacaa caagcataat tttctgctat atataatgaa 7981 agtacaccat acaacaaaac aatcgaaaca aaccaacaac agtaacaaca tcatcaagag 8041 aacaaccaca acaacaacag taacaacaat cgatgaaata acgaagaaga acaacaacaa 8101 caccagtgta atgtctttga gttacaaaac atacatacat acatatacat actatatatt 8161 tgtatacccg cattattcag ttaacgagtc agcaaccaac aacaatcata cttaagctaa 8221 acaaccgaaa tgtcgaaata ttttgtaagc agctcgtagt ccaatccatt taggcgtttt 8281 ttccaaacca aacaatttgc ctaagcaggt ggaagaagaa gtaaaacatc aacacaccca 8341 cactagagct tgaaaatgat cgataaatac cgattcgata atatcgatgt tttcaaggca 8401 aaacacatat ttaatatcga gaaagtgcaa actgtcgata ttttccaagc tctaacatac 8461 acacaaaacc cacacacaac acactcacac ataaccataa acaaatataa tcccaaaaaa 8521 caaaaaacca aaaccgataa caaagttaaa gaacgatgaa caagctctaa aaattgtatt 8581 tgccagtagt gggacaacaa acaacacgct tgatttaatt aactaccaaa c