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LOCUS XM_044396221 8421 bp mRNA linear INV 09-DEC-2024 paralytic (para), transcript variant X31, mRNA. ACCESSION XM_044396221 VERSION XM_044396221.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044396221.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8421 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8421 /gene="para" /note="sodium voltage-gated channel paralytic; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins" /db_xref="GeneID:108059094" CDS 1397..7582 /gene="para" /codon_start=1 /product="sodium channel protein para isoform X31" /protein_id="XP_044252156.1" /db_xref="GeneID:108059094" /translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK RAEGEVIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPLEDIDPFYSNVL TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMI MPTTPTVESTDYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLR DVIILTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYHNRNSSNWY SEDEGISFPLCGNISGAGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQD FWEDLYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAE EEAIREAEEAAAAKAAKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELF VGGEKGNDDNNKEKMSIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTYTIRNGRG RFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLGSRHSS YTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNTRNQSVGATNGGTTCLDTNH KLEHRDYEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKDVMVLNDIIEQAAGRHSR ASDRGVSVYYFPTEDDDEDGPTFKDKALEVILKGIDVFCVWDCCWVWLKLQEWISLIV FDPFVELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYFFTATFAIEATMKLCAMS PKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLIS IMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHKDRFPDGDLPRWNFTDFMHS FMIVFRVLCGEWIESMWDCMYVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSS LSAPTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSGKGVCRC ISAEHGDNELELGHDEILADGLIKKGIKEQTQLEVAIGDGMEFTIHGDMKNNKPKKSK YLNNATDDDTASINSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGLDEELDEE GECEEGPLDGDIIIHAHDEDILDEYPADCCPDSYYKKFPILAGDDDSPFWQGWGNLRL KTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEM LIKWLALGFKVYFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLR AMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCEDMNGTK LSHEIIPNRNACESENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREV DKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQ KKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDIIIMLFIGLNMFTMTLDR YDASDTYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFIEPWNLFDVVVVILSILGLV LSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLF LVMFIFAIFGMSFFMHVKEKSGINDVYNFKTFGQSMILLFQMSTSAGWDGVLDAIINE EACDPPDNDKGYPGNCGSATVGITFLLSYLVISFLIVINMYIAVILENYSQATEDVQE GLTDDDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKIISMDIPI CRGDLMYCVDILDALTKDFFARKGNPIEETGEIGEIAARPDTEGYEPVSSTLWRQREE YCARLIQHAWRKHKARGEGGGGGGGSFEPDPDQVDGDGGGDPDAGEPANDEPADGMAE APAGGGGGGGGGDGSVNGGGTGTGTGDGAADAADESNVNSPGEDAASAAAGAATGATA GSPGAGSAGRQTAVLVESDGFVTKNGHKVVIHSRSPSITSRTADV" misc_feature 1817..2542 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 2891..3391 /gene="para" /note="Cytoplasmic domain of voltage-gated Na+ ion channel; Region: Na_trans_cytopl; pfam11933" /db_xref="CDD:463401" misc_feature 3620..4255 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 4331..5020 /gene="para" /note="Sodium ion transport-associated; Region: Na_trans_assoc; pfam06512" /db_xref="CDD:461936" misc_feature 5030..5845 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 5813..5971 /gene="para" /note="Inactivation gate of the voltage-gated sodium channel alpha subunits; Region: Na_channel_gate; cd13433" /db_xref="CDD:240441" misc_feature 5858..5869 /gene="para" /note="putative hydrophobic latch; other site" /db_xref="CDD:240441" misc_feature 5993..6745 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 6776..6919 /gene="para" /note="Voltage-dependent L-type calcium channel, IQ-associated; Region: GPHH; pfam16905" /db_xref="CDD:465306" ORIGIN 1 acagtttcag taaaccacgg agacgaacgg attacgggta acgaatcagc agcaacagtg 61 gcagcagcca tcagccagca gccagagaac aaaaaatatc aaagaaaaaa aaacagcact 121 taccaaaaaa aaaggaaata aaaatagtag tcaaaggagg accaaataaa aaaaacacaa 181 aaaactgaaa gagtaaaacc gaatataaaa acggcttaaa ggctaaaatc tcgagcactg 241 agtcctgtta aaaatatgaa ataaaaaagt tcacacactt gccgagccaa ccatatatat 301 atatatcata ctatatatat ataccatcat acatatatat atatccgata tataagtgcc 361 ttgagcagtg cgcaggcagt ccaaagtcca aagaaagttt tacataagtt ctccctcctc 421 aatcaggcaa cgtttttttt ctatagtttt ttttccgtga gtgtgaccca aaaacaaaaa 481 ataatcaaag agaaggaaag gcagcagcag caagaagaag cacaagcaga ataagaagaa 541 gaagaaaacg gaggagaaga agaaggagaa taagaagaag cagccagcca gccatcagga 601 aaacacaaaa gtcaaaaaac aaactatata gagctgagct ggccccaaaa aaaaagaata 661 tataaaaact ctgggaacaa aacgcaacgt ttgatgaaaa tttttggcaa ctcgtcgcgt 721 cgtcttggtt gttgttaacc acatcctgct aacgccaaag tccgaaaata aaattcaacc 781 caaataccca aaaataacac agatcaaaca aacaaagcaa aaaaaaagca aacaaaataa 841 caaaaaaaaa ccaaaaaaaa aaacaaacaa aaaattcatc ttctacttgt tctaccgctt 901 caactttatt cgtcttcgtc tccgtaataa atatataaaa agtatataca tatatatata 961 tatatatatg catatgtgtg tgagtgcgtc gcgtgtgtgt tggtgcctgt aaatgtgtga 1021 gccacaacaa caacaacagc agcagcagcc agagccagag caacaaccac agcagcagca 1081 acaacaacaa caacaacagt agttaacagc agcaacaatt cttagcagca ataacaatac 1141 aagcaagcac caccacaaca acaagagcag caacaacacc aaaaacagcc acaatagcaa 1201 tcacaataac aacatcaaag gatagagcga gcagccaagc acaacatcga ttgacatcga 1261 ttaacgcatc gtgctaagcg gcgggcgcta atcgaacatg gcgcctcgga tatagttgta 1321 gctttaatgt agcaggcgac atccatgtgc ctcatgcctt ggaaatctaa ggctctcatc 1381 gttggccgca tagacaatga cagaagattc cgactcgata tctgaggaag aacgcagttt 1441 gttccgtccc tttacccgcg aatcattggt gcaaatcgaa caacgcattg ccgctgaaca 1501 tgaaaagcag aaggagctgg aaagaaagag agccgaggga gaggtgatcc gatatgatga 1561 cgaggacgag gatgaaggtc cacaaccgga tcctacactt gaacagggtg tgccaatacc 1621 tgttcgattg cagggcagct tcccgccgga attggcctcc actcctctcg aggatatcga 1681 tcccttctac agcaatgtac tgacattcgt agttgtaagc aaaggaaaag atatttttcg 1741 cttttctgca tcaaaagcaa tgtggatgct cgatccattc aatccgatac gtcgtgtggc 1801 catttacatt ctagtgcatc cattattttc cctattcatc atcaccacaa ttctcgtcaa 1861 ctgcatcctg atgataatgc cgacaacgcc cacggttgag tccactgatt atgtgaccat 1921 gggtatagat ttaggtaatc tagcagcctt gcgaacgttt agggtgctgc gagcgcttaa 1981 aaccgtagcc attgtgccag gcttgaagac catcgtcggc gccgtcatcg aatcggtgaa 2041 gaatctgcgc gatgtgataa tcctcaccat gttctccctg tcggtcttcg cgctgatggg 2101 cctgcagatc tacatgggcg tgctcacgca gaagtgcatc aagaagttcc cgctggacgg 2161 ctcctggggc aatctgaccg acgagaactg ggactatcac aatcgcaaca gctccaattg 2221 gtactcggag gacgagggca tctcatttcc gctgtgcggc aatatatccg gcgcggggca 2281 atgcgacgat gactacgtgt gtctgcaggg gtttgggccg aatccgaact acggctacac 2341 cagcttcgat tcattcggct gggccttcct gtccgccttc cggctgatga cacaggactt 2401 ctgggaggac ctctaccagc tggtgttgcg cgccgccgga ccatggcaca tgctgttctt 2461 tatagtcatc atcttcctag gttcattcta tcttgtgaat ttgattttgg ccattgttgc 2521 catgtcgtat gacgaattgc aaaagaaggc cgaagaagaa gaggctgccg aagaggaggc 2581 gatacgtgaa gcggaggagg ctgccgccgc caaagctgcc aagctggagg agcgggccaa 2641 tgcgcaggct caggcagcag cggatgcggc tgccgccgaa gaggctgcac tgcatccgga 2701 gatggccaag agtccgacgt attcgtgcat cagctatgag cttttcgttg gcggcgagaa 2761 gggcaacgat gacaacaaca aggagaagat gtccattcgc agcgtcgagg tggagtcgga 2821 gtcggtgagc gttatacaaa gacaaccagc acctaccaca gcacaccaag ctaccaaagt 2881 tcgtaaagtg agcacgtaca cgatacggaa cggacgtggc cgctttggta tacccggtag 2941 cgatcgcaag ccgttggtat tgtcaacata tcaggatgcc cagcagcact tgccctatgc 3001 cgacgactcg aatgccgtca ccccgatgtc cgaggagaac ggggccatca tagtgcccgt 3061 gtactatggc aacctaggct ctcggcactc atcgtatacc tcgcatcagt cccgaatatc 3121 gtatacctca catggcgatc tactcggcgg catggccgtc atgggcgtca gcacaatgac 3181 caaggagagc aaattgcgca accgcaacac acgcaatcaa tcagtgggcg ccaccaatgg 3241 cggcaccacc tgcctggaca ccaatcacaa gctcgagcat cgcgactacg aaatcggtct 3301 ggagtgcacg gacgaagctg gcaagattaa acatcatgac aatcctttta tcgagcccgt 3361 ccagacacaa acggtggtcg acatgaaaga tgtgatggtc ctgaatgaca tcatcgaaca 3421 ggccgctggt cggcacagtc gggcaagcga tcgcggtgtc tccgtttact attttccaac 3481 agaggacgat gacgaggacg ggccgacgtt caaagacaag gcactcgaag tgatcctaaa 3541 gggcatcgat gtgttttgtg tgtgggactg ttgctgggtt tggttgaaat tgcaggagtg 3601 gatctcgctg atcgtcttcg atcccttcgt cgagctcttc atcacgctgt gcattgtggt 3661 caacacgatg ttcatggcga tggatcacca cgatatgaac aaggagatgg agcgcgtgct 3721 caagagtggc aactatttct tcacggccac ctttgccatc gaggccacca tgaagctgtg 3781 cgccatgagc cccaagtact atttccagga gggctggaac atcttcgact tcatcatcgt 3841 ggccctgtcg cttttggagc tgggtctcga gggcgtccag ggcctgtccg tcttgcgttc 3901 gtttcgattg ctgcgtgtat ttaaattggc caaatcttgg ccaacactta atttactcat 3961 ttcgattatg ggacgcacca tgggcgcttt gggtaatctg acatttgtac tttgcattat 4021 catcttcatc tttgcggtga tgggaatgca actgttcgga aagaattatc atgatcacaa 4081 ggaccgtttc ccggatggcg acctgccgcg ctggaacttc accgacttta tgcacagctt 4141 catgatcgtg ttccgggtgc tctgcggcga atggatcgag tccatgtggg actgtatgta 4201 cgtgggcgat gtctcgtgca ttcccttctt cttggccacc gttgtcatcg gcaatcttgt 4261 ggtacttaac cttttcttag ccttgctttt gtccaatttt ggctcatcta gcttatcagc 4321 gccgactgcc gataacgata cgaataaaat agccgaggcc ttcaatcgaa ttggccgatt 4381 taaaagttgg gttaagcgta atattgctga ttgtttcaag ttaatacgta acaaattgac 4441 aaatcaaata agtgatcaac catcaggcaa aggcgtttgt cgttgtatat ctgcagagca 4501 tggtgacaac gaactggagc tggggcacga cgagatcctc gccgatggcc tgatcaagaa 4561 gggaatcaag gagcagacgc aactggaggt ggccatcggg gatggcatgg agttcacgat 4621 acacggcgac atgaagaaca acaagccgaa gaaatccaaa tatctaaata acgcaacgga 4681 cgacgacact gccagcatta actcatatgg tagccataag aatcgaccat tcaaggacga 4741 gagccacaag ggcagcgccg agacgatgga gggcgaggag aagcgcgacg ccagcaagga 4801 ggatttaggt ctcgacgagg aactggacga ggagggcgaa tgcgaggagg gcccgctcga 4861 cggtgatatc attattcatg cacacgacga ggatatactc gatgaatatc cagctgattg 4921 ctgccccgat tcgtactata agaaatttcc gatcttagcc ggtgacgatg actcgccgtt 4981 ctggcaagga tggggcaatt tacgactgaa aacttttcaa ttaattgaaa ataaatattt 5041 tgaaacagct gttatcacta tgattttaat gagtagctta gctttggcat tagaagatgt 5101 acatctgcca caaagaccca tactgcagga tattttatac tatatggaca gaatatttac 5161 ggttatattc ttcttggaaa tgttaatcaa gtggttggcg ctcggcttca aagtgtactt 5221 caccaacgcg tggtgttggc tcgatttcgt gattgtcatg gtatcgctta tcaacttcgt 5281 tgcttcactt gttggagctg gtggtattca agccttcaag actatgcgaa cgttaagagc 5341 actgagacca ctacgtgcca tgtcccgtat gcagggcatg agggtcgtcg ttaatgcgct 5401 ggtacaagct ataccgtcca tcttcaatgt gctattggtg tgtctaatat tttggctaat 5461 ttttgccata atgggtgtac agctttttgc tggaaaatat tttaagtgcg aggacatgaa 5521 cggcacgaag ctcagccacg agatcatacc aaatcgcaat gcctgcgaga gcgagaacta 5581 cacgtgggtg aattcagcaa tgaatttcga tcatgtaggt aacgcgtatc tgtgcctttt 5641 ccaagtggcc accttcaaag gctggataca aataatgaac gatgctatcg attcacgaga 5701 ggtggacaag caaccaattc gtgaaacgaa catctacatg tatttatatt tcgtattctt 5761 catcatattt ggatcatttt tcacactcaa tctgttcatt ggtgttatca ttgataattt 5821 taatgagcaa aagaaaaaag caggtggatc attagaaatg ttcatgacag aagatcagaa 5881 aaagtactat aatgctatga aaaagatggg ctctaaaaaa ccattaaaag ccattccaag 5941 accaaggtgg cgaccacaag caatagtctt tgaaatagta accgataaga aattcgatat 6001 aatcattatg ttattcattg gtctgaacat gttcaccatg accctcgatc gttacgatgc 6061 gtcggacacg tacaacgcgg tcctagacta tctcaatgcg atattcgtag ttattttcag 6121 ttccgaatgt ctattaaaaa tattcgcttt acgatatcac tattttattg agccatggaa 6181 tttatttgat gtagtagttg tcattttatc catcttaggt ctcgtactta gcgatattat 6241 cgagaagtac ttcgtgtcgc cgaccctgct ccgagtggtg cgtgtggcga aagtgggtcg 6301 agtcctgcga ctggtgaagg gcgccaaggg catcaggaca ctgctattcg cgttggccat 6361 gtcgctgccg gccctcttca acatctgcct gctgctgttc ctggtcatgt tcatcttcgc 6421 catcttcggc atgtcgttct tcatgcacgt gaaggagaag agcggcatca acgacgtcta 6481 caacttcaag acctttggtc agagcatgat cctgctcttt cagatgtcga cgtcagccgg 6541 ttgggatggt gtactggacg ccattatcaa tgaggaagca tgcgatccac ccgacaacga 6601 caaaggctat ccgggcaatt gtggttcagc gaccgttgga ataacgtttc tcctctcata 6661 cctagttata agctttttga tagttattaa tatgtacatt gctgtcattc tcgagaacta 6721 tagtcaggcc accgaggacg tgcaagaggg tctaaccgac gacgactacg acatgtacta 6781 cgagatctgg cagcaattcg atccggaggg cacccagtat atacgctacg accagctgtc 6841 cgaattcctg gacgtgctgg agcccccgct gcagatccat aagccgaaca agtacaagat 6901 catatcgatg gacataccca tctgtcgcgg cgacctcatg tactgtgtcg acatcctcga 6961 cgccctcacg aaagacttct ttgcgcgcaa gggcaatccg attgaggaga cgggcgagat 7021 cggtgagata gccgcccgtc cggacacgga gggctatgag cccgtctcat cgacgctgtg 7081 gcgccagcgg gaggagtact gtgcccgtct catccagcac gcctggcgga agcacaaggc 7141 gcgcggcgag ggcggtggtg gtggtggtgg gtccttcgag ccggatccgg atcaggtcga 7201 tggcgatggt ggtggcgatc cggatgccgg ggagcctgca aacgacgaac cggcggatgg 7261 gatggctgag gcccccgcag gaggaggagg aggaggagga ggaggagatg gtagtgttaa 7321 tggtggagga actggaactg gaactggaga cggagctgcc gatgctgccg acgagagcaa 7381 tgtaaatagt ccgggtgagg atgcagcgtc ggcggcagca ggagcggcga caggagcgac 7441 ggcgggaagt cccggggcgg gcagcgccgg acgacagacc gccgttctcg tggagagcga 7501 cgggttcgtg acgaagaacg gccacaaggt ggtcatccac tcgcgatcgc cgagcatcac 7561 gtcgcgcacg gcggatgtct gagccaggcc tcgccccccc ctccaagatg cacgcgagta 7621 ttagcatgag tacgtgttgg atgttgcatg ttgcgtgttg cgcgttgggt gcttaaccaa 7681 tccagtgcgt catgtgcaac taaacagtga gctaacaaca acagcgaaca aggcgaacaa 7741 caagcataat tttctgctat atataatgaa agtacaccat acaacaaaac aatcgaaaca 7801 aaccaacaac agtaacaaca tcatcaagag aacaaccaca acaacaacag taacaacaat 7861 cgatgaaata acgaagaaga acaacaacaa caccagtgta atgtctttga gttacaaaac 7921 atacatacat acatatacat actatatatt tgtatacccg cattattcag ttaacgagtc 7981 agcaaccaac aacaatcata cttaagctaa acaaccgaaa tgtcgaaata ttttgtaagc 8041 agctcgtagt ccaatccatt taggcgtttt ttccaaacca aacaatttgc ctaagcaggt 8101 ggaagaagaa gtaaaacatc aacacaccca cactagagct tgaaaatgat cgataaatac 8161 cgattcgata atatcgatgt tttcaaggca aaacacatat ttaatatcga gaaagtgcaa 8221 actgtcgata ttttccaagc tctaacatac acacaaaacc cacacacaac acactcacac 8281 ataaccataa acaaatataa tcccaaaaaa caaaaaacca aaaccgataa caaagttaaa 8341 gaacgatgaa caagctctaa aaattgtatt tgccagtagt gggacaacaa acaacacgct 8401 tgatttaatt aactaccaaa c