PREDICTED: Drosophila takahashii Rbp1-like (Rbp1-like), transcript

LOCUS       XM_044396213             995 bp    mRNA    linear   INV 09-DEC-2024
            variant X1, mRNA.
ACCESSION   XM_044396213
VERSION     XM_044396213.2
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_044396213.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..995
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..995
                     /gene="Rbp1-like"
                     /note="Rbp1-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:108070148"
     CDS             184..939
                     /gene="Rbp1-like"
                     /codon_start=1
                     /product="RNA-binding protein Rsf1 isoform X1"
                     /protein_id="XP_044252148.1"
                     /db_xref="GeneID:108070148"
                     /translation="MPRYREWDLACKVYVGNLGSSASKYEIENAFSKYGPLRNVWVAR
                     NPPGFAFVEFEDRRDAEDATRGLDGTRCCGTRIRVEMSSGRSREGRGGGGGGGGGGGS
                     GGGGRGGGSGARAGGGTRAGDGGGRYRIKSSSSTTTSTTRTTTTTTTSIIIIIIKRTT
                     KKKKKKRKTTATTTRTSTTPLPSTTTTTTKRTTTATTRTTTTSTTADPAPPITHISPP
                     TTTATTTTPPCNNNNLLCGPSQSQKFNKFDIFR"
     misc_feature    217..426
                     /gene="Rbp1-like"
                     /note="RNA recognition motif (RRM) found in
                     serine/arginine-rich splicing factor 3 (SRSF3) and similar
                     proteins; Region: RRM_SRSF3_like; cd12373"
                     /db_xref="CDD:409808"
     polyA_site      995
                     /gene="Rbp1-like"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cctagacaga acgccatctt tttttcccca caaacatttt ttcttgtcct gtttttgggt
       61 gtgtttgctg cgcataaaac cgaaggaaac ccaaataaaa ggccccaaaa gaggaggaaa
      121 atccaccgag acagctgaga cagctagcta ggctgcatag atacacacac ttaacccgac
      181 ataatgccac gctaccggga atgggacttg gcctgcaagg tgtacgtggg caacctgggc
      241 tcctcggcct ccaagtacga gattgagaac gccttcagca aatacggacc cttgcgcaac
      301 gtctgggtgg cccgcaatcc gcccggcttc gccttcgtcg agttcgagga tcgccgcgat
      361 gcggaggacg cgacccgcgg cctcgacggc acccgctgct gcggcacccg catccgcgtc
      421 gagatgtcct ccggccgttc gcgcgagggg cgtggcgggg gcggcggcgg cggtggtggt
      481 ggcggctccg ggggcggtgg ccgcggcgga ggcagcggag cccgcgctgg aggcggcaca
      541 agagctggcg acggcggcgg tcgctatagg ataaagtctt cttcttctac tacaacaagc
      601 acaacaagaa ctactactac aacaacaaca tcaataataa taataataat taaaagaaca
      661 acaaaaaaaa agaaaaagaa aagaaaaaca acagctacta ctactagaac ttctactact
      721 cctcttcctt caacaacaac aacaacaaca aaaagaacaa caacagctac tacaagaaca
      781 acaacaacta gtacaacagc agatcctgct cctcctatta cacacatttc accaccaaca
      841 acaacagcca ccaccaccac accaccatgc aataataaca atttgttgtg cggccctagt
      901 cagagtcaga aattcaacaa attcgatata ttccgctgac cacagaaccg agaaccgaac
      961 gaccgcaaca ctacaccaac cacccctcca ccacc