PREDICTED: Drosophila takahashii tropomyosin alpha-1 chain

LOCUS       XM_044396200            1532 bp    mRNA    linear   INV 09-DEC-2024
            (LOC108060886), mRNA.
ACCESSION   XM_044396200
VERSION     XM_044396200.2
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_044396200.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 29% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1532
                     /gene="LOC108060886"
                     /note="tropomyosin alpha-1 chain; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:108060886"
     CDS             1..1353
                     /gene="LOC108060886"
                     /codon_start=1
                     /product="tropomyosin alpha-1 chain"
                     /protein_id="XP_044252135.1"
                     /db_xref="GeneID:108060886"
                     /translation="MEDEGCTTDKELYEVMMTTRKLFKKLDERIGEEMKTMAKPKSQE
                     DDSSSDEVQVDNAFLKYLLRMVQKRLHEETQRYAALQDEVLATRDRMVADQKRIAKIK
                     DKLRFLCNMSDEANEWMDDLEASEDSMLLVLVSPEESDAEIEEKPQQAVQELLEQPMD
                     AENRLLAIRFFNLMLARLWRRRRAEVCDLHTLVRKYQAHAARTQTELFTRNQMICLEQ
                     RRGEQLTHQLMRAISRVHVSMESCAQLDSELQQVRMREATLHNELESKSLECEYFSEM
                     LDTCRSEMFRELAKYREGATELANQQRRALELERENAQLEDELLTIKDRFLLQNDQMS
                     VALGEKQEQLNTAYETLKNCEQELAKLELKYNEALRQSEIDVELQKEISNLRRNMGVA
                     RCLIFYLTAREWGTLQGCVYHVVAGTLDCLAPSFSTPPMADNLLRMALAAIFLLFAMY
                     "
     misc_feature    <646..>1161
                     /gene="LOC108060886"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; Region:
                     Smc; COG1196"
                     /db_xref="CDD:440809"
ORIGIN      
        1 atggaagacg aaggctgcac caccgacaag gagctttacg aagttatgat gacaacgcga
       61 aaattgttca agaagctgga cgagagaatt ggtgaggaaa tgaagacgat ggccaagcca
      121 aagagtcaag aggacgactc cagcagtgat gaggtccaag tggataatgc attcctgaag
      181 taccttctcc gaatggtgca aaagcgtcta cacgaggaga cccaacgata tgccgccctg
      241 caggacgagg tcctggcgac tcgggatcga atggtcgccg accagaagcg catcgcgaag
      301 attaaggaca agttgaggtt tctctgcaac atgagcgacg aggccaacga gtggatggac
      361 gacttggagg caagcgaaga tagcatgcta cttgtacttg tatctcccga ggaaagtgat
      421 gcggaaatcg aggagaagcc acaacaggca gtgcaggagc tgttggaaca gccaatggat
      481 gcggaaaacc gactgctggc catcaggttc ttcaatctca tgctggcgag actctggcgc
      541 cggcgaagag ccgaagtctg tgacctccac actctggttc gcaagtacca ggctcatgcc
      601 gctcgaaccc aaacggagct attcacccga aaccagatga tctgcctgga gcagcgtcgt
      661 ggggaacagc tgacccatca gctgatgagg gccatcagtc gcgtccacgt gtccatggaa
      721 agctgcgccc agctggacag cgagttgcag caggtgagaa tgcgggaggc cacactgcac
      781 aacgaactgg agtccaagtc gctggagtgc gagtacttct ccgaaatgct cgacacctgc
      841 cgctccgaaa tgttccgcga gctggccaaa taccgggagg gagccaccga gttggccaac
      901 caacagaggc gagccctcga attggagcgc gagaacgccc agttggagga cgagctgctg
      961 acgatcaagg accggtttct cctgcagaat gaccagatgt ccgtggccct gggcgagaaa
     1021 caggagcagc tgaataccgc ctatgagacg ctaaagaact gcgaacagga actggccaag
     1081 ctggagctga aatacaacga ggcactgcgc cagagcgaga tcgatgtgga actgcagaag
     1141 gagatctcga atctgaggcg gaacatgggc gtggcccgat gcctgatctt ctatctgacg
     1201 gcccgtgaat ggggaaccct tcagggttgc gtataccacg tggtggccgg aactctcgac
     1261 tgtctggcgc cctcgttttc cacaccgccg atggcggaca atctgctccg aatggcgttg
     1321 gctgccatct tcctgctatt tgccatgtac tgagttgaat acggatacgg aatagagttt
     1381 tcgataggcg agcagcagtg ggggttcggg gatcttgtta gaaaattcag gacacacgaa
     1441 cacaaatttg ttgcacacac ttattagata gcatttcgtt tttttttttt gtcacagtat
     1501 ttaactacaa agaacaaaaa aaattataat aa