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LOCUS XM_044396186 4963 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_044396186 VERSION XM_044396186.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq; corrected model; includes ab initio. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases frameshifts :: corrected 1 indel ##RefSeq-Attributes-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-21 JARPSC010000001.1 19734058-19734078 22-51 JARPSC010000001.1 19735099-19735128 52-53 "NN" 1-2 54-1261 JARPSC010000001.1 19735129-19736336 1262-1452 JARPSC010000001.1 19737388-19737578 1453-1562 JARPSC010000001.1 19755727-19755836 1563-1815 JARPSC010000001.1 19755906-19756158 1816-2114 JARPSC010000001.1 19756952-19757250 2115-2414 JARPSC010000001.1 19760679-19760978 2415-2549 JARPSC010000001.1 19761908-19762042 2550-2650 JARPSC010000001.1 19762207-19762307 2651-4963 JARPSC010000001.1 19762425-19764737 FEATURES Location/Qualifiers source 1..4963 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4963 /gene="Dop2R" /note="dopamine D2-like receptor; The sequence of the model RefSeq transcript was modified relative to its source genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108057278" CDS 1..2862 /gene="Dop2R" /note="The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon" /codon_start=1 /product="LOW QUALITY PROTEIN: dopamine D2-like receptor" /protein_id="XP_044252121.1" /db_xref="GeneID:108057278" /translation="MRPWQSARLSPFDWRRGXSGSGIGCIMAAQPLSSTSAATSAATT GATTVATGSAGATTATLAASTSTAASSASGASAGATWMQQHHSQLVADGDLDLQANGT DASAGVEGPTMPAGYLPLYEDVETAAEDAGYALIDDISEWLLGGSVGSGGGGGGGGAG NSTTLAVTAGGGANETLGWLEVLNSTLPSSHRSGGHHNTSSEVEASAEEAAEGRGRGR YALRSFVEQQLATGGEGAAGGAAGGGGGDAGIALIDSGEEAALDNVADAETDYGLLGG FGFGDAELLQRTAAAARETLSNRTAPAITSYDGGGSGGLAGTGGAGVGGGAGGGGRSG GSTFMLLLENFNDYFPNYNGSTVSGTTTIAPGAGAGMGVAITGGRGGGGLLLEQNLTG LYLDGYRLNCTNETLGLNLTDSCAELRVVDHNYWALILILFPILTLFGNILVILSVCR ERSLQTVTNYFIVSLAIADLLVAVVVMPFAVYFLVNGVWALPDVVCDFYIAMDVICST SSIFNLVAISIDRYIAVTQPIKYAKHKNSRRVCLTILLVWAISAAIGSPIVLGLNNTP NREPDVCAFYNADFILYSSLSSFYIPCIIMVFLYWNIFKALRSRARKQRAARKPHLSE LTGGSVIENIAQTRRLAETALDSSRHASRIMPDEAATNTASGSNEEEDENAISPDIDD CHVIVNDKSTEFMLATVVEETGNVVAQITTQPQLVVADPNGNHDSGYAASNVDDVLAG VAPASVASAATSGAQRSSGSPPDSPLPSGATLQRSSVSSQRRPTADDSPKRGDPTLRS VGVDNSSVAMKPLSFVRYGVQEAMTLARNDSTLSTTSKTSSRKDKKNSQASRFTIYKV HKASKKKREKSSAKKERKATKTLAIVLGVFLFCWLPFFSCNIMDAMCAKFKKDCRPGL TAYMMTTWLGYINSFVNPVIYTIFNPEFRKAFKKIMHMG" misc_feature 1270..>1839 /gene="Dop2R" /note="D2-like dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Region: 7tmA_D2-like_dopamine_R; cd15053" /db_xref="CDD:320181" misc_feature 1273..1353 /gene="Dop2R" /note="TM helix 1 [structural motif]; Region: TM helix 1" /db_xref="CDD:320181" misc_feature 1372..1452 /gene="Dop2R" /note="TM helix 2 [structural motif]; Region: TM helix 2" /db_xref="CDD:320181" misc_feature 1486..1578 /gene="Dop2R" /note="TM helix 3 [structural motif]; Region: TM helix 3" /db_xref="CDD:320181" misc_feature 1612..1683 /gene="Dop2R" /note="TM helix 4 [structural motif]; Region: TM helix 4" /db_xref="CDD:320181" misc_feature 1729..1818 /gene="Dop2R" /note="TM helix 5 [structural motif]; Region: TM helix 5" /db_xref="CDD:320181" misc_feature <2608..2838 /gene="Dop2R" /note="seven-transmembrane G protein-coupled receptor superfamily; Region: 7tm_GPCRs; cl28897" /db_xref="CDD:475119" misc_feature 2626..2694 /gene="Dop2R" /note="TM helix 6 [structural motif]; Region: TM helix 6" /db_xref="CDD:410628" misc_feature 2740..2817 /gene="Dop2R" /note="TM helix 7 [structural motif]; Region: TM helix 7" /db_xref="CDD:410628" polyA_site 4963 /gene="Dop2R" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atgcggccat ggcagtcggc aaggttgagc ccattcgatt ggcggcgggg annatccggc 61 agcggaatcg gctgcatcat ggccgcccag ccattgagca gcacatcggc ggcaacatct 121 gcggcaacaa cgggagcaac aaccgtggca accggttcgg ccggagccac aacggcgacc 181 ctggccgctt ccacatcgac ggcagcctca tccgcatcgg gagcatccgc gggagccacg 241 tggatgcagc aacaccactc ccaactggtg gcggatgggg atctggatct ccaggcgaac 301 ggcaccgatg cgtcggcggg cgttgagggc cccacaatgc cggccggcta cttgccgctc 361 tacgaggatg tggaaacggc ggcggaggac gccggctatg cgctgatcga cgacatcagc 421 gagtggctct tgggtggttc ggtgggcagt ggtggtggtg gtggtggtgg tggggcaggg 481 aacagtacga ccttggcggt gacagccggt ggaggcgcca acgaaacgct gggctggctg 541 gaagtgctga atagcacgct gccgagttcc caccgcagtg gcggccacca caacaccagt 601 tcggaggtgg aggcgtcggc ggaggaggcg gcggaggggc gtggccgggg gcggtacgcc 661 ttgcgcagct ttgtggagca acagctggcg acgggtggcg agggggcggc gggcggagcg 721 gccggtggcg gcggcggcga tgctggcatc gcgctgatcg acagcggcga ggaggcggca 781 ctggacaacg tggcggatgc ggaaacggac tacggcctgc tgggcggctt tggcttcggc 841 gatgccgagc tgctgcagcg gacggcggcg gcggcccggg aaacgctcag caatcgaacg 901 gcgccggcca tcactagcta cgatggaggc ggctctggcg gactggctgg aaccggagga 961 gccggggtcg gcggaggagc aggaggagga ggcagatcag ggggcagcac ctttatgctg 1021 ctgctcgaaa actttaacga ttattttccc aactacaatg ggagcacggt ttcgggaaca 1081 acaaccattg cgccgggggc gggagcgggc atgggcgtgg caatcaccgg gggaaggggc 1141 ggcggcggcc tgctgctcga gcagaacctc acgggactgt acctcgatgg ctaccggctc 1201 aactgcacca acgagacgct cggcctcaac ctcaccgact cgtgtgccga gctgagagtg 1261 gtggaccaca actactgggc gctcatcctg attctgttcc ccatcctgac cctcttcggc 1321 aacatcctgg tcatcctgtc cgtgtgccgc gagcgctcgc tgcagacagt cacaaattat 1381 tttatagtct cgttggccat cgccgatctc ctggtcgccg tggtcgtgat gccatttgct 1441 gtctattttc tggtaaatgg agtctgggcc ctgcctgacg ttgtttgtga tttctatata 1501 gccatggatg tgatatgctc tacttcatcg atattcaact tagttgccat ctccatagac 1561 agatacatcg ctgtgacaca gccaataaag tacgccaagc acaaaaatag ccgccgcgtt 1621 tgccttacga tactgctggt ttgggccata tcggctgcca tcggttcgcc gatagttttg 1681 ggcctcaaca acacgcccaa tcgcgagccc gatgtgtgcg ccttctacaa cgccgacttt 1741 atactctact cctcgctgag cagcttctat ataccctgca ttatcatggt gtttctctac 1801 tggaacattt tcaaggccct gagaagtcgg gcgcggaagc agcgggcggc ccgcaagccc 1861 cacctatcgg agctcacggg cggcagcgtc atcgagaaca tcgcccagac gcgccgcctg 1921 gcggagacgg cgctggacag cagccggcat gccagcagga taatgccgga cgaggcggcc 1981 accaacacgg ccagcggctc caacgaggag gaggacgaga atgccatttc gccggacatc 2041 gacgactgcc acgtcatcgt gaacgacaag tccaccgagt tcatgctggc caccgtcgtc 2101 gaggagacgg gcaacgttgt ggcccaaatc accacacagc cgcagttggt cgtcgccgat 2161 ccgaatggta atcatgattc tggttatgca gcctcaaacg ttgacgatgt ccttgcaggc 2221 gtggcgcccg cctccgtcgc ctccgccgcc acatccggcg cccagcggag cagcggctcg 2281 ccgccggaca gcccgctgcc cagtggcgcc accctccagc ggtccagcgt cagcagccag 2341 cggcgcccca ccgccgacga ctcgccgaag cgcggcgatc cgactctcag gtcagtcggt 2401 gtcgataact ccagcgtcgc catgaagcca ttgtcctttg tccgctacgg agtgcaggag 2461 gccatgactt tggcacgcaa cgactcaacg ctatcgacca catcgaaaac gtcctcgcgc 2521 aaggataaga agaactcgca ggcgtcaaga ttcacgatat acaaggtgca caaggcttcg 2581 aaaaagaaac gcgaaaaatc gtcggcgaaa aaggaacgca aggctaccaa aacattggcc 2641 attgttttgg gtgtcttcct cttctgctgg ctgcccttct tcagctgcaa catcatggac 2701 gccatgtgcg ccaagttcaa gaaagactgc cgaccgggtc tgacggccta catgatgacc 2761 acctggctgg gctacatcaa cagcttcgtg aacccggtga tctacacgat attcaatccc 2821 gagtttcgca aggccttcaa gaagatcatg cacatggggt gattaaacaa gcgaatagca 2881 atagcaactg caagaatatc catgatggat gatgatgatg ataatgatga aataatgata 2941 tgccaaatga aagccatcga tgcacaagag atctcaaccg ttgtgcatgg ggctttagat 3001 tcgtttcgtt tgtcgttcgt tggcttctcc aatagcatta aggttcagct acttatgtaa 3061 atagatctgt atatacctct attcggttag gcccatccat atatcccgag agtcagagct 3121 gtaggctagg tacaattttt aacaattaca ttaagctaaa cctaactagc gatataatca 3181 agacaaaaca caaaggacaa aagacacacg acaacacaca gtaaacacgc gattaacata 3241 agttacgctt taacaggata atgtagtgtt ctttgtaggc tgctcccgaa aacctatcac 3301 atatcatgag cagcaagcta ttaccaaaca cccaccccca ccacacagcc cccaatattt 3361 gattagataa gagtgtattc aagaaattca tatccttgaa ggttctgctg gcgattgtgt 3421 cgtcggtaca tagagttagt tagttaaatc atcagagata aggtagaaaa gcgggccttg 3481 aggtcggcgc cttccaccac agacacacat cacatgtacg atgggtttcc gatacaaaaa 3541 caaaaaaaga aatggtcgat tgggaaatgg aaatggaaac cgaaccgaac cattggagaa 3601 gtgacacgca cacacacacg aacagacacc ataaatcaaa tgagccccac aaatgaacac 3661 aatatcgagg ggcgccgacc tcgatgctaa aacccgctta gagctcactt ttcgttcgac 3721 tttcagttca tagagatgat atataagagc atttaagatc cagaggtcgt acctaggcta 3781 gtcacttaat atatagatct aggactcatt atatatcgca tagtaccaag gggggtaggc 3841 actatagggg gcctggggat gcatagcaag gagggggaga atcagggtat ctagagcaaa 3901 ggctatcgca ttgctagaag caatatgcgg ggaaaatcag agaaatcaga gctcctaatc 3961 ggagcgctac catagcagat atactcatcg gtttaagcgt acgtacgtgt atagtgaaat 4021 atcaaaactg agttttgaaa cacggaccaa ggcctttggt ctgccgaaag gactatctga 4081 aatcggcagg ggcgaaggcg tttggtccct gatttcaaca gccgtcctct taactgtttc 4141 tatgtgacaa ataattgata ggtaattact cctactacgt gtagtagttt ataaaacaat 4201 tccatttata gtatacaagt aagcttaggc gtaagcagtg tcccccagct cacatttcca 4261 ggaaaagctc aaaagttttt atactttcct aaaaactaaa aattaaaaac caaaaactcc 4321 aatacagata tagagtcgcc gtgtgtttga gtgactgctt gagtaagtgc gtgtgttggt 4381 gactgcttgt ttttttgtct aaagtttaga actctagtcg ataagtttag gctaagacta 4441 tggaaacagt tcaactttca gatcagtgcg aaatgccctt aagttaggtt cttccaaagg 4501 aaacgcttat taattatagc taattggtaa tttttgcaat ttgaacaaac tatttatacg 4561 tacacacaca cacacataca cacacgttta ctgttgattt atcaaaattg tagcctgagt 4621 ttttaaatcg ttgaattgtt gtctgttatc gttaatttgt gaatgagata tagcatagtt 4681 ttaatgaccc tccgtagcga gatctctcta ccaataaagc atatatatat acgagtttgt 4741 aaaataactg aaatggaaac atggaaactg gaaaactgaa atgaaaatga aaactatttt 4801 aaagaaatgg caagaaattt gtggtttttt tttctagaaa attatgagaa ttataaacta 4861 aatgaagaac gtaggctaag ctctatgaaa agcaaactat ttcaaaaata attatcatag 4921 cttacggaaa taataatagc gaataacaac aataatgtaa tga