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LOCUS XM_044396172 2488 bp mRNA linear INV 09-DEC-2024 (Ptpmeg2), transcript variant X5, mRNA. ACCESSION XM_044396172 VERSION XM_044396172.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044396172.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2488 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2488 /gene="Ptpmeg2" /note="Protein tyrosine phosphatase Meg2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108068039" CDS 599..2110 /gene="Ptpmeg2" /codon_start=1 /product="tyrosine-protein phosphatase non-receptor type 9 isoform X5" /protein_id="XP_044252107.1" /db_xref="GeneID:108068039" /translation="MTNREDELLANIVGVGVGGGGSGSATNGTTDPAATDTAATTTVG ATIISAVHQLGDNNTTVVTVSNGVGPAGLAGGGAAGAAASAEPNENITINGLSPSHRS SSSSSNATATAANPLKLNTSGAADSSSSNTIAAGAAGGAAGAAAVASNTTTTTTTTNG GGNEFWSENPPSSASSGFSDDDSLAGQEGDPKPIDQIVQMVKQRGRHGLIKEYADIRN RAPEGTFLHARMRANLTKNRYTDVLCYDHSRVVLANEDGDEPSDYINANFVDGYKQKN AYISTQGPLPKTSQDFWRMIWEQHCLVIVMTTRVMERGRVKCGQYWEPTEESSLEFGD YHVRTISVECNEDYMVASLELRNIKTDEIRNVSHWQFTSWPDYGVPSSAMAMLNFLQK VREKQAQLVHGLGDTWAGHARGPPIVVHCSAGIGRTGTFITLDICISRLEDVGTADIR GTVEKIRSQRAYSIQMPDQYVFCHLALIEYAYSRGMLQTVDLAGFDEREQDSE" misc_feature 1211..2023 /gene="Ptpmeg2" /note="catalytic domain of tyrosine-protein phosphatase non-receptor type 9; Region: PTPc-N9; cd14543" /db_xref="CDD:350391" polyA_site 2488 /gene="Ptpmeg2" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tatccgaaga aagacagaca ctccatgcca aggaactacg agcgcgaaag agcggtaaaa 61 ataagataaa gagaggatgt gcatccatcc cattgtgtaa tgtgacaaat cggcaagaat 121 catcatcatc agtcaacaca aaaacaaaaa agaaacaaaa aaaaaacgca acaaaaagtt 181 atgtaaaatt gttcaattga aagtgcacgc aattagcatt taattgtgcg aaccaaacta 241 tatattacaa taaaaatctg aataattaga cagcggcggt ggcggcaaca acaacaacaa 301 caacagcagc agcaacaaca tcgcagtaat caacaacaat ccataacaac gccaacgcgc 361 gactcagggc ggctatccgg cgcgtctaaa gaaggtcctt atcgtgacgg cgccgctttg 421 gttcaaggca cccttcaaga tcctccggct gtttgtgcgc gagaagctgc gcgagcgagt 481 gttcactgta tcggtgcccc agttggcgct gcacgtgccg cgcaaggcgc tgcccattca 541 cttgggtggc acgctggagg tcgatcacgc cacatggttg ctcagctgcc gccaatcgat 601 gacgaatcgt gaggacgagc tgctggcgaa tatcgtgggt gtgggtgtgg gtggaggagg 661 atctggttct gctacaaatg gcacaacgga tcctgcagca acggataccg cggcaacaac 721 aacggtggga gccacgataa tcagtgccgt ccaccagctg ggcgataaca ataccaccgt 781 ggtgacggtc agcaatggag tgggtccagc tggattggca ggaggaggag cagcaggagc 841 agcagcatca gcggagccca acgaaaacat cacaatcaac ggactgagtc ccagccaccg 901 cagtagcagc agcagcagca acgccacagc cacagcggcc aatcccctca agctcaacac 961 gagtggtgcg gcggacagca gtagcagcaa cacaatagca gcaggagcag cgggaggagc 1021 agctggagca gcagcagttg ctagcaatac caccaccaca actacaacca ccaacggagg 1081 aggcaacgag ttctggtcgg agaatccacc cagcagcgcc tcctccggat tcagtgacga 1141 cgacagtctg gccggccagg agggcgatcc caagcccatc gatcagattg tccagatggt 1201 caagcagcgc ggacgccatg ggttgatcaa ggagtacgcg gacatacgga atagggcgcc 1261 cgagggcacc ttcctccatg cgaggatgcg cgccaatctg accaagaatc gctacacaga 1321 cgtcctctgc tacgatcaca gtcgagtggt gctggccaac gaggacggcg acgagccgtc 1381 ggattatata aatgcgaatt tcgtcgatgg ctacaaacag aagaatgcct atatttcaac 1441 tcaaggtcca ttaccaaaga catcccagga cttttggcgc atgatctggg agcaacattg 1501 tttagttata gtgatgacga cgcgcgttat ggagcgcgga cgcgttaaat gcggccagta 1561 ctgggagccg actgaagaaa gttccttaga gtttggcgac taccatgtgc gaacaattag 1621 cgttgagtgc aacgaggact atatggttgc ctcgttggaa ttgagaaaca ttaagactga 1681 cgaaattcgc aatgtctcac attggcagtt caccagctgg ccggactatg gggtgcccag 1741 ctcggccatg gccatgctga actttctgca gaaggtgcgc gagaagcagg cgcagctggt 1801 ccacggactg ggcgacacct gggcgggcca tgcccgcgga ccgcccattg tggtgcactg 1861 cagtgcaggc attggacgta caggcacatt catcaccctg gacatttgca tatcgcgcct 1921 ggaggatgtg ggcacggcgg atatacgcgg cactgtggag aagatccgat cgcagcgcgc 1981 ctactccatc cagatgcccg atcagtatgt gttctgccat ttggccctca tcgagtatgc 2041 ctactcgcgc ggaatgctgc agaccgtcga tctggccggc ttcgatgagc gcgaacagga 2101 ttcggagtag attaggggga gaaaccgata aatggacgag aaaacaactt gtatacagaa 2161 taattttatg ttttaccttt gctaaaaatt ggagttgtaa cctttttcca actagatgtt 2221 cgtcctgata tgatatgata tgatataata tatgatatat gtgtatgatg atgcaaggag 2281 aatggagaat ggattccgga cgaggcgaga cgagagagta gagtaacaaa tttacgttaa 2341 tctattattt tttttttaaa tattattaca taccaagcta tagttgtata gcaaaaacat 2401 ctatatatat aaacattatt taaattaaat ttaaactaaa tgaaaaacaa atagctaaaa 2461 ataaagaaga aacctaaaag aaaaacaa