PREDICTED: Drosophila takahashii C-type lectin domain family 4

LOCUS       XM_044396170            1254 bp    mRNA    linear   INV 09-DEC-2024
            member F-like (LOC123003507), mRNA.
ACCESSION   XM_044396170
VERSION     XM_044396170.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 86% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1254
                     /gene="LOC123003507"
                     /note="C-type lectin domain family 4 member F-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:123003507"
     CDS             1..1254
                     /gene="LOC123003507"
                     /codon_start=1
                     /product="C-type lectin domain family 4 member F-like"
                     /protein_id="XP_044252105.1"
                     /db_xref="GeneID:123003507"
                     /translation="MLKLAYFPVLIFIILEFQGSLANSKNSVCLLKDPPNQCGQFCLT
                     KLHPMIDSIPETNSKLERILGEQQALRTELLEAHRSSLSNNGSERPNMGVRHQLQLLF
                     TKMENLEAQLQTFVKDNRRPHREPQQRALKKEDFEAMLSVTEGHLLVVNSELKSQLKE
                     LLSQKDKHTSLHESLKETFLKRAVEKRLSKTEGQLQLFENKLEAKIQQLHKKTETELL
                     ALQAKIESQHYALEEILFRIHAKNIPPQFQLIGTRYFYIEFSIKRSWYEAAATCRRMG
                     GYLAAFETQEELQAIAGKFGNRGHWFWTGINDLRESRKFMSVASGKPAKVLSWKVGNP
                     SLRNACVVLNDDYMIDTFFNANFALCSCCRNSNCNNRSSNIINCSSGNTAATCNISSH
                     SSNMKNLSSDSNMQQQLEQQQQHET"
     misc_feature    <145..>702
                     /gene="LOC123003507"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; Region: SMC_prok_B; TIGR02168"
                     /db_xref="CDD:274008"
     misc_feature    760..1032
                     /gene="LOC123003507"
                     /note="C-type lectin (CTL)/C-type lectin-like (CTLD)
                     domain; Region: CLECT; cd00037"
                     /db_xref="CDD:153057"
ORIGIN      
        1 atgctgaagc tggcatattt tcctgttctg atctttatta tcctggaatt ccagggatcc
       61 ttggcgaact ccaagaactc cgtttgcctg ctgaaggacc cgccgaatca gtgtggccaa
      121 ttctgcctca ccaagctgca tccgatgatc gattcgattc ccgagaccaa ttccaagctt
      181 gaaaggatcc taggcgagca gcaggctctg aggaccgagc tcctggaggc tcatcggagt
      241 tccttgagta acaacggaag cgaaaggcct aatatggggg taaggcacca acttcagttg
      301 ctgttcacca aaatggagaa tctggaggcc cagctacaaa cctttgtaaa ggacaaccga
      361 aggcctcatc gggagccgca gcagagggcc ttgaaaaaag aggacttcga ggcgatgttg
      421 agtgtgacgg agggtcacct tctggtggtg aattccgagt tgaagagcca gttgaaggag
      481 ctgctaagtc agaaggacaa gcacacctcc ctccacgaat ccctgaagga gaccttcctt
      541 aagagagccg tcgagaagag actaagcaaa acagagggac aactgcagtt gttcgagaac
      601 aaattggagg ccaaaattca gcagcttcat aagaaaaccg aaacggaact tttggccctg
      661 caggcgaaaa tcgagagcca gcattatgcg ctcgaggaga tcctcttcag gatccacgcc
      721 aaaaatatcc ccccgcaatt ccaactaatc ggtacaaggt acttctatat tgagttctcc
      781 attaagcgtt cttggtacga ggctgcggcc acatgtcgtc gaatgggcgg ctatttggct
      841 gccttcgaaa cccaagagga actgcaggcc atcgctggga aattcggaaa tcgggggcac
      901 tggttctgga ccggcatcaa cgacctgcgg gaaagcagga agttcatgag tgtggcctcc
      961 ggaaagcctg ccaaagtcct cagctggaag gtgggaaatc ccagccttcg caatgcctgc
     1021 gttgttctca acgacgatta tatgatcgat acctttttca atgccaattt tgccctgtgt
     1081 agctgctgcc gcaacagcaa ctgtaataat cgcagcagca acataatcaa ctgtagcagt
     1141 ggcaacacgg cagcaacatg caatattagc agccacagca gcaacatgaa gaacctgagc
     1201 agcgacagca acatgcagca gcaactggaa caacagcagc aacatgagac ataa