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LOCUS XM_044396165 3423 bp mRNA linear INV 09-DEC-2024 transcript variant X1, mRNA. ACCESSION XM_044396165 VERSION XM_044396165.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044396165.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3423 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3423 /gene="fog" /note="folded gastrulation; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:108059041" CDS 633..2576 /gene="fog" /codon_start=1 /product="protein folded gastrulation" /protein_id="XP_044252100.1" /db_xref="GeneID:108059041" /translation="MAPPNCLLAVLALTVFLGASDGLPITSRPIEGNVQRMVWEDWVN LDPEQRNLTKEKKVTAKSIFTLPFRHCPQGHTLYNQLCIPQSNIDPTDLIKQELLLAG GTDGNPPPPPIGDYDYGDDVESDEIVYDLSVIPTAMQDGLPPAVGAEDQALPSEDAPL KFNIFEKKFPTGTGEPEELPLPPATQASNSNSSTTASSPAGAASTTPAAPSGEASGRI AGGDLQAAPSNALSTSTNLTHSNRDIGQVEAIVLPAGQAQDGAVQLVTSSLTDSNNDY SSSTATAFSAEADLDQLLKADAFLPAYDGSIELLPPLFSHRKVSPPLSADQDVQTKQP DEEEEEESTTDIVPSGEEEYTTESTSTDADDTTVAEASMDTASTSSQTSPHPPEEPET DEGENRLVLIKSKVQPVQLTTTTSATATSTTAADAADSSSSTDRFHYQYFVEEVAASS TTATPEPSSSELIAQSDNDNLMTNTIGGHASEIDDQQELRLINELVKGMQRKQQQQQL EPTGAEGTSTSTPAPKSTEDATVTTAATYTNWSKVMPQLGQGASEAGTSTETAATSSQ AESAAATLSSITNRSNRNSKIIRVEGPAATPPNQDGYTPFWWLPSIGWRLERQVDGRG EDQSLLLRFFSTFRGSDAAAGTR" misc_feature 804..1130 /gene="fog" /note="Folded gastrulation N-terminus; Region: FOG_N; pfam15888" /db_xref="CDD:464925" polyA_site 3423 /gene="fog" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 attagaacta tcttaaatcg atttttttgt agtgattttt tgtatgtgtg aaaaagtctt 61 ctttgtgaat caaaaacata tgatactgtt aaacaaataa cacaaatgaa aacggagaaa 121 tatataaaaa cagtgtattg tttaagagac agacacaaca ctaaacaaag tgataaatca 181 gcagtggaaa atgaaaggtc cagccaaccg caccaacaaa atatataaaa cattctaaaa 241 aaagaaaacc aacaacgtca ctaaatacca atttgtggtg tttaatattt atttatatgc 301 taatttattt ttataataaa ttggtattaa cccacaaacc aacacgacaa cattaaaatc 361 gggtgaaaga taataaagaa gcaacaaaaa gcaagcacgc gcatcttctt ttgccgtctt 421 tgttttggga tataaaaccg gaaataatta ccccaacact cagcaaaaac aaccgaaaac 481 gaagaagtat tgtgcatcct gtgaaaagat tgtctgccag attggaaagg acttttttta 541 cattgcctct cgcccacttc atatatcatt tgactttatg tggcctgatt tgggcgctga 601 ccaggagtaa gtgagcgatc gatcccgaag agatggcccc gcccaactgc ctgctggcgg 661 tgctggcgct aacggttttc ctgggggcca gcgacggcct gccgatcacc tcgcgcccca 721 tcgagggcaa cgtccagcgg atggtctggg aggactgggt gaacctggac ccggagcagc 781 ggaacctgac caaggagaag aaggtgaccg ccaagtcgat attcacgctg cccttccgcc 841 actgtccgca ggggcacacg ctgtacaacc agctctgcat cccccagtcc aacatcgatc 901 ccacggacct catcaagcag gagctcctcc tggccggcgg cacggacggc aatcccccgc 961 cgccgcccat cggagactac gactacggcg acgacgtgga gagcgacgag atcgtgtacg 1021 acctgtcggt catacccact gccatgcagg acggcttgcc gcccgccgtt ggagctgagg 1081 atcaggccct gcccagcgag gatgcgccgc tgaaattcaa tattttcgag aagaaattcc 1141 ccacgggcac gggtgagccc gaggagctgc ccctgccgcc ggcaacgcag gccagcaaca 1201 gcaacagcag caccacagca tcatcaccag caggagcagc atcaacgaca ccagctgctc 1261 cctcggggga ggccagtggc cgcattgctg gcggggactt gcaggcggct cccagcaatg 1321 ccctgtccac atcgacaaat ctcacacaca gcaacaggga cattggccag gtggaggcca 1381 tcgtgttgcc ggcgggtcag gcgcaggatg gcgctgtcca gctggtgacc agctccctca 1441 ccgatagcaa caacgactat tcctccagca cagcgactgc attcagtgcg gaggcggatc 1501 tggaccagct gctcaaggca gacgcctttc tgccggccta cgacggcagc atagagctgt 1561 tgccgccgct tttcagccat cgcaaggtgt cgccgccgtt gagcgcagac caggatgtac 1621 agaccaagca gccagatgag gaggaggagg aggagagcac cacggatata gtgccaagtg 1681 gggaggagga gtacaccact gagtcgacga gcacagatgc agacgacaca acggttgcgg 1741 aggcgtcgat ggataccgcc tccacctcta gccaaacatc accacatccg ccagaagaac 1801 ccgagacgga tgaaggtgaa aatcgcctgg tattgataaa atcgaaagtg caaccggttc 1861 agctgacgac aacaacatcg gccacggcaa catcaacaac tgcagctgat gctgctgact 1921 cgagctcctc cactgaccgg tttcattatc agtattttgt agaagaagtt gccgctagca 1981 gcacgacagc aacgccagag cccagcagca gcgaactgat cgcgcagagt gacaatgaca 2041 atttaatgac aaatacaatt ggcggccacg ccagtgaaat tgatgaccaa caggagctgc 2101 ggctcatcaa cgagctggtg aagggcatgc agcgcaagca gcaacagcag cagcttgagc 2161 caaccggcgc agaaggaaca tccacatcca caccagcacc gaaatcaact gaggatgcca 2221 ccgtcacaac agcagcaacc tacacaaatt ggtcaaaggt gatgccgcaa ttaggccagg 2281 gcgcaagtga ggcaggaacc agcacagaga cagcagcaac atcgagccag gccgaatcag 2341 cggcagcaac actatcaagt attactaatc gtagcaatag gaatagcaaa ataataagag 2401 tagaagggcc agcagcaaca cctccgaacc aggacggcta cacgcccttc tggtggctcc 2461 cgagcatcgg ttggcgtctg gagcgccagg tggacggccg cggcgaggat cagtcgctgt 2521 tgctgcggtt cttcagcaca tttcgcggca gcgacgcggc agcaggcact cgctaacggc 2581 aacaccaaag gcagcagcag caactcctgg ctctggccac cgactagagc cacaggacgt 2641 cgctgggtgc cgcccagtct agtgtaagat atgtagtgtc gtgtcagcaa caccgtttca 2701 attgcatgtt gaagtttgtt catagttgtc tcacctttac actcatccct tgtctgagta 2761 aatatttatt gccttttaat gttttaattg aatgccaaat tgtacatagc acatccgaaa 2821 ctcactactt agcaacaact tttgctttat ttttgtttgc ccgggcattt tttttttgtg 2881 gtatttaaac tgatttcttt ttttaagttg ttgatttaat tttaggggga cttttttttt 2941 acattacaat agttttatat gtgcgtgctg ctgtcgttgt tgcgagccct agcaatatta 3001 attgtgatta cttaggatta agaattgatt gttagactta ggccaatgta tatgtatact 3061 ctgaatcttt cgatgtatct ttttttttat attatcatca cacttatcca atatatatat 3121 gtatatgtaa tatcggagga cctgttgtag ctgtctctgt gtatatacgt tagtgcaaaa 3181 gccattcaaa ccgaagcatt ttcaaacgca ttcagtgaaa aacacacgtg tttctatccc 3241 tgtattgtaa gcccaatagt tgtgaaacca ctgtaaacag atatcaaaac taaagcatag 3301 aaaatagtgt aatgcatgtg tatagttgta gaaaaggcga ttcaggcgaa cggcgtgttt 3361 ttgtcaatga aattcaacca acaaccaaag ttctgaagaa aaacaaatgc ggaaatgcaa 3421 aaa