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LOCUS XM_044396158 5777 bp mRNA linear INV 09-DEC-2024 variant X2, mRNA. ACCESSION XM_044396158 VERSION XM_044396158.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044396158.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5777 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5777 /gene="kek5" /note="kekkon 5; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108066881" CDS 838..3594 /gene="kek5" /codon_start=1 /product="leucine-rich repeat-containing protein 24" /protein_id="XP_044252093.1" /db_xref="GeneID:108066881" /translation="MMARRLGILLLLLLPLAAGTSDWMQSCGPCHCHWNSGKKSADCK NKALTKIPLDMSNEMQVLDFAHNQIPELRREEFLLAGLPNVHKVYLRNCTIQEVHREA FKGLHILIELDMSGNRIRELHPGTFAGLEKLRNVIINNNEIEVLPNHLFVNLSYLSRI EFRNNRLRQVQLHVFAGTVALSAISLEQNRLAHLHRETFRDLQKLMHLSLQGNAWNCS CELQDFRDFAINKRLYTPPTDCQEPPQLRGKLWSEVPSENFACRPRILGSVRSFVEAN HDNISLPCRIVGSPRPNVTWVYNKRPLQQYDPRVRVLTSVEPMAAESQSSVLTSELRI VGVRASDKGAYTCVADNRGGRAEAEFQLLVSGDYAGAVSSSDGMGLGGMGAIGAPTID PQTNVFLIICLITTTLLLLLIVVVLALFWYCRRIKTYQKDTTMMSGDGLISSKLDKTH NGSMLEGSVIMEMQKSLLNEVNPVEKPPRRTDIESVDGGDDVLEIKKTLLDDTVYVAN HSRDEEAHSVALSDTTTTPRSRHTYVDDAYANSLPPDLLAFPARVPPTSPSMQSSQSN IPDQVIYGIRSPPSLTSPVYTHMTPHGIYGTKTLTAPHNGFMTLQHPKSRNLALIATA NSSRQHQHQLNHQQQQLQLNHQQQQQHLLQQQQQHPLATTSPFLPAPVVYSPATGVVM KQGYMTIPRKPRAPSWAPSTSGGATGGGTIQLSEFQSPTSPNPSETGTATTAELQAEP VYDNLGLRTTAGGNSTLNLNKIAGGSSNSGSQAAGQQYSMRDRPLPATPSLTSVNSAN NAANASKIYEPIHELIQQQQQQLQQQQRLSSLDTEPLYGVRHQGITILPGSSISGAGL AYISPVPSAVSPSHAGDSPKLAKIPPRPPPKPKKKMSVTTTRSGQGSTSQLFDDEGED GTEV" misc_feature <1015..>1476 /gene="kek5" /note="Leucine-rich repeat (LRR) protein [Transcription]; Region: LRR; COG4886" /db_xref="CDD:443914" misc_feature 1015..1089 /gene="kek5" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1090..1161 /gene="kek5" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1162..1233 /gene="kek5" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1234..1305 /gene="kek5" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1306..1377 /gene="kek5" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1378..1449 /gene="kek5" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1474..1620 /gene="kek5" /note="Leucine rich repeat C-terminal domain; Region: LRRCT; smart00082" /db_xref="CDD:214507" misc_feature 1675..1929 /gene="kek5" /note="Immunoglobulin domain; Region: Ig; cl11960" /db_xref="CDD:472250" misc_feature 1675..1689 /gene="kek5" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:409570" misc_feature 1714..1728 /gene="kek5" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:409570" misc_feature 1810..1839 /gene="kek5" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:409570" misc_feature 1867..1884 /gene="kek5" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:409570" misc_feature 1906..1917 /gene="kek5" /note="Ig strand G [structural motif]; Region: Ig strand G" /db_xref="CDD:409570" polyA_site 5777 /gene="kek5" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ccgcaaaaag tctgcttcaa aaacactaat gattatttct ctaaaatgga ttgtaaaagg 61 atatatgtta tgtggagaag aggcaaatgg attggattgg tttcactatt tatacgctat 121 atcggctatc gtcgatgtca taagttgttt gcttaatgat tggaattaaa taaaaaacta 181 tattactact tgaaatgctg agctgctcca acattaataa ggttgtcgtc gtcgtcagca 241 gcagcagcca atcgtcatgg tccttcgagc cttcgagcat aaacattgaa aacaagcata 301 aaaacaaccg agacacgtga agcaacgaaa aagaaaaaaa actgaaactg aaaaaggacc 361 aaggacgaag gatagttccg ccggcactct tggaacttgt ttttgaaggg aaacctgatt 421 accaggttct tgttaaatgg gtaaaaacat cagcaggagc aggagaagca cggctatttg 481 cgagcttaga gcccaccact gtccgccggg acgacgggac attaattaat cacggccttg 541 tcattcgcaa ggatcaagga gtggcacagc gaacgaacga aggaagaaaa aaacaacaca 601 agccgaaaga gaagccgaag cgaagggtgc agaaatcaaa ttaacagtgc gtcaaaagga 661 ttaaccccga aaaagggcag gagtttagtt tagagcacgt acacaggacg cggcgaggcg 721 agtaaagagc cccggactac cggaatcccg accacttggt ggcacgtgtt cggtggctcg 781 ttgtcgcgga ttataaacaa atcccgatac acagaaccca gaacccaaaa ccaagctatg 841 atggccagac gactggggat tctcctactc ctcctcctcc ccttagcagc tgggacatcc 901 gactggatgc agagctgcgg cccctgccat tgccactgga attcgggtaa aaagagcgcc 961 gattgcaaga acaaggcgct gacaaagatt cccctggaca tgagcaacga gatgcaggtg 1021 ctggactttg cccacaacca aatacccgag ctgcggcgcg aggagttcct cctggccggt 1081 ttgcccaatg tgcacaaggt ctatctgcgc aactgcacca tccaggaggt gcatcgcgag 1141 gccttcaagg gtctgcacat cctgatcgag ctggatatgt cgggcaatcg gataagggaa 1201 ctccatccgg gcacgttcgc tggcctcgag aagctgcgca acgtgataat caacaacaat 1261 gagattgaag tgctgccgaa tcacctgttc gtcaatctca gctacctttc acgcatcgag 1321 tttcgaaaca atcgactgcg gcaagtgcaa ctgcatgtgt ttgccggcac ggtggcgctg 1381 agcgccattt cgctggagca gaatcgattg gcccatttgc atcgggagac attccgggat 1441 ctgcagaagc tgatgcattt gtcgctgcag ggcaatgcgt ggaactgcag ctgcgagctg 1501 caggatttcc gggactttgc gatcaacaag cgtctgtata cgccgcccac cgactgccag 1561 gagccgccgc agctgcgtgg caagctgtgg agtgaggtgc cctctgagaa ctttgcctgc 1621 cggccacgca tcctgggctc cgtgcgatcc tttgtggagg cgaatcatga caacatctcg 1681 ctgccctgcc gcattgtcgg cagtccgcgg ccgaatgtca cctgggtgta caacaagcgg 1741 ccgctgcagc agtacgatcc ccgggtgcga gtcctcacct ccgtggagcc gatggcggcg 1801 gagtcccagt cctcggttct cacctcggag ctgcgcatcg tgggcgtgcg ggcctcggac 1861 aagggagcct acacctgtgt ggccgacaat cggggaggaa gagcggaggc ggagttccaa 1921 ttgctcgtca gcggcgatta tgccggcgcc gtatcctcgt ccgatggcat gggattgggc 1981 ggcatgggtg ccattggagc gcccaccatt gatccgcaaa cgaatgtgtt cctgatcatc 2041 tgcctgatta ccacgacact gctgctactc ctgattgtcg tggtgctggc cttgttctgg 2101 tattgccgaa ggattaagac ctaccagaag gacaccacca tgatgagcgg cgatgggctg 2161 atctcgtcca agctggacaa gacgcacaac ggctccatgc tcgagggctc cgtcattatg 2221 gagatgcaga agagcctgct caacgaggtc aatcccgtcg agaagccgcc acggcgcacg 2281 gacatcgaga gcgtggacgg cggcgacgat gtgctcgaga ttaagaagac gctgctcgac 2341 gacacggttt atgtggccaa ccactcgcgg gacgaagaag cccactcggt ggccctctcg 2401 gacacgacga ccacgccccg atcgcgacac acctacgtgg acgacgccta cgccaatagc 2461 ttgccgccgg acctgctggc cttccccgcc cgcgtgccgc ccacctcgcc ctcgatgcag 2521 tcctcgcagt cgaacatccc cgaccaggtg atctacggca tccgctcgcc gccctcgctg 2581 accagtcccg tctacacgca catgacgccg cacggcatct acggcaccaa gacgctcaca 2641 gctccgcaca atggcttcat gacgctgcag catccaaagt cgaggaacct cgccttgatt 2701 gccaccgcca acagtagtcg ccagcatcag catcagctga atcatcagca gcagcagctg 2761 cagctgaatc accagcagca gcagcagcat ctcctccagc aacagcagca gcatccgctg 2821 gccaccacat cgcccttcct gcccgccccc gtcgtttact cgccggccac gggcgtggtc 2881 atgaaacagg gctacatgac cataccgcgc aagccgcgag cacctagctg ggcgcccagc 2941 acctcgggtg gagccacagg cggaggaacc atccagttga gcgaattcca gagccccaca 3001 tcgccgaatc ccagcgaaac aggcactgcc accaccgcgg aacttcaggc ggagcccgtt 3061 tacgacaatc tggggctgcg caccacagcc ggcggtaatt caacattaaa tctaaacaag 3121 atcgcgggtg gaagttctaa ttccggctcc caagccgcag gtcagcagta ctcgatgcgg 3181 gatcgtccgc tgccggccac gcccagtttg acgtcggtga actcggcgaa caatgcggcg 3241 aatgccagca agatatacga gcccatacac gagctaatac agcagcagca gcagcagttg 3301 cagcagcagc aaaggctaag ctccttggac acggagccgc tgtacggtgt gcggcaccag 3361 gggatcacga tactgcccgg ttcgagtatc agtggggcag gattggccta tatatcgccc 3421 gttccgtcgg ctgtttcgcc cagccatgcc ggtgactcgc cgaagctggc caagattcca 3481 ccgcgaccac cgccgaagcc caagaagaag atgtccgtga cgacgacgcg cagcggtcag 3541 ggcagcacca gccagctctt cgatgacgag ggcgaggatg gcaccgaggt ctagtttggc 3601 acctagtttg gatgatatga gagtggagga aacggaatgg taacttggag atgcagcaaa 3661 atataacatc aacatccgct gttgcggctt gtaaaaatag ccgacagaag taaggattct 3721 atactgttct gttccgtggt tcacgccact gcgtgacttg tgtgccaaac gactgatgta 3781 ggttttagta attaaatcga tgaacatgca acacaacaga agtcttcgga tgcaaataaa 3841 cagaagacag aagacagaag agagactcca atcccttagg gcgaattgaa atcgctttta 3901 gaacagaaca accatctcta atcccaaatt cgtatttgcg gaaatacgta aaaacaccca 3961 atttttaaat atataccacc tttttttgtg tagactatag ttagtttggt acaaaatgca 4021 ttattcgtat atagagagac atatatatac acgcaatttt aaagattata tataaacaag 4081 aaatatccta taatgaaaaa aaataatata tacaaaaatc cattttcaaa tcaacgacag 4141 tttatttaag tgcaaaaatt taaaaaaaca aaaacaaaaa cataattttt caaaattttg 4201 caaaatttta taaaattgta aatgtcaaat gcatacagtt aatcgcatta agctatatat 4261 aaaataatta catatatata tatatatata tactttgcgt aagaacaacc acaaaataca 4321 tccttaattt ttttttttgt tttacgaaag ccaccacgaa tcgggaaatg aactaaacac 4381 gaaagtatat ttgatagcgg gtaagtttgt taagtgcatt agagcgttag ggtaaagata 4441 atgataaaga gtttgcattc gcaattaaaa caatgaattg aaacttctat gtatacatat 4501 agtctagaaa gaaggcagaa aggcggcagc ataagtgcat aagtgcagct ataataacga 4561 ttgtactagt tataaaaaaa aaatatatat ataaaataaa tctgtatgta catggactta 4621 cgtatgacat tctaggcatt aagtacacaa attaaaaaag aacagaaaca taaacagaag 4681 aagaaaagtt ataagcaggc catatatgta cgtatgtctg agaataccct tgaaattacc 4741 ttcacccctt cacacacgac tcatttaata tccaaacaaa atatatatac aaggcattta 4801 gcagcaatca ttctaaatac atgataacga atatagacca ttaaagatta aagacaacaa 4861 caaagtatcg ttaagagaaa tgaaattata aaaataaata tcggataatt cagcatgcta 4921 gctattagct accctcagta gttaaagatc agatatcaga tgattcacct accaaaacct 4981 taccatacct tacctaccaa tcaaacaaac tatataccat aatttttttt atattattta 5041 tattaattgt acttttaatt tcctgcacca cctgcaccac catataggcg atctatgcat 5101 ctggatgcat ttttatttaa taaaaatgca ctttcaggca ctgccaaact actttatttc 5161 ataagtgtga acaggaaata gaaaaaaaaa taaaatatta aataatatat gatttcctgt 5221 taaaggcgaa ggcgaaggcg aaggcaggcc tagaaatgat ctgagagtta aataatagat 5281 gagacatgta aagttttcag ccccatactt gcccctagaa aaaacattat tcgattcgac 5341 ttagggtgca atgatttcat aaacaaaatc aacagaataa atgtacccaa tccacaattg 5401 gttttaaatt aaagtaagca aaagtattac ataaataata agttacctta cgttaatttt 5461 attgtgctgg tttttttttg tattcagcgt ttttacacag taattatttg tagaattttc 5521 tttacaattt ggacaagcgc gcaacataat tgtaataaat atctcggaaa cgcaaaaaac 5581 atttctaaaa cctcgaaaaa accataaaaa tgacgttgcg aacaaattgt tcaaattagc 5641 tcaaaatcaa aacaattata attaaaaatt gtaatctaat tgtaattgat agaagggttc 5701 ttatatatac gttttttata attttgcata atttgcctaa catataaaat attgaaataa 5761 actatgaata aaacgaa