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PREDICTED: Drosophila takahashii Mucin related 11Da (Mur11Da),


LOCUS       XM_044396131            1974 bp    mRNA    linear   INV 09-DEC-2024
            mRNA.
ACCESSION   XM_044396131
VERSION     XM_044396131.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq; corrected model.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1974
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1974
                     /gene="Mur11Da"
                     /note="Mucin related 11Da; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:108056433"
     CDS             1..1974
                     /gene="Mur11Da"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /codon_start=1
                     /transl_except=(pos:1657..1659,aa:OTHER)
                     /product="LOW QUALITY PROTEIN: uncharacterized protein
                     Mur11Da"
                     /protein_id="XP_044252066.1"
                     /db_xref="GeneID:108056433"
                     /translation="MWRVFACLVLMSALTFAQGRREDYPGFPRFKNIPRYNQRPCGPR
                     VCGKSGLCYRGFESICDLNEYNLKMIFSGQEEFDLTDLIYCQEPPPRPKIVDVGYYYN
                     QRSLLVAQPPRSTYSSPIPRPRISQIPQYIGRYDVMPPPDTYGPQAIDYVLPYPVWAL
                     KRPQTPPRRNPVSYRPPYWHYPTRRPETTKRPCYEETTTTTKAPISTKAPEYLTTTTT
                     SQPSTSTTTTEPSTTTNTASSTTTSTEASTTTTTTEASTTTTTERTTTTTPEPITTTT
                     TEPTTTTTEQTTEPTTTTEPTTTTKLTTTTDPSTTTSQDPSTTTTKDTTPSTTTDSST
                     ETTTDPSTTVTTESTTTTERSETSTTTTIDPSTTTTTVPFTTTTTTDPSTTTTTDPST
                     TTTTDPSTTTTTVPSTTTTSVPSTTTTTTESFTTTTSDPTTTTESSTTTTTAPSTTTT
                     TVPSTTTTTVASTTTTTIPSTTSTTASSTTTTTDPTTISSTTATTESSTTTTTTNPTT
                     VLSTTTTTTDPTTISTTDPPTTSTTTEASTTSTTAASVSRTLNPXQIKRFSIEVRDEE
                     GRLLDFVLADAIEPGCTEITNVLITTGSRVVFEFSGCIVPKTSTKTLSEATTTTSTTT
                     TTTTGPTTTQGTPYYQWFGQSSNYAQSHVIYTY"
ORIGIN      
        1 atgtggagag tgtttgcctg tttggtcctg atgtcagctt tgaccttcgc ccagggtcgt
       61 cgagaggatt acccgggatt tccgcgcttc aaaaacattc ccagatataa ccaacgaccc
      121 tgcggccccc gagtctgtgg caaaagtgga ctttgttatc gtggttttga gagcatttgc
      181 gacctcaacg agtataatct aaagatgata ttcagtggac aggaagaatt cgatttgact
      241 gaccttattt attgccaaga gccaccgccg cggccaaaga ttgtagatgt gggctactat
      301 tataatcaac gaagtttgct tgtggctcaa ccacctcgct cgacttactc atcacccatt
      361 cccagaccca gaatttcaca aattccgcaa tatatcggac gttacgacgt aatgccgcca
      421 ccggatactt atggtcctca agcaatagac tatgtgcttc cgtatccggt atgggctctt
      481 aagcggcccc aaacaccacc cagaaggaac ccagtgagct ataggcctcc atattggcac
      541 tatccgacca ggaggcccga aacaaccaag cggccatgtt atgaggaaac tacaaccacc
      601 acaaaggctc ctatatcaac gaaagcccct gaatatttaa caaccaccac aacatctcaa
      661 ccctctacat cgacgaccac aactgaacct tcaacaacta caaatacggc atcatccacg
      721 acaactagca ctgaagcttc tacaacaaca actaccactg aagcttctac aacaacaacc
      781 acggagagaa ctacgacaac tacccctgag ccaataacaa cgacaacaac agagcctaca
      841 acgacaacta cagaacaaac aacagagcca acaacaacca ctgagccaac aacaaccact
      901 aaattgacaa cgaccacaga cccatcaacg acaacttccc aagacccctc cactacgaca
      961 acgaaagata caacaccatc aacaaccaca gattcttcta cagaaacgac tacggatccg
     1021 tcgacaacgg taacaacaga atcaacaaca acgacagaac gttcagaaac ttccactaca
     1081 acaacgatcg acccttcaac aacaacaacg accgttcctt ttacaacaac aacaacaacc
     1141 gatccttcta caacaacaac aaccgatcct tctacaacaa caacaaccga tccttctaca
     1201 acaacaacga ccgttccttc cacaacaaca acgtccgttc cttctacaac aacaacaacc
     1261 acagagtctt ttacaacgac aacaagtgat ccaacaacaa ctacagaatc ttctacaaca
     1321 acaacgaccg ctccttccac aacaacaacg accgttcctt ccacaacaac aacgaccgtt
     1381 gcttccacaa caacaacgac catcccttct acaacatcaa ctacagcgtc gtccacaacg
     1441 acaacgacgg atccaacaac gatatcttct acaacagcaa ccacagagtc ttctacaaca
     1501 acaacgacga ctaatcccac cacagtttta tctacaacaa caacaacaac agacccaaca
     1561 acgatatcaa ctacggatcc ccctacgaca tcaacaacaa cggaagcctc aaccacttca
     1621 accactgcgg cgtctgtaag tagaacatta aatccatgac agattaaacg attctctatt
     1681 gaagtcagag atgaagaggg acgcttacta gacttcgttt tagcagatgc gatagagcca
     1741 ggctgcacgg agatcactaa tgtcctgata accacaggat caagagtcgt ctttgagttc
     1801 tcagggtgca ttgtgccaaa gacttctaca aagaccctca gtgaagccac caccaccact
     1861 tccactacca ctaccacaac cactgggcca acaaccaccc agggaactcc gtactaccag
     1921 tggtttggcc aatcctcgaa ctacgctcaa tcccatgtca tttataccta ttag