Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_044396125 4575 bp mRNA linear INV 09-DEC-2024 transcript variant X4, mRNA. ACCESSION XM_044396125 VERSION XM_044396125.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044396125.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4575 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4575 /gene="NFAT" /note="NFAT nuclear factor; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108070182" CDS 629..4279 /gene="NFAT" /codon_start=1 /product="nuclear factor of activated T-cells 5 isoform X4" /protein_id="XP_044252060.1" /db_xref="GeneID:108070182" /translation="MLLKFTKTSGAGPSAVPLLPPNPSPGSSSSLQATTTTYAARGTG MRMTMSTNSTMSARIHRKGFRIPSKRQPGKGLPGKLHTITRAGPGKIVPGKRIPQRPH PPPCDNSNDSGLGFDQHTELRSSGGGGGGGVADPAVNGGGSGANSAQRSNLLVNSALT NTVAAAAAAAAAAVASNTLQQHQQHHQQQQQQQQQQQQQQQQQQQQQQQQHSPQQHLI RAIPVSRFISARTVTRVANKRQPTTPLNSIASSNDGQVQLEIVSQPEQQHRARYQTEG SRGAVKDRSGNGFPIVRLAGYDKGAVLQVFIGTDIGRVAPHMFYQACKVAGKNSTQCN EKKVDGTMVIEIDFKPETDMTVTCDCVGILKERNVDVEHRFPEHLAQKNKKKSTRCRM VFRTQLTRDDGTTETLQVCSNPIICTQPPGVPEICKKSLNSCPVDGGLELFIIGKNFL KDTHVVFQETYDSVNGDDPATEIAVRQQLIGGTAALWEQSVLPDKEYLHQTHLICTVP PYLHQSILKPVQVQVSIVSSGKKSEPHTFTYTPKGQYTTLAAASTLSNTIHAQDVSGF MDTTAASASSGSSSGGPWSGPAANPGDNVEAKHEIDSGMMPPPITTQIPMGVRRSSLP SVTPMITDQQLVHLSAVASAEALKTELLDDGNSHSPLTGESTPDSPNAALQYHRFAHR KPSLDTIMYDQSNSLPGFPAVVAPATAAAVAAAVDIDPAAVAVAVELAVKNEIVKHVV QQHQQMQEQMQEQQQQQQQQQQQQQQQQQQQQPQQQQQQQQQQQVHKFIDELTKSTSV VTSNGTSEPALFTTSAVIDHALTDILQAKVGIAPPNVVLERSLSLSSTNSNSSMSGGS ESSPNSSPLTQDIILNSEPAAALAGAAALGGPAPVDVVTGGLSTDIIMNPAVSPSTIL CSANGAATAVVPNILAPHQVTMANSILNDIAMQPEPTQQDAAVAALALSNIMMSPPTA VVASGVGVVDTLPPTPAAMQPEVAATATSTAVSNMIIKAAADFITTQEQEQEQHNYHH RVHSHSPQAAVGVSGNPAETASDPLVNLLLNHSSTPETAAAAAAAVAVEAANFQSMGH SHHAMNHSHHGHSHSHPHSHSHGHHHGHHHGHHLPVVPPTPQESLIVALASENALQKS VATAAVTTNGAVMTQQASAPNTAGSILPAAVGAVAAAAAVAVQPPIPQELTTMSDQDL ISYINPSTFDQL" misc_feature 1394..1885 /gene="NFAT" /note="N-terminal sub-domain of the Rel homology domain (RHD) of tonicity-responsive enhancer binding protein (TonEBP); Region: RHD-n_TonEBP; cd07882" /db_xref="CDD:143642" misc_feature order(1433..1435,1442..1444,1448..1465,1721..1723, 1727..1732,1784..1786,1790..1792,1883..1885) /gene="NFAT" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:143642" misc_feature 1895..2251 /gene="NFAT" /note="Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor...; Region: IPT; cl15674" /db_xref="CDD:472823" polyA_site 4575 /gene="NFAT" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aggtctggca tccctgcgca acaagttgaa gaatagaaga agacaaatag aaacagcgtc 61 cgcaaatagt gcgcaaaata gtgttttttt gttaacgtgc aacagcgaca ttgtcaaccc 121 agtggagcgg tgaatgcaag tgatagtgcg accgaaaaaa caatgccaaa cacttgacca 181 cgcagcaaaa acaattgagc aaggcacaca ccacacgcac acatgtgcag gcacccactc 241 gtgtaagaga gagcgagagc gcgagtgtgt gagtgagtga gaggcaagaa ctgtaactgt 301 aatataattg ataaaacaaa aaacgtcagg agcaggaatc cagtgtgcga gagggagaga 361 gagagaacga gtgagcagag ggacagggag acggcgaaag agagagcaga aaaggaggag 421 gaattgttgt tgctaaaaat agcaacaaat agacaggcga ataagaagca gagcaagaag 481 aagaagacga agcgttgacg caggcaaaaa gccaaagcct tttggccact tggactccca 541 atttgtcccg ttagccaagc caacaactaa acatcgataa taacaataac aacaactaca 601 acatcaacaa agacgtcgga ccaaaactat gcttttgaaa ttcacaaaaa ccagtggcgc 661 tggaccctcg gccgtaccgc tgctgccccc caacccctcg ccgggctcca gttcgtcgct 721 gcaggcaaca acaacaacgt acgcggcccg cggaacaggc atgaggatga ccatgtccac 781 gaattccaca atgagtgcgc gaatacatcg gaagggattt cgcataccat cgaaaagaca 841 gccgggtaag ggattgcccg gcaagttgca taccatcacc agggcgggtc ccggaaagat 901 agttcctggg aagcgaatac cacaacgacc ccatccgccg ccctgcgaca actccaacga 961 cagtggcctt ggcttcgatc agcacacgga gctgaggtcc tcgggcggag gcgggggcgg 1021 gggcgtggcc gatcctgcgg tcaatggagg aggcagtggc gccaactccg cccagcggtc 1081 caacttgctg gtcaatagcg ctctaaccaa cacagtggct gctgcggcag ccgcggcagc 1141 tgctgcagtg gccagcaaca cgttgcagca acatcagcag caccaccagc aacagcagca 1201 gcaacagcag cagcagcaac aacagcagca acagcagcag caacaacaac agcagcaaca 1261 ttcaccgcag cagcatttaa tacgagcgat acctgtatca agattcatat cggccaggac 1321 tgtcacccgg gtggccaaca agcggcagcc gacgacgccg ctgaacagca tcgccagctc 1381 caacgacggc caggtgcagc tggagatcgt ctcgcagccg gagcagcagc accgggcccg 1441 ctaccagacg gagggcagcc ggggagccgt caaggatcgc agcggcaacg gattccccat 1501 cgttcggctc gccggctacg acaagggcgc cgttctgcag gtcttcatcg gcaccgacat 1561 tggccgcgtg gcaccgcaca tgttctatca ggcctgcaag gtcgccggca agaactcgac 1621 gcagtgcaac gagaagaagg tcgacggcac catggtcatc gagatcgatt tcaagcccga 1681 aacggacatg accgtcacct gcgattgcgt tggcatcttg aaggaacgca atgtggatgt 1741 ggagcaccgg tttccggagc atctggcgca gaagaacaag aagaagtcga cccgctgccg 1801 catggtgttc cgcactcagc tgacccgcga cgatggcacc accgagaccc tgcaggtctg 1861 ctcgaatccc atcatctgca ctcaaccacc tggcgtaccg gagatatgca agaaatcatt 1921 gaactcgtgt cccgttgacg gcggcctcga gctattcatc atcggcaaga acttcctgaa 1981 ggacacgcac gtggtgttcc aggagaccta cgacagcgtc aatggcgacg atccggccac 2041 cgagatagca gtgcgccagc agctcatcgg cgggaccgcc gccctttggg agcagagcgt 2101 tctgccggac aaggagtatc tccaccagac ccatttgatt tgcaccgtgc cgccgtatct 2161 gcaccagagc atcctgaagc ccgtccaggt gcaggtctcc attgtctcga gcggcaagaa 2221 gagcgagccg cacacgttca cctacacgcc caagggacag tacacgacgc tggcggcggc 2281 cagcacgtta agtaacacaa tccacgccca agatgtgagc ggtttcatgg acaccaccgc 2341 ggcgtccgct tcgagtggct cctcctctgg tggcccctgg agcggtccag ccgccaatcc 2401 cggcgacaat gtggaggcca agcacgagat cgactcggga atgatgccgc cgccgatcac 2461 cacccagata ccgatgggcg tgcgccgctc ctcgctgccc agcgtgacgc ccatgatcac 2521 ggaccagcag ctggtccacc tgagtgcggt ggccagtgcg gaggcgctga agacggagct 2581 cctggacgac ggcaattcgc atagtcccct gacaggggaa tccacgccgg atagtccgaa 2641 tgcagcgctg cagtatcatc gctttgccca tcgaaagccc agcctggata ccatcatgta 2701 cgatcagtcc aacagcttgc ccggtttccc ggccgtcgtg gctcccgcaa cagcagccgc 2761 tgtggccgcc gccgtggata tcgatcccgc tgccgtcgcc gtggccgtgg aactggccgt 2821 caagaacgag attgtcaagc atgtggtgca gcagcatcag cagatgcagg agcaaatgca 2881 ggagcagcag cagcagcagc aacagcagca acagcagcag caacagcagc agcagcagca 2941 gcaaccccag cagcaacagc aacagcagca gcagcaacag gtgcacaaat tcatcgatga 3001 gctgaccaaa tccacttcag tggtcaccag caatggcacc agtgaaccgg cgctcttcac 3061 cacctcggcg gtgattgatc acgccctcac cgatattctg caggccaagg tgggcattgc 3121 accgccgaat gtggtgctcg agaggagcct atccctgagc tccacaaact ctaacagttc 3181 aatgagcggc ggcagcgaga gttcgcccaa cagttcgccg ctcacccagg atatcatact 3241 caattcagag cccgccgcag ctctcgccgg agcagctgcc ttgggcggac cggcgcccgt 3301 ggatgtggtg accggtggcc tgtccaccga catcatcatg aatcccgccg tctcgccctc 3361 gacgattctg tgctcggcca atggagcagc tactgcggtg gtgcctaata tcctggctcc 3421 ccaccaggtg accatggcca attcgatact gaacgacatt gccatgcagc cggagcccac 3481 gcagcaggat gcagcggtgg ccgccttggc gctgagcaac atcatgatga gtccaccgac 3541 ggcggtggtg gcgtcgggcg tcggagtggt ggacactttg ccgccgacgc cggcggccat 3601 gcagcccgag gtggcggcca cagcgacgtc gacggcggtg agcaacatga tcatcaaggc 3661 ggcggcggac tttataacca cgcaggagca ggaacaggag cagcataact accatcatcg 3721 cgtccattcg cattcgccgc aggcggccgt cggcgttagc ggcaatccgg cggagacggc 3781 ctcggatccg ctggtcaatc tgctgctgaa tcactcgagc acaccggaaa cagcggccgc 3841 agccgccgca gcggtggccg tggaggcggc caactttcag tcgatgggcc acagccacca 3901 cgccatgaat cacagccacc acgggcatag tcacagtcac ccccatagtc acagtcatgg 3961 tcaccatcat ggccaccatc atggccacca cttgccggtg gtgccgccga caccacaaga 4021 atctctgatc gtagcgctgg ccagcgagaa tgcgctgcaa aagtcggtgg ccaccgccgc 4081 ggtgaccacc aacggggcgg tgatgacgca gcaggcgtcg gcaccgaaca ccgccggcag 4141 catcctgccc gcggcggtgg gagcggtggc tgcggcggcc gccgtggcgg tacagccgcc 4201 cattccccag gagctgacca cgatgtcgga tcaggatttg atcagctaca tcaatccgag 4261 caccttcgat cagctttaaa cggcttcaga tcaacaaatt aaactacgtg gacttgtttt 4321 ttttttaatt aacaataaat gtcactccta cacaggctta gtcttaagta tatatgtagt 4381 atatagacac acacaaacac aaacacaaac gataaggttt catgtggacc aactttttga 4441 ccaagtggat ggtttaaaat cgggagaaga aagcgaaaaa accactaaca cacacacaca 4501 aacacacatt agtagctgta gctttgtttt tacatttagg aataaaccct accttatatg 4561 gaatacctac attta