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LOCUS XM_044396106 10068 bp mRNA linear INV 09-DEC-2024 ACCESSION XM_044396106 VERSION XM_044396106.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044396106.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..10068 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..10068 /gene="Pde9" /note="phosphodiesterase 9; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108056441" CDS 1350..5879 /gene="Pde9" /codon_start=1 /product="high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A" /protein_id="XP_044252041.1" /db_xref="GeneID:108056441" /translation="MYQDSGCSSSSSRRGSSSAAAATSAAAAATPATLATATTSSSDE ETLETLTIITTTITDSDIHATTTTTTVIAAAAAAATATIVASNTCNTCNTSDIEDSSP VEESEDSEECYREYIEIDCQTTAQEGSSPSGSSSSPSGGGNATGLLQRHSSNSNSNLQ QQQLQQLQLQQADVRLLRKIGYIASRVRCLAKFYGDFRLVNPYSARRQKRQLQEILLR HSIFDPGKEHQRAIVLAAATAAIAGPLAAIDCACATSSSLSLEAEVSSSEEQQQDHQQ QEEQDHQQEQEQEEEQYLPQEEQQIEAIAVTTTTATVRRKSSSSSTLSGGTAAVSVSV GGSVSVSASASVSATASQSFCAGSNIHLLEELLIQFYEEQDHRSSGNLTVIRQQQQHR ITNNNNNNNNNNCHSIRNNNNMSNPGGTTATATATVEQPATSSGAVTTTHLQPTAPSE GSDRSEPRRRRASDCSAVQAALQNQLHCITLKNNNCGKAALPFHRGSCGAAGEHLLAA NSIANRATIILSKSCSNVDGDVAAATTQQQAAAALKLGGSIRMRASATDIESTNNMTL NGASNNGNGNGNGNGNNGNNEYSILQLNNTIIQCHFNDDDFRALVKDLKRKVEYTERM NWLCLSKRPLGPPHRKSSLPKHQEVKRRFLEICDTTFSEEVRAALRLPAFDSYEWGDA DVIHLMQTMFVELGFIEKFSIPVDTLREWLYEVYKHYNEVPFHNFRHCFCVAQMMYAI TRQANLLSRLGDLECLILLVSCICHDLDHPGYNNIYQINARTELALRYNDISPLENHH CSIAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILATDMARHNEILTQFMEVTPIFD YSNRAHINLLCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQSAAEKSEGLPVTPF MDPDKVSKPGSQVRFIGLVLLPLFEALGELVPELTDLIIIPVRIALEYYRRLNDAQTK TRKSVADSNTSATSDSNSGTIDSNAAMVSTPGAASDKLSLDKAQGNSQGSGGGGGGGG GGGGAGGAGGTGSGGGGNSAAGSVSPQMPRSGSGISVKSRRSIPSQKSASRTSVDEPG GMAAELHDLPEGSESGDSETATEVDVAEKTSKFKVDTEGSSNRSKSSHSTSRKSSREK RPSMIGELCSSGGGQRIRNSYGNIHGYHSNRCHFGNNRAVSLDQYSSGGNNRRLSDGL PQVISDSNVFYGRHNRSSMETSGGVSGGGAVVGIPQDTNANTNHPQLKELLARTEADS EGESEEENEKKLMMLPLAVATTSSNGNISPPLVVTEQILPSNGSTRSSASSAAVPGGS GSGGGGGNGGGGAAGPSAGSSWKSRLRQFSDYFSFSFDKSNKRFGSTRSSPCPGSNSS SGRANNNANGLGESQEGGAGGGGKKPGMCCAIKGETGGGGGALTTVTTGNDAHQRHRA YSLDVPGMMRYSSNDSSRHPSNNTLQSAGGAGVAGTAGLAGGLEVTTTQRVPPSLSAE LGLASGSSSEAGPKI" misc_feature 3519..4205 /gene="Pde9" /note="3'5'-cyclic nucleotide phosphodiesterase; Region: PDEase_I; pfam00233" /db_xref="CDD:459723" ORIGIN 1 ttagcagcgt gaatatcgca ccggaatcaa gaaaactaaa gcaaatatcg gggataaaga 61 acaaatcgga actgctaccg ggcgttaatt atttaattga gttataaagt aataaatgat 121 cgaagtaaat cggataataa agttggtttt tttttgccat gtcaaaacta actaataaat 181 catttaaaca attaaatggg tcctacaaag tggccctgtt ctttgatatt aagcgcgtga 241 ggatttaaat attgaaaaaa aagacgggcc tttcttttat ttcaatttaa ataatataaa 301 ataatataat aattttttgt tgtttttgtt gagagtgcaa gcgaatgatc gagcagtgtg 361 tgtgtgtttg tgaggaagtt atagtttaat gttggttagc ttcaattgtc gagcaacaca 421 acacaaaaaa aaagaaaaat acaaattata cagcagcgca gcaacaacaa aagcaaaaac 481 aacaactaca aagtgatgct gattgatgtc acacacacca cgagaaacag aaaaaaaatt 541 atcaccttga agggctttat caactttagc cagcacataa agatgttatc ttggagaacc 601 gtttagaggc gagcttgtga acaatttcca atactacaga ttttgccgag cacaccgaaa 661 acggaaacgg aagtgacgcc caggggaaga ggaaaaggaa gaaggagagg aaggagagga 721 aggagaaggg gaagaggaag aaggagcagc gcaggaggac aaacggctga ataatgcaaa 781 ttaaaacaca ataaaatgta aaacacacaa atgacaagca gagcgaagca gagaaaatag 841 cgaaaagcga atcggttgac atgccgaaaa gaaatgcgag tggcggcaac ttttccactg 901 aattgatttg atttcaacgc gacggcggca tacggagcgt atgcgcgata cgtatacgcg 961 atacgtatac gcgatatata catacatata tatagagcga cgagggatgg cggatgaaaa 1021 tttgcataac tttgctggcg tggcataaac atcaaaaaag caaattgcaa gtaacaagta 1081 acaaaaggga agcagcaacg gtcataaaaa cggcgccagc ctcgtaaaaa tacgtaaaaa 1141 tcctgcaatt tcctcgtcct ctgcgtgaaa attaatttat gcagcaaatc aaatacgaat 1201 agggaagaaa tataaaagta atcgccaggc cgtaacaatt aagacagttg agaagaacac 1261 gagctgcagt caaaaaaaaa caagaaagcc aggaaaatca ggaaaattaa gaaaatctga 1321 aaaaaagagt tagcaagggt tgcttataaa tgtaccagga cagcggctgc agcagcagta 1381 gcagtcgacg cggcagcagc agtgcagcag cagcaacatc tgcagcagca gcagcaacac 1441 ctgcaacact tgcaacagca acaaccagca gcagcgacga ggaaacgctc gaaactctga 1501 ccattataac gaccaccatc accgacagcg atatccatgc gacgaccaca accacgacgg 1561 ttatagcggc ggcggcagca gcagcaacag cgacaatagt tgccagcaac acctgcaaca 1621 cgtgcaacac cagcgacatc gaggacagca gtccggtgga ggagagcgag gacagcgagg 1681 agtgctaccg cgagtatatc gagatcgatt gccagacgac cgcccaggag ggcagctccc 1741 ccagcggcag cagcagctcc cccagcggcg gtggcaatgc aaccggcttg ctgcaacgcc 1801 acagcagcaa cagcaacagc aacctacagc agcaacagtt gcaacagttg cagctgcagc 1861 aggcggacgt gcgtttgttg cgaaaaatcg gctatattgc gtcgcgtgtg cgctgcctgg 1921 ccaaattcta cggcgacttt cgcctggtga atccctacag cgcccggcgg caaaagcggc 1981 agctgcagga gatcctgctg cgccactcga tcttcgatcc cggcaaggag caccagcggg 2041 cgattgtctt ggcggcggca acggcggcca tagccggtcc actggcggcc atcgattgcg 2101 cctgcgcgac cagcagcagc ctgagcttgg aggcagaggt gagcagcagt gaggagcagc 2161 agcaggatca tcagcagcag gaggagcagg atcatcagca ggagcaggag caggaggagg 2221 agcagtatct tccgcaggag gagcagcaga ttgaagcgat tgccgtcacc accaccacgg 2281 ccactgtgcg ccggaagtcg tcgagcagct ctactttaag cggcggcaca gcggccgttt 2341 ccgtttccgt tggcggttcc gtttccgtct ccgcctccgc ttccgtttcc gccaccgcct 2401 cgcagtcctt ttgcgccggc agcaacatcc atctgctcga ggagctgctc attcagttct 2461 acgaagagca ggatcatcgc agcagcggca atctaacggt catcaggcag cagcagcagc 2521 acaggatcac caataacaac aataataata acaataacaa ttgccacagc atacggaaca 2581 acaacaacat gtcgaatcca ggcggaacaa cggcaacggc aacggcaacc gttgaacaac 2641 ctgccacctc gagtggtgct gttaccacca cccacttgca acccaccgcc ccctcagagg 2701 gcagcgatcg cagcgaaccg cgacgtcggc gggccagcga ctgctcggcg gtacaggcgg 2761 cgctccagaa tcagctgcac tgcattacgc tgaagaacaa caactgcggc aaggcggcgc 2821 tgccctttca tcgcggcagc tgcggcgccg ccggcgaaca tctgctggcc gccaattcca 2881 tagccaatcg ggccaccatc atactgagta aatcttgcag taatgtcgac ggtgatgtgg 2941 cggcggccac cacacaacaa caggcggcgg cggccctcaa gctgggcggc agtattagga 3001 tgcgggccag tgccaccgac attgagtcga cgaacaacat gaccttgaat ggcgcctcga 3061 ataacggaaa tgggaatggg aacggtaacg ggaataatgg caacaacgag tacagcatcc 3121 tgcagctgaa caacacgatc atccagtgcc acttcaacga cgacgacttt cgcgctctgg 3181 tcaaggacct caagcgcaag gtcgagtaca cggagcgcat gaactggcta tgtctctcca 3241 agcgaccgct gggcccgccg catcgtaaaa gcagtctacc aaagcatcag gaggtgaagc 3301 gccgcttcct ggaaatttgt gatacgacct tctcggagga ggtgagggcc gccctgcgcc 3361 tgccggcctt cgactcttac gagtggggcg acgccgacgt catccaccta atgcagacca 3421 tgttcgtcga gctgggcttc atcgagaagt tcagcattcc ggtggacacg ctgcgcgaat 3481 ggctctacga ggtctacaag cactacaacg aggtgccctt ccacaacttt cggcactgct 3541 tctgcgttgc ccaaatgatg tatgccataa cgcgccaggc gaatctgctt agccgcctgg 3601 gcgacctgga gtgtctgatc ctgctggtgt cctgcatctg ccacgacctc gaccatcccg 3661 gctacaacaa tatctaccag atcaacgccc gcaccgagct ggctctcaga tacaatgaca 3721 tctcaccgct ggagaaccac cattgttcga tagcgttccg cctgctggag catcccgaat 3781 gcaatatatt caagaacttc agccgcgaca ccttcaataa cattcgcgag ggcatcatcc 3841 ggtgcatttt ggccacggac atggcccgtc acaatgagat cctcacccag tttatggagg 3901 taacgcccat tttcgactac agcaaccgtg cgcacatcaa cttgctctgc atgatcctaa 3961 taaaggtggc ggacatctcg aacgaggcgc gacccatgga cgtggccgag ccctggctgg 4021 accgcctgct ccaggagttc ttcgcccaga gtgccgccga gaagtccgag ggcctgcccg 4081 tgacgccctt catggacccc gacaaggtca gcaagccggg ctcgcaggtc cgcttcatcg 4141 gactcgtcct cctgccgctg ttcgaggccc tcggcgaact ggtgccggag ctcaccgacc 4201 tcatcatcat acccgtgcgc atcgccctgg agtactacag gcgcctcaac gatgcccaga 4261 ccaagacgcg caaatcggtg gcggacagca acacgtcggc gacctcggac agcaacagcg 4321 gcaccatcga ctcgaatgcg gcgatggtca gcaccccggg ggcggccagt gacaagctga 4381 gcttggacaa ggcccagggc aattcgcagg gctccggcgg cggcggcggc ggcggcggcg 4441 gcggaggagg agccggcggg gcaggaggca ctggatcagg aggcggcggc aacagtgccg 4501 ccggcagcgt ctcgccacag atgccgcgat ccggctcggg gatcagtgtg aagtcgcgac 4561 gcagcattcc ctcacagaag tccgcctcga ggacgtccgt cgatgagccc ggcggcatgg 4621 cggcggagct ccacgatctg cccgagggca gcgagagcgg cgactcggaa acggccaccg 4681 aagtggatgt ggccgagaag acgtccaagt tcaaggtgga cacggagggc agcagcaacc 4741 gcagcaagtc ctcgcactcg acttcccgca agtcgtcgcg cgagaagcga ccctcgatga 4801 tcggcgagct gtgcagcagc ggcggcggcc agcggatccg caactcgtac gggaacatcc 4861 acggctacca cagcaacagg tgtcacttcg gcaacaaccg ggcggtcagc ctggatcagt 4921 acagcagtgg cggcaacaat cgccgcctct cggacggatt gccgcaggtc atctcggaca 4981 gcaatgtttt ctacggccgc cacaatcgca gcagcatgga gacctccggt ggtgttagtg 5041 gtggtggtgc agtggttggc attccgcagg acaccaatgc caatacgaat catccccagc 5101 taaaggagct gctggcccgc accgaggcgg attcggaggg tgagagcgag gaggagaacg 5161 agaagaagct gatgatgttg ccgctggccg tggccaccac ctcatcgaat ggcaatatat 5221 cgccgcccct ggtggtcacc gagcagatcc tgcccagcaa tggcagcaca cgtagcagtg 5281 ccagcagcgc tgcagtgcct ggaggatctg gatctggagg aggtggagga aacggtggcg 5341 gaggagccgc aggaccctcg gctggcagct cctggaaatc gagactgcgc cagttctccg 5401 attactttag cttcagcttc gacaagagca acaagcgctt cggcagcact cgcagcagtc 5461 catgtcccgg ctccaattcc agttcgggca gggccaacaa caatgccaat ggcttgggcg 5521 aaagtcaaga gggcggagca ggaggaggag gcaaaaagcc gggcatgtgc tgcgccatca 5581 agggtgagac tggaggcgga ggaggagccc tgaccaccgt gaccaccggg aatgatgccc 5641 atcagcgcca tcgcgcctac agcctcgatg ttcccggcat gatgcgatac tcctccaacg 5701 acagcagtcg ccatcccagc aacaacaccc tgcagagtgc aggaggagct ggggtagctg 5761 gaaccgcagg attagccggc ggattagagg tcaccaccac ccagcgagtg ccgcccagtt 5821 tgagtgcgga attgggcctg gccagcggat cgtcgtcaga ggcgggccca aagatttgac 5881 aacaggggag cagcagggag gattcggcgg cagtggccat tagcagggac gtcgaggagg 5941 aggagcctga ggagccggag gaggaggacg gggacgggca ggaggagcac cgtcatctgc 6001 atcatcagga tgcctcgtcc agttgcgagg tatcctccat gtcgatgacc gtgtggtcgg 6061 cgattggcca acgtttgaac gccctcgtct gtcattgctg cgagcgcaaa ttgccagagc 6121 cggaaaatgt ctaagtgaag tgagggaaat accaccccaa gttactatac cacccccttc 6181 tgtaccacct cccttggcag ctggaggttc gttggcctgg tagctaagtt taagcctagc 6241 ccttaactat tcgcattaag cttcagattt tactctcttg ttttgttttt ttttttttct 6301 tattttatat ttccctcttg tttacctctt aagtattttt atttatgtac acgcgcatac 6361 acacacaaat atatacataa tattattatt aattgcattt atttcgcgtg gatagaatcc 6421 atagaaagca aatggaacta gtatttattt caatcttttt atttgcttat atcaatattt 6481 aaggcgatga aggaccgaac agagcacaat gattttttta caacgttaga aggtgttttt 6541 aattgatata tagtacttcg cacactgtag tgtgatgcca ctggcgcccg aacagggtcc 6601 gcaagaaaat ttcaaatact atcgagtaaa tgttcaaatt tcctaactga aatgccgctt 6661 acggaattcg taaatattta atccacttgt atgatctctt ccagaaccat gagagtgccg 6721 aaagctaatg aatggtaaaa tgggaattcc agagataatt aagtttggta ataggtcaaa 6781 tgcattcagt tgttcccgag gaacatggcg ttgattttgc tggagcccgg gaattccttg 6841 ccattctcga ctcccccgaa tcgatttccc atgcagctga acgggccgga aagcaatgcg 6901 atttggatgt cagagccgaa aaacagttgg ccttcgccgg tttcgatccg attcgctccg 6961 ttctcatgcg aaattcacgt ctaattacgc aaaacaaatt tcgccaactg caatggatgc 7021 atatatgcaa caggcaggag ttttattcgc tgttcgttgg gtcccagtcg cctaattcca 7081 tttgcttgta gctcgttccc cttttttttt tgccattttt ttcggtgtcc gctggttggg 7141 attttccacg tgggaggaaa gtcgctgcag cgggatgccc gcaggagcaa ccatgttcca 7201 tggccagtca attggatttc gccgccgcag ctgtgctgat gatgacgctg gtggcagcac 7261 tcaattagaa ggcactgtgg gagctgaaat tctttcgatt atgcgcgatt tttcggctgc 7321 tatggagagt ggggagattt tggggcttta aaatgaaaaa tgagaaaatc cttcgggatg 7381 atgaaaataa atatcaattt gcattcgata ttaaaaacga gatttgaggc caactgcatt 7441 cacatatcgc agaaaagtgc agaaaatata taagaaaccc aagttaatta tgatcaatgt 7501 aaatttctgt atgtaattat gttaaatata gctaaactca gacacacaca cacacactga 7561 aactttgatt ggcaaaggca gaagtttgat tcaattacga tatggcaaca cacagagaaa 7621 aagaagagcc aaaataatga agttatgaga tatattatgg ataaagaaga ggcgagacca 7681 agctggtcct tggatacaga taaagataca gttacatcta cggatgcagt tataaagagt 7741 tgcatgtgtt ttttttgaat gtgtgtaatt aagcgagcac taattgagcg ttcaattcaa 7801 tagaggagtt aagatgaata cttattcggt gtacatttgg gtgtctagca aatcgcagca 7861 aatactctta aaactaactg tgcattgtaa ttgcaagctg cagcatattt agatgtgtac 7921 gtgtcacttt ctctctaagt tgtaagtcat taagtaattt atatatatat tattgaatat 7981 atataaacca gatcgcatct gtggtgtatg cccaaactaa ttaattctct gcgtgtggtc 8041 tccccgctcg ttgtgtgttt ttctgtagtt agatttgaaa ctatctgcct aatgataagt 8101 tcatcgaatg cattcgtgta tgtaccttcc agtcctcgcc ccccagttac cccggttttc 8161 tgtcagtgta gttgcttgga ctgagcaaga cactaacgta gacatggcgc ccgaacaggg 8221 actgcaggtg catatacgca ccacgatcaa ctagcaaaat ggaaaatgat tacaaactaa 8281 atcccctgat ggctaactct tagacctaag actctaacct aaacgaacca ctctaaatta 8341 gctaacacat caaattgatt tgttgcctta tacaactatt acaactactg tactgtgggt 8401 tggctttccc ccgagaaact catccacaat cgtcactgcg ttttatattg ttcatgccac 8461 caacttccct tgtttgaatg acaaaacaaa aagactaaaa cttgaattta aacaaaatca 8521 acaaaaacaa aaaaaaccaa aaaagaaaaa gtaaaccaaa caaagaactt tccaacaaaa 8581 ccaactatac atatacatta aaatatatat atatatacat aaatatttgt cttaaagata 8641 ctacaactac aacaaatcat aaaaagaact ctaggtgttt tacaaatgta taaaacaaaa 8701 caaaaaacga caactaagcc caaaaaccaa atgtaaacaa ttttaagcat aactaaacta 8761 gtttagagcc catgctaaaa acaaaaacgc aaagcaagcc atttcttggc caaaacctaa 8821 aaaggatgaa taaatttgac aggccgaaaa tgaaaatgtc cttgcaatgg agcactagat 8881 atccataatt cattcaaatg accaagtttt tcagccgaaa taacagtttt taatgattga 8941 ttgattcact cgttacaatt tatctcaaca tattgcgata agatattctt taaataataa 9001 tgacgacaat aggtgaatat cttatagaca aataatatgt ttggatcata atttccacct 9061 aaagccattc aattaaaata aaactatatt tgttaaagtc cgagttacat tttaaaataa 9121 cctgaactaa cacgatagga ataacatttt attgaaatgt tttttatttt gtcaagataa 9181 acctacataa cgtataattc gaaggaagaa acaaaatagt ttggctcaca ttaggatttc 9241 caaatcgata tgttatcgat atacttgcca aacattgggc gacttgcagg ggcattcttt 9301 tcgcttttcg gcaatcacgt aaataattag tgtacttttt ggcagtcaat taaatgcatc 9361 ccccttccga aagttggttg aatgatatgt gggagagatc gataagccgg ataagatccg 9421 atagcgatag atcgatagag cgaacaagtt ccaaggacaa atgcttgttc gtacctaagc 9481 aaatatttag gatatgagca atttggacca acttgactag accccaacat ttacccattg 9541 ctttcctagc ccccagcagc tacatgttta tgtgtaagtg tatgtgcaaa acgataacga 9601 tagcgatacc gattacgatt acgaatccac agacacaccg acacggacac agatacaaat 9661 acaaatacaa aagtcttagt atgcagttca acgtatgtaa caatctcgta ggtctaaacc 9721 acaactacct gtcgacttac cgatctagat cgagatcagc aatatcagca aaaaaaaaaa 9781 tataaaaaaa ggaagcggac tagaggaaga ctacaagcgg gacagtggga atggaattaa 9841 agaaacgcta gaaacggaac cgtaaccgca tgcatcttac tttatacttt tctacgtgac 9901 ttacaaactc gagctggaga cgaaaaacaa ctagaaaact aaaaataaac ttcctaaacg 9961 gtttccacac aaacacaagc ctaccacacg aacacacaca ccctcaaatc caagcacaca 10021 aacgcaactc tgtcaatgag aaagtcgctg gggaaaagtg taatttct